Deinococcus budaensis sp. nov., a mesophilic species isolated from a biofilm sample of a hydrothermal spring cave.

abstract：:The translucent white-coloured, Gram-stain-negative, aerobic, non-motile, fusiform-shaped bacterium (designated strain SY72T) was isolated from waste-activated sludge. Optimal growth occurred at 30-37 °C and pH 6.0-7.0. Phylogenetic analysis based on the 16S rRNA gene sequences revealed that the novel isolate belonged...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ko DJ,Kim JS,Park DS,Lee DH,Heo SY,Seo JW,Kim CH,Oh BR

更新日期：2018-05-01 00:00:00

abstract：:One beige-pigmented, Gram-stain-negative, rod-shaped bacterium, strain E3/4T, was isolated from a zebrafish, Danio rerio. Phylogenetic analysis based on nearly full-length 16S rRNA gene sequences showed that the isolate shared 98.5 % 16S rRNA gene sequence identity to the type strain of Undibacterium macrobrachii and ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kämpfer P,Irgang R,Busse HJ,Poblete-Morales M,Kleinhagauer T,Glaeser SP,Avendaño-Herrera R

更新日期：2016-09-01 00:00:00

abstract：:Five strains representing a novel yeast species belonging to the genus Wickerhamomyces were independently isolated from Ecuador, Taiwan and the USA. One strain (CLQCA 10-161(T)) was isolated from the white flower of an unidentified plant species collected in the Maquipucuna cloud forest reserve, near Quito, in Ecuador...

journal_title：International journal of systematic and evolutionary microbiology

authors： James SA,Barriga EJC,Barahona PP,Harrington TC,Lee CF,Bond CJ,Roberts IN

更新日期：2014-03-01 00:00:00

abstract：:Peatlands are important sources of CH(4) emissions to the atmosphere and molecular surveys have identified a diverse, but mainly uncultured, euryarchaeal community in them. Characterization of a strain, E1-9c(T), associated with uncultured group E1, from a minerotrophic fen is reported. Cells were regular cocci, usual...

journal_title：International journal of systematic and evolutionary microbiology

authors： Cadillo-Quiroz H,Yavitt JB,Zinder SH

更新日期：2009-05-01 00:00:00

abstract：:A novel bacterium, designated TRM 44457T, belonging to the genus Streptomyces, was isolated from soil sampled in cotton fields in Xinjiang, PR China. Comparative 16S rRNA gene sequence analysis indicated that strain TRM 44457T was phylogenetically most closely related to Streptomyces laurentii LMG 19959T (99.38 % sequ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang QY,Liu CF,Wang Y,Xia ZF,Huang YJ,Luo XX

更新日期：2020-02-01 00:00:00

abstract：:An actinomycete strain 3-44-a(19)(T) was isolated from sandy soil collected in Bangladesh. The strain formed irregular pseudosporangia directly from aggregated spore chains above the rudimentary aerial mycelium. The pseudosporangia developed singly. Each pseudosporangium contained many small, non-motile, spherical, sm...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ara I,Matsumoto A,Bakir MA,Kudo T,Omura S,Takahashi Y

更新日期：2008-07-01 00:00:00

abstract：:The taxonomic position of a Gram-staining-positive strain, designated strain S4702T was isolated from a marine sediment collected from the southern Black Sea coast, Turkey, determined using a polyphasic approach. The isolate was found to have chemotaxonomic, morphological and phylogenetic properties consistent with it...

journal_title：International journal of systematic and evolutionary microbiology

authors： Veyisoglu A,Cetin D,Inan Bektas K,Guven K,Sahin N

更新日期：2016-11-01 00:00:00

abstract：:Strain CCP-7T, isolated from a freshwater pond in Taiwan, was characterized using a polyphasic taxonomy approach. Phylogenetic analyses based on 16S rRNA gene sequences and coding sequences of 92 protein clusters indicated that strain CCP-7T formed a phylogenetic lineage in the genus Sphingomonas. Strain CCP-7T was mo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sheu SY,Xie YR,Kwon SW,Sheu C,Chen WM

更新日期：2019-07-01 00:00:00

abstract：:Previously, analysis of 16S rDNA sequences placed a newly discovered lineage of bacterial symbionts of arthropods in the 'Bacteroidetes'. This symbiont lineage is associated with a number of diverse host reproductive manipulations, including induction of parthenogenesis in several Encarsia parasitoid wasps (Hymenopter...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zchori-Fein E,Perlman SJ,Kelly SE,Katzir N,Hunter MS

更新日期：2004-05-01 00:00:00

abstract：:Nine strains of haloalkaliphilic, obligately autotrophic, sulfur-oxidizing bacteria able to grow with thiocyanate (SCN-) as the sole energy and nitrogen source were isolated from soda lakes in South-East Siberia, Kenya and Egypt after enrichment on sodium carbonate minerals buffered at pH 10 with thiocyanate as the su...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sorokin DY,Tourova TP,Lysenko AM,Mityushina LL,Kuenen JG

更新日期：2002-03-01 00:00:00

abstract：:A coccal-shaped organism, designated 516(T), was isolated from yan-tsai-shin (fermented broccoli stems), a traditional fermented food in Taiwan. 16S rRNA gene sequencing results showed that strain 516(T) had 98.9 % sequence similarity to that of the type strain Lactococcus garvieae NBRC 100934(T). Comparison of three ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen YS,Otoguro M,Lin YH,Pan SF,Ji SH,Yu CR,Liou MS,Chang YC,Wu HC,Yanagida F

更新日期：2014-01-01 00:00:00

abstract：:Three strains of budding, ellipsoid-shaped and rosette-forming bacteria were isolated from acidic Sphagnum-dominated boreal wetlands of northern Russia and were designated strains MPL7T, MOB77 and SB2. The presence of crateriform pits and numerous fibrillar appendages on the cell surface and an unusual spur-like proje...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kulichevskaya IS,Ivanova AO,Belova SE,Baulina OI,Bodelier PLE,Rijpstra WIC,Sinninghe Damsté JS,Zavarzin GA,Dedysh SN

更新日期：2007-11-01 00:00:00

abstract：:Two bacterial strains, HKU50T and HKU46, were isolated in Hong Kong from the blood culture and the peritoneal dialysis effluent of two patients. The strains are Gram-stain-positive, acid-fast, non-motile, non-sporulating bacilli. They grow on Columbia agar with 5 % defibrinated sheep blood and brain-heart infusion aga...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tsang CC,Xiong L,Poon RWS,Chen JHK,Leung KW,Lam JYW,Wu AKL,Chan JFW,Lau SKP,Woo PCY

更新日期：2016-10-01 00:00:00

abstract：:Strain C4T, isolated from sea cucumber intestine in Weihai, Shandong, PR China, is a novel Gram-stain-negative, facultatively anaerobic, amphitrichously flagellated, short rod that grows as creamy white bacterial colonies on plates. Optimal growth of the strain was observed at 28-30 °C, pH 6.5-7.0 and at a concentrati...

journal_title：International journal of systematic and evolutionary microbiology

authors： Xia HF,Chen GJ,Du ZJ

更新日期：2019-08-01 00:00:00

abstract：:A Gram-stain-negative, strictly aerobic, rod- or oval-shaped, motile, non-spore-forming bacterium, designated strain CC-AMHB-3(T), was isolated from coastal surface seawater off Hualien, Taiwan. The novel strain showed high pairwise 16S rRNA gene sequence similarities to Ruegeria mobilis NBRC 101030(T) (96.5%), Rueger...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hameed A,Shahina M,Lin SY,Lai WA,Liu YC,Hsu YH,Young CC

更新日期：2014-11-01 00:00:00

abstract：:Several nocardioform actinomycetes were isolated from tufaceous surfaces with whitish-grey patinas in the catacombs of St Callistus in Rome, Italy. The morphology of the isolates and their chemotaxonomic characteristics such as LL-diaminopimelic acid in the cell-wall peptidoglycan, the major menaquinone of MK-9(H(4)),...

journal_title：International journal of systematic and evolutionary microbiology

authors： Urzì C,De Leo F,Schumann P

更新日期：2008-09-01 00:00:00

abstract：:During studies of the microbiota of human faeces, five strains of Gram-negative anaerobic rods were isolated following growth in a polyamine-deficient medium. These strains belonged to the genus Bacteroides on the basis of 16S rRNA gene sequence data. 16S rRNA gene sequence similarity between one of the strains, 341T,...

journal_title：International journal of systematic and evolutionary microbiology

authors： Bakir MA,Kitahara M,Sakamoto M,Matsumoto M,Benno Y

更新日期：2006-01-01 00:00:00

abstract：:One Gram-stain-negative, aerobic, motile bacterial strain, 3-7T, was isolated from symptomatic canker bark tissue of Populus × euramericana. 16S rRNA gene sequence data revealed that the novel isolate shared highest similarity with Sphingomonas panacis DCY99T (98.8 %), and <96.5 % sequence similarity with all other sp...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li Y,Bian DR,Chang JP,Guo LM,Yang XQ

更新日期：2020-02-01 00:00:00

abstract：:A novel hyperthermophilic, acidophilic and facultatively anaerobic archaeon, strain KD-1T, was isolated from an acidic hot spring in Indonesia and characterized with the phylogenetically related species Sulfurisphaera ohwakuensis Kurosawa et al. 1998, Sulfolobus tokodaii Suzuki et al., 2002 and Sulfolobus yangmingensi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tsuboi K,Sakai HD,Nur N,Stedman KM,Kurosawa N,Suwanto A

更新日期：2018-06-01 00:00:00

abstract：:Two bacterial isolates from the surface water of a haloalkaline lake on the Mongolia Plateau, strains MIM18(T) and MIM19, were characterized; their morphological, physiological and chemotaxonomic characters, and phylogenetic position based on 16S rRNA gene sequences, were determined. The two strains were alkaliphilic,...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yang CX,Liu YP,Bao QH,Feng FY,Liu HR,Zhang XJ,Zhao YL

更新日期：2012-03-01 00:00:00

abstract：:Six yeast strains isolated from olive oil sediments and spoiled olive oils originating from Slovenia and Portugal, respectively, proved to represent an undescribed yeast species based on DNA sequence comparisons. The analysis of gene sequences for internal transcribed spacer regions and the large subunit rRNA gene D1/...

journal_title：International journal of systematic and evolutionary microbiology

authors： Čadež N,Dlauchy D,Tóbiás A,Péter G

更新日期：2017-11-01 00:00:00

abstract：:Strain 06168H-1T was isolated from a fishpond sediment sample collected from the southern area of Taiwan, and a polyphasic approach was used to determine its taxonomic position. The isolate grew between 20-40 °C and 0-8 % (w/v) NaCl. It produced branched and unfragmented substrate mycelia. Short spore chains (3-10 spo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tseng M,Chiang WP,Liao HC,Hsieh SY,Yuan GF

更新日期：2018-05-01 00:00:00

abstract：:There is a need for easy, practical, reliable and robust techniques for the identification and classification of bacterial isolates to the species level as alternatives to 16S rRNA gene sequence analysis and DNA-DNA hybridization. Here, we demonstrate that multilocus sequence analysis (MLSA) of housekeeping genes is a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Martens M,Dawyndt P,Coopman R,Gillis M,De Vos P,Willems A

更新日期：2008-01-01 00:00:00

abstract：:Three novel bacterial strains, PVAS-1(T), B3W22(T) and B8W22(T), were isolated from cryotubes used to collect air samples at altitudes of between 27 and 41 km. Based on phenotypic characteristics, chemotaxonomic features, DNA-DNA hybridization with the nearest phylogenetic neighbours and phylogenetic analysis based on...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shivaji S,Chaturvedi P,Begum Z,Pindi PK,Manorama R,Padmanaban DA,Shouche YS,Pawar S,Vaishampayan P,Dutt CB,Datta GN,Manchanda RK,Rao UR,Bhargava PM,Narlikar JV

更新日期：2009-12-01 00:00:00

abstract：:A novel cold-tolerant bacterium, designated strain YJ56T, was isolated from Antarctic soil collected from the Cape Burk area. Phylogenetic analysis through 16S rRNA gene sequence similarity revealed that strain YJ56T was most closely related to the genus Pseudarthrobacter, including Pseudarthrobacter oxydans DSM 20119...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shin Y,Lee BH,Lee KE,Park W

更新日期：2020-12-01 00:00:00

abstract：:Five brightly red-pigmented, motile, rod-shaped, extremely halophilic bacteria were isolated from saltern crystallizer ponds in Alicante (two strains) and Mallorca (three strains), Spain. They grew optimally at salt concentrations between 20 and 30% and did not grow below 15% salts. Thus, these isolates are among the ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Antón J,Oren A,Benlloch S,Rodríguez-Valera F,Amann R,Rosselló-Mora R

更新日期：2002-03-01 00:00:00

abstract：:Previously, 22 aerobic Gram-negative bacteria were isolated from biofilms growing on granules of the synthetic polyester poly(epsilon-caprolactone); the granules were used as a fixed bed in a denitrification reactor. All the strains showed similar fatty acid profiles. The 16S rRNA gene sequences of five strains were p...

journal_title：International journal of systematic and evolutionary microbiology

authors： Mergaert J,Cnockaert MC,Swings J

更新日期：2003-11-01 00:00:00

abstract：:A novel Gram-stain-negative, curved rod-shaped, 0.5-0.7 µm wide and 3.0-10.0 µm long, non-motile bacterium, designated strain AK53T, was isolated from a 5 m depth water sample collected from the Bay of Bengal, Visakhapatnam, India. Colonies on marine agar were circular, small, dark orange, shiny, smooth, translucent, ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sidhu C,Saini MK,Srinivas Tanuku NR,Pinnaka AK

更新日期：2021-01-27 00:00:00

abstract：:A novel acidobacterial strain, Sakura1(T), was isolated from pieces of cherry bark. Cells of strain Sakura1(T) were non-motile, rod-shaped and stained Gram-negative. This strictly aerobic isolate was mesophilic but was able to grow at temperatures as low as 10 °C. Colonies were pink due to production of carotenoids, a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yamada K,Okuno Y,Meng XY,Tamaki H,Kamagata Y,Hanada S

更新日期：2014-08-01 00:00:00

abstract：:Phylogenetic analysis of the genera within the suborder Pseudonocardineae based on almost complete sequences of 16S rDNA showed that Saccharothrix cryophilis NRRL B-16238T was misplaced within the genus Saccharothrix. Saccharothrix cryophilis NRRL B-16238T appeared to be phylogenetically closest to Streptoalloteichus,...

journal_title：International journal of systematic and evolutionary microbiology

authors： Labeda DP

更新日期：2001-07-01 00:00:00