Nonomuraea nitratireducens sp. nov., a new actinobacterium isolated from Suaeda australis Moq. rhizosphere.

Abstract:

:A novel actinomycete, designated WYY166T, was isolated from the rhizosphere of Suaeda australis Moq. collected in Dongfang, PR China. The taxonomic position of this strain was investigated using a polyphasic approach. Phylogenetic analysis based on its 16S rRNA gene referred strain WYY166T to the genus Nonomuraea, and it was most closely related to the type strains Nonomuraea candida HMC10T, Nonomuraea turkmeniaca DSM 43926T, Nonomuraea maritima NBRC 106687T and Nonomuraea polychroma DSM 43925T (98.35, 97.60, 97.36 and 97.30% sequence similarity, respectively). Genome sequencing revealed a genome size of 11.27 Mbp and a G+C content of 71.10 mol%. The genome average nucleotide identity (ANI) values and the digital DNA - DNA hybridization (dDDH) values between strain WYY166T and the other species of the genus were found to be low (ANI 81.63~85.23 %, dDDH 23.6~31.6 %), suggesting that it represented a new species. The physiological evaluation showed that it had remarkable nitrate reduction activity. The whole-cell hydrolysates contained meso-diaminopimelic acid and madurose. The N-acyl type of muramic acid was acetyl. The major menaquinones were MK-9 (H4) (86.9 %) and MK-9 (H2) (13.1 %). The predominant fatty acids were iso-C16 : 0 (53.2 %), 10-methyl C17 : 0 (10.7 %), C17 : 1 ω6c (8.3 %) and iso-C16 : 1 h (7.3 %). These physiological, biochemical and chemotaxonomic data suggested that strain WYY166T should be classified as representing a novel species of the genus Nonomuraea, for which the name Nonomuraea nitratireducens sp. nov. is proposed. The type strain is WYY166T (=MCCC 1K03779T=KCTC 49343T).

authors

Ou Y,Sheng Y,Hu X,Leng D,Huang J,Hu Z,Bai L,Deng Z,Kang Q,Wu Y

doi

10.1099/ijsem.0.004377

subject

Has Abstract

pub_date

2020-09-01 00:00:00

pages

5026-5031

issue

9

eissn

1466-5026

issn

1466-5034

journal_volume

70

pub_type

杂志文章
  • Aliidiomarina sedimenti sp. nov., a haloalkaliphilic bacterium in the family Idiomarinaceae.

    abstract::A novel Gram-staining-negative straight or curved rod-shaped, moderately halophilic and alkaliphilic bacterium, designated strain GBSy1T, was isolated from a sediment sample from the coastal-marine wetland Gomishan in Iran. GBSy1T was motile, and formed non-pigmented, mucoid colonies. Growth occurred with between 1 an...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001772

    authors: Shahinpei A,Amoozegar MA,Shahzadeh Fazeli SA,Schumann P,Spröer C,Ventosa A

    更新日期:2017-07-01 00:00:00

  • Erythrobacter lutimaris sp. nov., isolated from a tidal flat sediment.

    abstract::A Gram-stain-negative, non-motile, coccoid- or oval-shaped bacterial strain, designated S-5(T), belonging to the class Alphaproteobacteria, was isolated from a tidal flat sediment of the Yellow Sea, Korea and was subjected to a polyphasic taxonomic study. Strain S-5(T) grew optimally at pH 7.0-8.0, at 30 °C and in the...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.067728-0

    authors: Jung YT,Park S,Lee JS,Yoon JH

    更新日期:2014-12-01 00:00:00

  • Mitsuokella jalaludinii sp. nov., from the rumens of cattle in Malaysia.

    abstract::Five strains of phytase-producing, gram-negative, non-spore-forming, non-motile, small, stout, rod-shaped, strictly anaerobic, fermentative bacteria were isolated from the rumens of cattle in Malaysia. All five strains had morphological, physiological and biochemical features in common. Although these strains had many...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-3-713

    authors: Lan GQ,Ho YW,Abdullah N

    更新日期:2002-05-01 00:00:00

  • Caenispirillum salinarum sp. nov., a member of the family Rhodospirillaceae isolated from a solar saltern.

    abstract::A novel Gram-negative, vibrio-shaped, motile bacterium, designated strain AK4(T), was isolated from a sediment sample collected from a solar saltern at Kakinada, Andhra Pradesh, India. Strain AK4(T) was positive for oxidase, urease and DNase activities but negative for gelatinase, catalase, ornithine decarboxylase, ly...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.035287-0

    authors: Ritika C,Suresh K,Anil Kumar P

    更新日期:2012-07-01 00:00:00

  • Kineococcus radiotolerans sp. nov., a radiation-resistant, gram-positive bacterium.

    abstract::A gram-type positive, motile, coccus-shaped organism was isolated from a radioactive work area. Strain SRS30216T is an orange-pigmented bacterium that is catalase-positive, oxidase-negative and urease-negative. The orange pigment is most likely a carotenoid with absorption peaks at approximately 444, 471 and 501 nm. C...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-3-933

    authors: Phillips RW,Wiegel J,Berry CJ,Fliermans C,Peacock AD,White DC,Shimkets LJ

    更新日期:2002-05-01 00:00:00

  • Hymenobacter xinjiangensis sp. nov., a radiation-resistant bacterium isolated from the desert of Xinjiang, China.

    abstract::A Gram-negative, non-motile, rod-shaped and pink-pigmented bacterium, designated strain X2-1g(T), was isolated from a mixture of sand samples collected from the desert of Xinjiang, China, after exposure of the sand to 8 kGy gamma radiation. Phylogenetic analysis based on 16S rRNA gene sequencing indicated that this is...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65033-0

    authors: Zhang Q,Liu C,Tang Y,Zhou G,Shen P,Fang C,Yokota A

    更新日期:2007-08-01 00:00:00

  • Moraxella porci sp. nov., isolated from pigs.

    abstract::Nine Gram-negative, catalase- and oxidase-positive, coccus-shaped bacteria were isolated from pigs affected by different pathological processes. Phenotypic and genotypic methods were adopted to determine the relationships of these new isolates to recognized species of the genus Moraxella. Analysis of the 16S rRNA gene...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.016626-0

    authors: Vela AI,Sánchez-Porro C,Aragón V,Olvera A,Domínguez L,Ventosa A,Fernández-Garayzábal JF

    更新日期:2010-10-01 00:00:00

  • Metallosphaera tengchongensis sp. nov., an acidothermophilic archaeon isolated from a hot spring.

    abstract::Two novel acidothermophilic archaea, strains Ric-A(T) and Ric-F, were isolated from muddy water samples of a sulfuric hot spring located in Tengchong County, Yunnan Province, PR China. The strains were aerobic and facultatively chemolithoautotrophic. Both strains could oxidize S(0) and K2S4O6 for autotrophic growth, a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.070870-0

    authors: Peng TJ,Liu LJ,Liu C,Yang ZF,Liu SJ,Jiang CY

    更新日期:2015-02-01 00:00:00

  • Atopobium deltae sp. nov., isolated from the blood of a patient with Fournier's gangrene.

    abstract::A Gram-stain-positive, obligately anaerobic, short rod, designated strain HHRM1715(T), was isolated from the blood of a patient with Fournier's gangrene, complicated by sepsis. On the basis of 16S rRNA gene sequence analysis, strain HHRM1715(T) was shown to belong to the genus Atopobium and was most closely related to...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.065243-0

    authors: Cools P,Oyaert M,Vaneechoutte M,De Laere E,Vervaeke S

    更新日期:2014-09-01 00:00:00

  • Lactobacillus metriopterae sp. nov., a novel lactic acid bacterium isolated from the gut of grasshopper Metrioptera engelhardti.

    abstract::A strain (Hime 5-1T) of lactic acid bacterium was isolated from the gut of the grasshopper Metrioptera engelhardti from a mountainous area of Nagano Prefecture, Japan. Strain Hime 5-1T had a low 16S rRNA gene sequence similarity to known lactic acid bacteria, with the closest recognized relatives being Lactobacillus t...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002694

    authors: Chiba M,Itabashi T,Hirai K,Sakamoto M,Ohkuma M,Ishige T,Kawasaki S

    更新日期:2018-05-01 00:00:00

  • Aeromicrobium terrae sp. nov., isolated from a maize field.

    abstract::A polyphasic taxonomic approach was used to characterize a Gram-stain-positive bacterium, designated strain CC-CFT486T, isolated from soil sampled in a maize field in Taiwan. Cells of strain CC-CFT486T were short rods, motile with polar flagella, catalase-positive and oxidase-positive. Optimal growth occurred at 30 °С...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004616

    authors: Lin SY,Tsai CF,Hameed A,Young CC

    更新日期:2021-01-05 00:00:00

  • Enterococcus camelliae sp. nov., isolated from fermented tea leaves in Thailand.

    abstract::A Gram-positive and catalase-negative coccus that formed chains, strain FP15-1(T), isolated from fermented tea leaves ('miang'), was studied systematically. The strain was facultatively anaerobic and produced l-lactic acid from glucose. Demethylmenaquinone (DMK-7) was the major menaquinone. Straight-chain unsaturated ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65109-0

    authors: Sukontasing S,Tanasupawat S,Moonmangmee S,Lee JS,Suzuki KI

    更新日期:2007-09-01 00:00:00

  • Thalassobius abyssi sp. nov., a marine bacterium isolated from cold-seep sediment.

    abstract::A novel marine bacterial strain, designated JAMH 043T, was isolated from cold-seep sediment in Sagami Bay, Japan. Cells were Gram-stain-negative, rod-shaped, non-motile and aerobic chemo-organotrophs. The isolate grew optimally at 25 °C, at pH 7.0-7.5 and with 3 % (w/v) NaCl. The major respiratory quinone was ubiquino...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000758

    authors: Nogi Y,Mori K,Makita H,Hatada Y

    更新日期:2016-02-01 00:00:00

  • Paracoccus tibetensis sp. nov., isolated from Qinghai-Tibet Plateau permafrost.

    abstract::Strain Tibet-S9a3(T) was isolated from Qinghai-Tibet Plateau permafrost, China. The isolate was a Gram-negative, non-motile, non-spore-forming short rod. The 16S rRNA gene sequence indicated that strain Tibet-S9a3(T) was a member of the genus Paracoccus and was closely related to Paracoccus aestuarii B7(T) (98.2 % 16S...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.041905-0

    authors: Zhu S,Zhao Q,Zhang G,Jiang Z,Sheng H,Feng H,An L

    更新日期:2013-05-01 00:00:00

  • Aequorivita viscosa sp. nov., isolated from an intertidal zone, and emended descriptions of Aequorivita antarctica and Aequorivita capsosiphonis.

    abstract::An aerobic, Gram-stain-negative, short rod-shaped, non-motile and non-sporulating bacterium, designed strain 8-1b(T), was isolated from seaweed collected from the intertidal zone of Zhoushan sea area, East China Sea. Strain 8-1b(T) grew at 4-39 °C (optimum, 28-32 °C) and at pH 6.0-9.5 (optimum, 7.0-8.5), and with 0.5-...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.049635-0

    authors: Liu JJ,Zhang XQ,Pan J,Sun C,Zhang Y,Li CQ,Zhu XF,Wu M

    更新日期:2013-09-01 00:00:00

  • Pseudonocardia thailandensis sp. nov., an actinomycete isolated from a subterranean termite nest.

    abstract::A novel Gram-stain-positive bacterium designated CMU-NKS-70T was isolated from a subterranean termite nest and characterized using a polyphasic approach. The strain exhibited branching, pinkish-cream aerial mycelium and cream-brown substrate mycelium, and formed chains of rod-like spores. The 16S rRNA gene sequence an...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002017

    authors: Sujarit K,Sujada N,Kudo T,Ohkuma M,Pathom-Aree W,Lumyong S

    更新日期:2017-08-01 00:00:00

  • Natronoarchaeum rubrum sp. nov., isolated from a marine solar saltern, and emended description of the genus Natronoarchaeum.

    abstract::A halophilic archaeal strain, GX48(T), was isolated from the Gangxi marine solar saltern near Weihai city in Shandong Province, China. Cells of the strain were rod-shaped, stained Gram-negative and formed red-pigmented colonies. Strain GX48(T) was able to grow at 25-50 °C (optimum 37 °C), in the presence of 1.4-4.8 M ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.059071-0

    authors: Qiu XX,Zhao ML,Cui HL

    更新日期:2014-03-01 00:00:00

  • Algoriphagus lutimaris sp. nov., isolated from a tidal flat sediment.

    abstract::A Gram-negative, non-motile, non-spore-forming bacterial strain, S1-3(T), was isolated from a tidal flat sediment on the west coast of Korea and its taxonomic position was investigated. Strain S1-3(T) grew optimally at 30 degrees C and in the presence of 2 % (w/v) NaCl. Strain S1-3(T) contained MK-7 as the predominant...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.012682-0

    authors: Park S,Kang SJ,Oh KH,Oh TK,Yoon JH

    更新日期:2010-01-01 00:00:00

  • Paenalcaligenes hominis gen. nov., sp. nov., a new member of the family Alcaligenaceae.

    abstract::A beige-pigmented bacterium (strain CCUG 53761A(T)) was isolated from human blood from an 85-year-old man in Göteborg, Sweden. Comparative analysis of 16S rRNA gene sequences showed that this bacterium displayed <95 % similarity to all described species of the genera of the family Alcaligenaceae. It grouped within the...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.016576-0

    authors: Kämpfer P,Falsen E,Langer S,Lodders N,Busse HJ

    更新日期:2010-07-01 00:00:00

  • Caldanaerovirga acetigignens gen. nov., sp. nov., an anaerobic xylanolytic, alkalithermophilic bacterium isolated from Trego Hot Spring, Nevada, USA.

    abstract::An anaerobic thermophilic bacterium, designated strain JW/SA-NV4(T), was isolated from a xylan-supplemented enrichment culture from Trego hot spring located within the Black Rock Desert (NV, USA). Cells were generally straight or slightly bent rod-shaped, 0.4-0.8 microm in width and 3-6 microm in length during exponen...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.005207-0

    authors: Wagner ID,Ahmed S,Zhao W,Zhang CL,Romanek CS,Rohde M,Wiegel J

    更新日期:2009-11-01 00:00:00

  • Mariniflexile jejuense sp. nov., isolated from the junction between seawater and a freshwater spring, and emended description of the genus Mariniflexile.

    abstract::A gram-negative, non-spore-forming, non-flagellated, motile-by-gliding rod, designated SSK2-3(T), was isolated from the junction between seawater and a freshwater spring at Jeju island, South Korea. Strain SSK2-3(T) grew optimally at 25-30 °C, at pH 7.0-7.5 and in the presence of 2 % (w/v) NaCl. Phylogenetic analysis ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.042796-0

    authors: Jung YT,Yoon JH

    更新日期:2013-04-01 00:00:00

  • Aneurinibacillus soli sp. nov., isolated from mountain soil.

    abstract::A novel bacterial strain designated CB4(T) was isolated from soil from the Hallasan, Jeju, Korea. Strain CB4(T) was found to be strictly aerobic, Gram-stain-positive, rod-shaped, motile and formed creamy greyish colonies on nutrient agar. The major fatty acids were identified as iso-C(15:0) and iso-C(16:0), and the pr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.066779-0

    authors: Lee KC,Kim KK,Eom MK,Kim JS,Kim DS,Ko SH,Lee JS

    更新日期:2014-11-01 00:00:00

  • Yania halotolerans gen. nov., sp. nov., a novel member of the suborder Micrococcineae from saline soil in China.

    abstract::A novel coccoid, halotolerant actinobacterium, designated strain YIM 70085(T), was isolated from a soil sample that was collected in Xinjiang Province, China, and characterized by using a polyphasic approach. Optimum growth temperature was 28 degrees C and growth occurred optimally in culture media that contained 10 %...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02875-0

    authors: Li WJ,Chen HH,Xu P,Zhang YQ,Schumann P,Tang SK,Xu LH,Jiang CL

    更新日期:2004-03-01 00:00:00

  • Methanosarcina subterranea sp. nov., a methanogenic archaeon isolated from a deep subsurface diatomaceous shale formation.

    abstract::A methanogenic archaeon, strain HC-2(T), was isolated from a deep diatomaceous shale formation. The strain grew on methanol, monomethylamine, dimethylamine, trimethylamine and dimethylsulphide, but not on acetate, H2/CO2, formate, 2-propanol, 2-butanol or cyclopentanol. Cells were Gram-stain-negative, non-motile, and ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000072

    authors: Shimizu S,Ueno A,Naganuma T,Kaneko K

    更新日期:2015-04-01 00:00:00

  • Lactobacillus coleohominis sp. nov., isolated from human sources.

    abstract::Four strains of a hitherto unrecognized gram-positive, catalase-negative, facultatively anaerobic, rod-shaped bacterium isolated from human sources were characterized using phenotypic and molecular taxonomic methods. Comparative 16S rRNA gene sequencing demonstrated that the bacterium represents a new subline within t...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-6-2081

    authors: Nikolaitchouk N,Wacher C,Falsen E,Andersch B,Collins MD,Lawson PA

    更新日期:2001-11-01 00:00:00

  • Sulfurihydrogenibium yellowstonense sp. nov., an extremely thermophilic, facultatively heterotrophic, sulfur-oxidizing bacterium from Yellowstone National Park, and emended descriptions of the genus Sulfurihydrogenibium, Sulfurihydrogenibium subterraneum

    abstract::A novel thermophilic, sulfur-oxidizing Gram-negative bacterium, designated strain SS-5T, was isolated from the Calcite Hot Springs in Yellowstone National Park, USA. The cells were motile rods (1.2-2.8 microm long and 0.6-0.8 microm wide). The new isolate was a facultative heterotroph capable of using elemental sulfur...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63708-0

    authors: Nakagawa S,Shtaih Z,Banta A,Beveridge TJ,Sako Y,Reysenbach AL

    更新日期:2005-11-01 00:00:00

  • Arcticibacter pallidicorallinus sp. nov. isolated from glacier ice.

    abstract::A Gram-stain-negative, rod-shaped bacterium (strain Hh36(T)) was isolated from the No. 1 glacier in Xinjiang, north-west China. Colonies of strain Hh36(T) were pink, convex and round on PYG medium plates. Strain Hh36(T) was able to grow at 4-30 °C and pH 6.0-8.0. Phylogenetic analysis based on 16S rRNA gene sequences ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.061754-0

    authors: Liu Q,Kim SG,Liu HC,Xin YH,Zhou YG

    更新日期:2014-07-01 00:00:00

  • Pseudomonas sabulinigri sp. nov., isolated from black beach sand.

    abstract::A novel Gram-negative, aerobic, motile, short rod-shaped bacterium, designated J64T, was isolated from black sand collected from Soesoggak, Jeju Island, Korea. Cells grew at 4-37 degrees C, at pH 5.5-10.0 and with 0-10 % NaCl. The strain was found to be oxidase- and catalase-positive. Phylogenetic analyses showed that...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65866-0

    authors: Kim KH,Roh SW,Chang HW,Nam YD,Yoon JH,Jeon CO,Oh HM,Bae JW

    更新日期:2009-01-01 00:00:00

  • Taxonomy of haemolytic and/or proteolytic strains of the genus Acinetobacter with the proposal of Acinetobacter courvalinii sp. nov. (genomic species 14 sensu Bouvet & Jeanjean), Acinetobacter dispersus sp. nov. (genomic species 17), Acinetobacter modestu

    abstract::We aimed to define the taxonomic status of 40 haemolytic and/or proteolytic strains of the genus Acinetobacter which were previously classified into five putative species termed as genomic species 14BJ (n=9), genomic species 17 (n=9), taxon 18 (n=7), taxon 19 (n=6) and taxon 20 (n=9). The strains were recovered mostly...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000932

    authors: Nemec A,Radolfova-Krizova L,Maixnerova M,Vrestiakova E,Jezek P,Sedo O

    更新日期:2016-04-01 00:00:00

  • Reclassification of Angiococcus disciformis, Cystobacter minus and Cystobacter violaceus as Archangium disciforme comb. nov., Archangium minus comb. nov. and Archangium violaceum comb. nov., unification of the families Archangiaceae and Cystobacteraceae,

    abstract::The species Archangium gephyra, Angiococcus disciformis, Cystobacter minus and Cystobacter violaceus are currently classified in three different genera of the order Myxococcales. The 16S rRNA gene sequences of the respective type strains show a similarity higher than 98.4 % and form a tight phylogenetic group. A dendr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000533

    authors: Lang E,Schumann P,Tindall BJ,Mohr KI,Spröer C

    更新日期:2015-11-01 00:00:00