Application of AFLP for taxonomic and epidemiological studies of Photobacterium damselae subsp. piscicida.

abstract：:A novel anaerobic, Gram-stain-negative, endospore-forming bacterium, designated strain MLFW-2T, was isolated from anoxic sediments collected from the drainage area of a geothermal spring near Mono Lake, CA, USA. Optimal growth was achieved at 34 °C and pH 8.25-8.50 in medium containing 0.75 % (w/v) NaCl. Catalase, but...

journal_title：International journal of systematic and evolutionary microbiology

authors： Abin CA,Hollibaugh JT

更新日期：2017-04-01 00:00:00

abstract：:A novel actinomycete, strain S187(T), was isolated from a marine sediment sample collected from Xinghai Bay, Dalian, China. Growth occurred on ISP medium 2 containing 0-9 % NaCl and at pH 6.0-9.0 and 10-45 degrees C. The cell wall of strain S187(T) contained the isomer ll-diaminopimelic acid as the diagnostic diamino ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhao XQ,Li WJ,Jiao WC,Li Y,Yuan WJ,Zhang YQ,Klenk HP,Suh JW,Bai FW

更新日期：2009-11-01 00:00:00

abstract：:A novel actinobacterial strain, designated Z1027T, was isolated from a soil sample collected near the Tuotuo River, Qinghai-Tibet Plateau (China). The strain exhibited antibacterial activity against Escherichia coli and Staphylococcus aureus. The taxonomic position of strain Z1027T was determined using a polyphasic ap...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang B,Tang S,Chen X,Zhang L,Zhang G,Zhang W,Liu G,Chen T,Li S,Dyson P

更新日期：2016-12-01 00:00:00

abstract：:A pure culture of an actinobacterium previously described as 'Candidatus Rhodoluna lacicola' strain MWH-Ta8 was established and deposited in two public culture collections. Strain MWH-Ta8(T) represents a free-living planktonic freshwater bacterium obtained from hypertrophic Meiliang Bay, Lake Taihu, PR China. The stra...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahn MW,Schmidt J,Taipale SJ,Doolittle WF,Koll U

更新日期：2014-09-01 00:00:00

abstract：:A polyphasic taxonomic study was performed on the type strain of Bacillus thermosphaericus DSM 10633T and three related soil isolates. On the basis of phenotypic characteristics, chemotaxonomic profiles and phylogenetic data a new genus, Ureibacillus gen. nov., is proposed for the strains in the Bacillus thermosphaeri...

journal_title：International journal of systematic and evolutionary microbiology

authors： Fortina MG,Pukall R,Schumann P,Mora D,Parini C,Manachini PL,Stackebrandt E

更新日期：2001-03-01 00:00:00

abstract：:A mesophilic, obligately anaerobic, lactate-, alcohol-, carbohydrate- and amino-acid- degrading bacterium, designated strain 7WAY-8-7(T), was isolated from an upflow anaerobic sludge blanket reactor treating high-strength organic wastewater from isomerized sugar production processes. Cells of strain 7WAY-8-7(T) were m...

journal_title：International journal of systematic and evolutionary microbiology

authors： Qiu YL,Hanada S,Kamagata Y,Guo RB,Sekiguchi Y

更新日期：2014-06-01 00:00:00

abstract：:A Gram-negative, motile and oval- or rod-shaped bacterial strain, DS-43T, was isolated from soil from Dokdo, Korea, and its taxonomic position was investigated by using a polyphasic approach. The strain grew optimally at pH 7.0-8.0 and at 30 degrees C in the presence of 0.5 % (w/v) NaCl. Strain DS-43T had Q-8 as the p...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Kang SJ,Oh TK

更新日期：2006-04-01 00:00:00

abstract：:A polyphasic taxonomic study was carried out on strain EBR-4-2T isolated from a biofilm reactor in Korea. Cells of the strain were Gram-stain-positive, non-spore-forming, non-motile and rod-shaped. Comparative 16S rRNA gene sequence studies showed the clear affiliation of this strain to the Actinobacteria, and it had ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jin L,Ko SR,Lee CS,Ahn CY,Lee JS,Lee KC,Oh HM,Lee HG

更新日期：2017-05-01 00:00:00

abstract：:'Caulobacter leidyi' DSM 4733(T) has been shown to be affiliated with the family Sphingomonadaceae instead of the Caulobacteraceae, and due to its poor characterization has been omitted from the current edition of Bergey's Manual of Systematic Bacteriology and removed to limbo. We isolated a novel sphingoglycolipid-co...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen H,Jogler M,Rohde M,Klenk HP,Busse HJ,Tindall BJ,Spröer C,Overmann J

更新日期：2012-12-01 00:00:00

abstract：:A Gram-positive, non-motile, rod- or coccoid-shaped Microbacterium-like bacterium, designated strain DS-66(T), was isolated from soil of Dokdo, Korea, and its exact taxonomic position was investigated by using a polyphasic approach. Strain DS-66(T) grew optimally at 30 degrees C and pH 6.5-7.0 in the presence of 0.5-1...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Schumann P,Kang SJ,Lee CS,Lee SY,Oh TK

更新日期：2009-07-01 00:00:00

abstract：:A Gram-stain-negative, aerobic, non-motile and ovoid or rod-shaped bacterial strain, HSMS-29T, was isolated from a marine sand sample collected from the Yellow Sea, Republic of Korea. The neighbour-joining phylogenetic tree of 16S rRNA gene sequences showed that strain HSMS-29T fell within the clade comprising the typ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park S,Kim IK,Lee JS,Yoon JH

更新日期：2019-10-01 00:00:00

abstract：:Recent examination of the relationships of the dry necrosis-inducing (necrogenic) erwinias using 16S rDNA sequences demonstrated that these bacteria comprise a polyphyletic group and, therefore, have been subdivided into three distinct genera, Erwinia, Brenneria and Pectobacterium, with the classical 'amylovora' group...

journal_title：International journal of systematic and evolutionary microbiology

authors： Brown EW,Davis RM,Gouk C,van der Zwet T

更新日期：2000-11-01 00:00:00

abstract：:Here, we report on two novel sexual basidiomycetous red yeast species of the genus Cystofilobasidium. Cystofilobasidium lacus-mascardii sp. nov. is based on sexually compatible strains isolated from Lake Mascardi, an ultraoligotrophic lake in north-western Patagonia, Argentina. Following the discovery of the first iso...

journal_title：International journal of systematic and evolutionary microbiology

authors： Libkind D,Gadanho M,van Broock M,Sampaio JP

更新日期：2009-03-01 00:00:00

abstract：:A Gram-stain-negative, cream-pigmented, aerobic, non-motile, non-spore-forming and short-rod-shaped bacterial strain, designated CAU 1123T, was isolated from mud from reclaimed land. The strain's taxonomic position was investigated by using a polyphasic approach. Strain CAU 1123T grew optimally at 37 °C and at pH 7.5 ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shin YH,Kim JH,Suckhoom A,Kantachote D,Kim W

更新日期：2017-10-01 00:00:00

abstract：:An organism commonly referred to as 'megabacterium' colonizes the gastric isthmus of many species of birds. It is weakly gram-positive and periodic acid-Schiff-positive and stains with silver stains. Previous studies have shown that it has a nucleus and a cell wall similar to those seen in fungi. Calcofluor white M2R ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tomaszewski EK,Logan KS,Snowden KF,Kurtzman CP,Phalen DN

更新日期：2003-07-01 00:00:00

abstract：:The strictly anaerobic gram-negative bacterium strain Fru22T grows at 50 degrees C in media containing up to 75 g NaCl l(-1). Hexoses and pentoses are fermented to equal molar amounts of acetate, propionate and succinate, and no CO2 is formed. An orange-red pigment similar to flexirrubin is produced during stationary ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Denger K,Warthmann R,Ludwig W,Schink B

更新日期：2002-01-01 00:00:00

abstract：:This volume contains the edition of the International Code of Nomenclature of Prokaryotes that was presented in draft form and available for comment at the Plenary Session of the Fourteenth International Congress of Bacteriology and Applied Microbiology (BAM), Montréal, 2014, together with updated lists of conserved a...

journal_title：International journal of systematic and evolutionary microbiology

authors：

更新日期：2019-01-01 00:00:00

abstract：:A Gram-stain-negative, yellow-pigmented, non-spore-forming, non-motile, rod-shaped, catalase-positive, strictly aerobic bacterial strain, designated CAU 1491T, was isolated from seawater and its taxonomic position was examined using a polyphasic approach. Cells of strain CAU 1491T grew optimally at 30 °C, pH 7.5 and i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Janthra T,Baek J,Kim JH,Yoon JH,Sukhoom A,Kim W

更新日期：2020-08-01 00:00:00

abstract：:Various bacterial species in the genus Pasteuria have great potential as biocontrol agents against plant-parasitic nematodes, although study of this important genus is hampered by the current inability to cultivate Pasteuria species outside their host. To aid in the study of this genus, an extensive 16S rRNA gene sequ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Duan YP,Castro HF,Hewlett TE,White JH,Ogram AV

更新日期：2003-01-01 00:00:00

abstract：:A Gram-negative ultramicrobacterium (designated strain UMB49(T)) was isolated from a 120,000-year-old, 3,042 m deep Greenland glacier ice core using a 0.2 mum filtration enrichment procedure. Phylogenetic analysis of the 16S rRNA gene sequence indicated that this strain belonged to the genus Herminiimonas of the famil...

journal_title：International journal of systematic and evolutionary microbiology

authors： Loveland-Curtze J,Miteva VI,Brenchley JE

更新日期：2009-06-01 00:00:00

abstract：:Strain AH-1T, a Gram-negative, aerobic, non-spore-forming, motile, rod-shaped bacterium, was isolated from tetrabromobisphenol A-contaminated soil in China. The taxonomic position was investigated using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain AH-1T was a membe...

journal_title：International journal of systematic and evolutionary microbiology

authors： Mu Y,Jia WB,Ke Z,Zhuang W,Wang HM,Jiang JD,Chen K,Chen Q

更新日期：2018-08-01 00:00:00

abstract：:A novel Gram-positive-staining actinomycete designated strain GMKU095(T) was isolated from surface-sterilized roots of Acacia auriculiformis A. Cunn. ex Benth. (earpod wattle). The organism produced branching mycelium. The spores were non-motile and had a spiny surface. Growth of strain GMKU095(T) occurred at 18-42 de...

journal_title：International journal of systematic and evolutionary microbiology

authors： Duangmal K,Thamchaipenet A,Matsumoto A,Takahashi Y

更新日期：2009-06-01 00:00:00

abstract：:A Gram-stain-negative, strictly aerobic, non-motile, rod-shaped bacterial strain, THG-A18(T), was isolated from soil of Gwangju province in South Korea. Strain THG-A18(T) grew optimally at 25-30 °C, at pH 7.0-8.0 and in the absence of NaCl. Strain THG-A18(T) displayed β-glucosidase activity, which enabled it to conver...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park YJ,Son HM,Lee EH,Kim JH,Mavlonov GT,Choi KJ,Shin HS,Kook M,Yi TH

更新日期：2013-12-01 00:00:00

abstract：:Four rhizobia-like strains, isolated from root nodules of Pisum sativum and Vicia faba grown in Anhui and Jiangxi Provinces of China, were grouped into the genus Rhizobium but were distinct from all recognized species of the genus Rhizobium by phylogenetic analysis of 16S rRNA and housekeeping genes. The combined sequ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang YJ,Zheng WT,Everall I,Young JPW,Zhang XX,Tian CF,Sui XH,Wang ET,Chen WX

更新日期：2015-09-01 00:00:00

abstract：:A novel aerobic, non-spore-forming, non-motile, catalase- and oxidase-positive, Gram-stain-negative, coccoid to short-rod-shaped bacterial strain, designated YW11(T), was isolated from soil under long-term application of triazophos. The strain was able to hydrolyse triazophos. Strain YW11(T) grew at 15-40 °C (optimum ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen Q,Sun LN,Zhang XX,He J,Kwon SW,Zhang J,Li SP,Gu JG

更新日期：2014-04-01 00:00:00

abstract：:This study examined over 20 fungal specimens of the Orbiliaceae (Orbiliomycetes) from different regions in China. Our analyses based on morphological traits and the ITS rDNA sequences revealed two new Orbilia species with drechslerella-like asexual morphs. These new species are able to trap nematodes with constricting...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang Y,Qiao M,Baral HO,Xu J,Zhang KQ,Yu ZF

更新日期：2020-04-01 00:00:00

abstract：:Lactobacillus versmoldensis sp. nov. (KU-3T) was isolated from raw fermented sausages. The new species was present in high numbers, and frequently dominated the lactic acid bacteria (LAB) populations of the products. 16S rDNA sequence data revealed that the isolates are closely related to the species Lactobacillus kim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kröckel L,Schillinger U,Franz CMAP,Bantleon A,Ludwig W

更新日期：2003-03-01 00:00:00

abstract：:A Gram-negative bacterium, designated strain EMB71(T), was isolated from activated sludge used for enhanced biological phosphorus removal in a sequencing batch reactor. The cells of the isolate were facultatively aerobic, motile rods with single polar flagella. Growth was observed to occur at 15-35 degrees C (optimall...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chung BS,Ryu SH,Park M,Jeon Y,Chung YR,Jeon CO

更新日期：2007-05-01 00:00:00

abstract：:An oval- to rod-shaped, motile, Gram-stain-negative, oxidase-positive, catalase-negative, pink-coloured phototrophic bacterium (designated as strain JA968T) was isolated from an estuary near Pata, Gujarat, India. Cells had an intracytoplasmic membrane architecture as lamellae and divided by budding. Strain JA968T had ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Buddhi S,G S,Gupta D,Ch S,Ch V R

更新日期：2020-01-01 00:00:00

abstract：:A coccal-shaped organism, designated 516(T), was isolated from yan-tsai-shin (fermented broccoli stems), a traditional fermented food in Taiwan. 16S rRNA gene sequencing results showed that strain 516(T) had 98.9 % sequence similarity to that of the type strain Lactococcus garvieae NBRC 100934(T). Comparison of three ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen YS,Otoguro M,Lin YH,Pan SF,Ji SH,Yu CR,Liou MS,Chang YC,Wu HC,Yanagida F

更新日期：2014-01-01 00:00:00