Methanosarcina subterranea sp. nov., a methanogenic archaeon isolated from a deep subsurface diatomaceous shale formation.

abstract：:A novel facultatively anaerobic, rod-shaped bacterium, designated LAM1188T, was isolated from the roots of rice (Oryzasativa) in Hubei Province. Cells of LAM1188T were Gram-stain-negative and motile. The temperature and pH ranges for growth were 15-40 °C (optimum: 30 °C) and pH 5-10 (optimum: pH 7), respectively. The ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhou S,Guo X,Wang H,Kong D,Wang Y,Zhu J,Dong W,He M,Hu G,Zhao B,Zhao B,Ruan Z

更新日期：2016-10-01 00:00:00

abstract：:A Gram-positive, motile, moderately halophilic and rod-shaped bacterium, strain AHS-1(T), was isolated from a marine solar saltern in Korea, and its exact taxonomic position was investigated by use of a polyphasic study. Strain AHS-1(T) grew optimally at pH 6.5-7.0 and 37-40 degrees C in the presence of 10-12% (w/v) N...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee SY,Choi WY,Oh TK,Yoon JH

更新日期：2008-01-01 00:00:00

abstract：:A yellow-pigmented bacterial strain, designated RCML-52(T), was isolated from an abandoned gold mine in the desert in Xinjiang, China. Strain RCML-52(T) was Gram-negative, aerobic and non-motile. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain RCML-52(T) was affiliated with the genus Lysobact...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu M,Liu Y,Wang Y,Luo X,Dai J,Fang C

更新日期：2011-02-01 00:00:00

abstract：:A Gram-stain-positive, novel actinobacterium, designated strain JL-6(T), was isolated from the litter of a bamboo (Sasa borealis) forest in Damyang, Korea. Strain JL-6(T) had white-grey, smooth, cylindrical spores that were borne in straight, long spore-chains. The novel strain grew aerobically at 15-28 °C (optimum, 2...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee HJ,Whang KS

更新日期：2014-02-01 00:00:00

abstract：:A Gram-negative ultramicrobacterium (designated strain UMB49(T)) was isolated from a 120,000-year-old, 3,042 m deep Greenland glacier ice core using a 0.2 mum filtration enrichment procedure. Phylogenetic analysis of the 16S rRNA gene sequence indicated that this strain belonged to the genus Herminiimonas of the famil...

journal_title：International journal of systematic and evolutionary microbiology

authors： Loveland-Curtze J,Miteva VI,Brenchley JE

更新日期：2009-06-01 00:00:00

abstract：:The type strain of Nocardia corynebacterioides was the subject of a polyphasic taxonomic study. The 16S rRNA gene sequence was aligned with the sequences of representatives of the genera Corynebacterium, Dietzia, Gordonia, Mycobacterium, Nocardia, Rhodococcus, Skermania, Tsukamurella and Williamsia, and phylogenetic t...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yassin AF,Schaal KP

更新日期：2005-05-01 00:00:00

abstract：:A taxonomic study was conducted on strain EM106(T), isolated from a sediment sample of the East Sea, Republic of Korea. Comparative 16S rRNA gene sequence analyses showed that strain EM106(T) belongs to the family Flavobacteriaceae and is most closely related to Winogradskyella echinorum KMM 6211(T) and Winogradskyell...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim SJ,Choi YR,Park SJ,Kim JG,Shin KS,Roh DH,Rhee SK

更新日期：2013-08-01 00:00:00

abstract：:Two bacterial strains, Fuji 18-1(T) and Fuji 23-1(T), were isolated from the blood of the small Japanese field mouse (Apodemus argenteus) and the large Japanese field mouse (Apodemus speciosus), respectively, specimens of which were captured in the forest of Mount Fuji, Japan. Phenotypic characterization (growth condi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Inoue K,Kabeya H,Shiratori H,Ueda K,Kosoy MY,Chomel BB,Boulouis HJ,Maruyama S

更新日期：2010-04-01 00:00:00

abstract：:Acinetobacter lactucae and Acinetobacter dijkshoorniae were recently described as novel species, and both were reported to be closely related to Acinetobacter pittii. Because they were reviewed and published almost concurrently, their descriptions did not include a specific comparison between these two novel species. ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dunlap CA,Rooney AP

更新日期：2018-01-01 00:00:00

abstract：:A novel actinobacterium, designated strain CFH S0261T, was isolated from a sediment sample of the Yellow River. The taxonomic position of the strain was investigated by using a polyphasic approach. Cells of strain CFH S0261T were Gram-reaction-positive, aerobic, non-motile. Growth occurs at 15-37 °C, pH 6.0-8.0 and wi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Niu MM,Ming H,Cheng LJ,Zhao ZL,Ji WL,Li M,Yi BF,Xia TT,Nie GX

更新日期：2020-05-01 00:00:00

abstract：:A Gram-negative, aerobic, light-orange-coloured, marine bacterium (designated SST-19(T)) was isolated from beach sediment in Jeju, Korea, and its taxonomic position was determined by means of a polyphasic approach. In a neighbour-joining phylogenetic tree based on 16S rRNA gene sequences, strain SST-19(T) was position...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee SD

更新日期：2007-12-01 00:00:00

abstract：:Two Gram-staining-negative, aerobic, rod-shaped bacterial strains, designated Za6a-12(T) and Za6a-17, were isolated from seawater of the East China Sea. Cells of Za6a-12(T) and Za6a-17 were approximately 1.5-2.0 µm×0.5-0.7 µm and motile by a single polar flagellum. Strains grew optimally at pH 7.5-8.0, 28 °C, and in t...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sun C,Huo YY,Liu JJ,Pan J,Qi YZ,Zhang XQ,Zhang Y,Zheng G,Wu M

更新日期：2014-06-01 00:00:00

abstract：:A Gram-staining-positive, moderately halophilic bacterium, designated strain NGS-2T, was isolated from sediment of a solar saltern pond located in Shinan, Korea. Strain NGS-2T was a strictly aerobic, non-motile rod that grew at pH 5.0-10.0 (optimum, pH 8.0), at 10-30 °C (optimum, 28 °C) and in the presence of 1-20 % (...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim SJ,Lee JC,Han SI,Whang KS

更新日期：2015-12-01 00:00:00

abstract：:We analysed the taxonomic position of the genus Listonella based on phylogenetic, genomic and phenotypic data. The species of the genus Listonella were nested within the genus Vibrio according to the 16S rRNA gene sequence-based phylogenetic tree. The closest neighbour of Vibrio (Listonella) anguillarum strains LMG 44...

journal_title：International journal of systematic and evolutionary microbiology

authors： Thompson FL,Thompson CC,Dias GM,Naka H,Dubay C,Crosa JH

更新日期：2011-12-01 00:00:00

abstract：:A polyphasic taxonomic approach was used to characterize a Gram-stain-positive bacterium, designated strain CC-CFT486T, isolated from soil sampled in a maize field in Taiwan. Cells of strain CC-CFT486T were short rods, motile with polar flagella, catalase-positive and oxidase-positive. Optimal growth occurred at 30 °С...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lin SY,Tsai CF,Hameed A,Young CC

更新日期：2021-01-05 00:00:00

abstract：:A polyphasic taxonomic study (employing whole-cell protein and fatty acid analyses, 16S rDNA sequencing, DNA-DNA hybridization, determination of DNA G+C content, antibiotic susceptibility testing and extensive phenotypic characterization) was performed on 10 isolates that appeared to be related to Alcaligenes faecalis...

journal_title：International journal of systematic and evolutionary microbiology

authors： Coenye T,Vancanneyt M,Falsen E,Swings J,Vandamme P

更新日期：2003-11-01 00:00:00

abstract：:The taxonomic position of an actinomycete, strain IMMIB L-889(T), isolated from the sputum of a 64-year-old man, was determined using a polyphasic taxonomic approach. The strain had chemical and morphological properties that were consistent with its classification in the genus Actinomadura. It formed a distinct phylet...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yassin AF,Spröer C,Siering C,Klenk HP

更新日期：2010-01-01 00:00:00

abstract：:Strain CBA3207T, a novel Gram-stain-negative, aerobic and rod-shaped bacterium, was isolated from the seashore sand of Jeju island in South Korea. Strain CBA3207T grew optimally at 25-30 °C and pH 7.0-7.5 with 3.0-4.0 % (w/v) NaCl. It was catalase-positive, oxidase-negative, and hydrolysed starch, gelatin, and Tweens ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee JK,Cha IT,Kim M,Choi BG,Song HS,Kim JY,Roh SW,Lee SJ

更新日期：2017-02-01 00:00:00

abstract：:Two halophilic archaea, strains EN-2(T) and SH-4, were isolated from the saline lakes Erliannor and Shangmatala, respectively, in Inner Mongolia, China. Cells were strictly aerobic, motile rods. Colonies were red. Strains EN-2(T) and SH-4 were able to grow at 25-50 °C (optimum 35-40 °C), with 2.5-5.0 M NaCl (optimum 3...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gutiérrez MC,Castillo AM,Corral P,Kamekura M,Ventosa A

更新日期：2011-05-01 00:00:00

abstract：:Bacterial strain CP183-8(T) was isolated from biological soil crusts collected in the Colorado Plateau, USA. Cells of this strain were aerobic, non-motile, Gram-negative, psychrotolerant and formed beaded chains in the stationary growth phase. They contained C(16 : 1)omega5c and C(16 : 1)omega7c as major fatty acids. ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Reddy GSN,Garcia-Pichel F

更新日期：2005-05-01 00:00:00

abstract：:A mesophilic anaerobic bacterium, designated KHALHBd91T was isolated from the moderately hot spring of Hammam Biadha, Tunisia. The strain was Gram-staining-negative, non-sporulating, non-motile and rod-shaped, appearing singly (0.5-2.0×0.5-1 µm). It grew anaerobically at temperatures between 20 and 50 °C (optimum 37 °...

journal_title：International journal of systematic and evolutionary microbiology

authors： Fadhlaoui K,Ben Hania W,Postec A,Hamdi M,Ollivier B,Fardeau ML

更新日期：2016-11-01 00:00:00

abstract：:A Gram-stain-negative, strictly aerobic, non-motile, rod-shaped bacterial strain, THG-A18(T), was isolated from soil of Gwangju province in South Korea. Strain THG-A18(T) grew optimally at 25-30 °C, at pH 7.0-8.0 and in the absence of NaCl. Strain THG-A18(T) displayed β-glucosidase activity, which enabled it to conver...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park YJ,Son HM,Lee EH,Kim JH,Mavlonov GT,Choi KJ,Shin HS,Kook M,Yi TH

更新日期：2013-12-01 00:00:00

abstract：:Analysis of 16S rRNA gene sequences has been the method generally used to study the evolution and phylogeny of bacteria. Phylogenetic analysis of the 16S rRNA gene has shown the position of the genus Helicobacter in the epsilon-subclass of the Proteobacteria. Because 16S rRNA-based phylogeny does not always correspond...

journal_title：International journal of systematic and evolutionary microbiology

authors： Mikkonen TP,Kärenlampi RI,Hänninen ML

更新日期：2004-05-01 00:00:00

abstract：:To obtain amino acid-utilizing sulfate reducers, enrichment culture was carried out with a medium containing Casamino acids and sulfate and inoculated with coastal marine sediment from the eutrophic Tokyo Bay, Japan. A sulfate reducer, designated strain C/L2(T), was isolated from the sulfide-producing enrichment cultu...

journal_title：International journal of systematic and evolutionary microbiology

authors： Takii S,Hanada S,Hase Y,Tamaki H,Uyeno Y,Sekiguchi Y,Matsuura K

更新日期：2008-10-01 00:00:00

abstract：:A Gram-positive, moderately halophilic and endospore-forming bacterium, designated strain 18OM(T), was isolated from salted animal hides. The cells were rods and produced ellipsoidal endospores at a terminal position. Strain 18OM(T) was motile, strictly aerobic and grew at 0.5-25 % (w/v) NaCl [optimal growth at 10 % (...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sánchez-Porro C,Yilmaz P,de la Haba RR,Birbir M,Ventosa A

更新日期：2011-05-01 00:00:00

abstract：:A Gram-positive-staining, filamentous bacterial strain that developed cylindrical sporangia containing four oval- to rod-shaped spores at the ends of short sporangiophores on branched aerial mycelium was isolated from tropical rainforest soil near a hot spring. The cell-wall peptidoglycan contained meso-diaminopimelic...

journal_title：International journal of systematic and evolutionary microbiology

authors： Suriyachadkun C,Chunhametha S,Thawai C,Tamura T,Potacharoen W,Kirtikara K,Sanglier JJ

更新日期：2009-05-01 00:00:00

abstract：:A novel bacterial strain designated B3A(T), isolated from shrimp paste, was investigated by a polyphasic taxonomic approach. Cells stained Gram-positive and were aerobic, non-pigmented, sporulating and rod-shaped with a polar flagellum. 16S rRNA gene sequence analysis indicated that strain B3A(T) belonged to the class...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sheu SY,Arun AB,Jiang SR,Young CC,Chen WM

更新日期：2011-05-01 00:00:00

abstract：:A polyphasic taxonomic study was performed on an unidentified Arcanobacterium-like Gram-stain-positive bacterium designated strain C605018/01/1T isolated from a milk sample collected from the udder of a cow at post mortem. Comparative 16S rRNA gene sequencing showed that the bacterium belonged to the genus Arcanobacte...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sammra O,Foster G,Hassan AA,Alssahen M,Lämmler C,Glaeser SP,Kämpfer P,Busse HJ,Borowiak M,Malorny B,Ritchie CM,Prenger-Berninghoff E,Abdulmawjood A

更新日期：2020-07-01 00:00:00

abstract：:Modern bacterial taxonomy is based on a polyphasic approach that combines phenotypic and genotypic characteristics, including 16S rRNA sequence similarity. However, the 95 % (for genus) and 98.7 % (for species) sequence similarity thresholds that are currently recommended to classify bacterial isolates were defined by...

journal_title：International journal of systematic and evolutionary microbiology

authors： Rossi-Tamisier M,Benamar S,Raoult D,Fournier PE

更新日期：2015-06-01 00:00:00

abstract：:A previously undescribed, slowly growing, scotochromogenic mycobacterial strain (49061(T)) was isolated from a patient with pulmonary infections during the hsp65-sequence-based identification of Korean clinical isolates. Its 16S rRNA gene sequence was unique and the phylogenetic analysis based on 16S rRNA gene sequenc...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim BJ,Hong SH,Kook YH,Kim BJ

更新日期：2014-01-01 00:00:00