Allobacillus halotolerans gen. nov., sp. nov. isolated from shrimp paste.

Abstract:

:A novel bacterial strain designated B3A(T), isolated from shrimp paste, was investigated by a polyphasic taxonomic approach. Cells stained Gram-positive and were aerobic, non-pigmented, sporulating and rod-shaped with a polar flagellum. 16S rRNA gene sequence analysis indicated that strain B3A(T) belonged to the class Bacilli and was a member of the family Bacillaceae. Strain B3A(T) shared low levels of 16S rRNA gene sequence similarity (<94.0 %) with members of other genera in the family Bacillaceae and was most closely related to Halalkalibacillus halophilus BH2(T) (93.8 % sequence similarity). The isolate was able to grow at 20-45 °C, with 0.5-15 % NaCl and at pH 6-9. Menaquinone with seven isoprene units (MK-7) was the major respiratory quinone and 16 : 0 iso, 15 : 0 anteiso and 14 : 0 iso were the major fatty acids. The major polar lipids were diphosphatidylglycerol and phosphatidylglycerol. The characteristic diamino acid of the peptidoglycan was meso-diaminopimelic acid. The DNA G+C content was 45.3 mol%. On the basis of 16S rRNA gene sequence analysis in combination with chemotaxonomic and physiological data, strain B3A(T) represents a novel genus and species in the family Bacillaceae for which the name Allobacillus halotolerans gen. nov., sp. nov. is proposed. The type strain of Allobacillus halotolerans is B3A(T) ( = BCRC 17939(T)  = LMG 24826(T)).

authors

Sheu SY,Arun AB,Jiang SR,Young CC,Chen WM

doi

10.1099/ijs.0.023341-0

subject

Has Abstract

pub_date

2011-05-01 00:00:00

pages

1023-1027

issue

Pt 5

eissn

1466-5026

issn

1466-5034

journal_volume

61

pub_type

杂志文章
  • Pleomorphochaeta naphthae sp. nov., a new anaerobic fermentative bacterium isolated from an oil field.

    abstract::A novel anaerobic fermentative bacterium, strain SEBR 4209T, was isolated from a water sample of a Congolese oil field. Strain SEBR 4209T is phylogenetically related to the genus Pleomorphochaeta, in the family Spirochaetaceae. Its closest relatives are Pleomorphochaeta caudata SEBR 4223T (94.5 % 16S rRNA gene sequenc...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003048

    authors: Arroua B,Grimaud R,Hirschler-Réa A,Bouriat P,Magot M,Urios L,Ranchou-Peyruse A

    更新日期:2018-12-01 00:00:00

  • Rhodoligotrophos appendicifer gen. nov., sp. nov., an appendaged bacterium isolated from a freshwater Antarctic lake.

    abstract::A Gram-stain-negative, non-spore-forming, non-motile, irregularly circular, aerobic/microaerobic appendaged bacterium (strain 120-1(T)) was isolated from Naga-ike, one of the freshwater lakes in the Skarvsnes ice-free area of Antarctica. Strain 120-1(T) grew between 5 and 35 °C, with optimum growth at 30 °C. The pH ra...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.032953-0

    authors: Fukuda W,Yamada K,Miyoshi Y,Okuno H,Atomi H,Imanaka T

    更新日期:2012-08-01 00:00:00

  • Elstera litoralis gen. nov., sp. nov., isolated from stone biofilms of Lake Constance, Germany.

    abstract::An alphaproteobacterium, strain Dia-1(T), was isolated from algae-dominated biofilms on stones from the littoral zone of Lake Constance, Germany. This bacterium was isolated after initial enrichment in spent medium obtained after growth of a diatom culture. Numerous sugars and some organic acids and alcohols served as...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.026609-0

    authors: Rahalkar M,Bahulikar RA,Deutzmann JS,Kroth PG,Schink B

    更新日期:2012-08-01 00:00:00

  • Flexivirga caeni sp. nov., isolated from activated sludge.

    abstract::A Gram-stain-positive, strictly aerobic, non-motile, non-spore-forming and oval-shaped bacterium, designated strain BO-16T was isolated from activated sludge. In this study, we describe the taxonomic characterization and classification of this bacterium by using the polyphasic approach. Growth of BO-16T was observed a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003910

    authors: Keum DH,Lee YJ,Lee SY,Im WT

    更新日期:2020-02-01 00:00:00

  • Highly organized structure in the non-coding region of the psbA minicircle from clade C Symbiodinium.

    abstract::The chloroplast genes of dinoflagellates are distributed among small, circular dsDNA molecules termed minicircles. In this paper, we describe the structure of the non-coding region of the psbA minicircle from Symbiodinium: DNA sequence was obtained from five Symbiodinium strains obtained from four different coral host...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02594-0

    authors: Moore RB,Ferguson KM,Loh WK,Hoegh-Guldberg O,Carter DA

    更新日期:2003-11-01 00:00:00

  • Flavisolibacter ginsenosidimutans sp. nov., with ginsenoside-converting activity isolated from soil used for cultivating ginseng.

    abstract::A Gram-reaction-negative, aerobic, non-motile and rod-shaped bacterial strain designated Gsoil 636T was isolated from soil of a ginseng cultivation field in Pocheon Province, South Korea and its taxonomic position was investigated using a polyphasic approach. Gsoil 636T grew at 18-30 °C and at pH 6.0-8.0 on R2A medium...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000660

    authors: Zhao Y,Liu Q,Kang MS,Jin F,Yu H,Im WT

    更新日期:2015-12-01 00:00:00

  • Algibacter lectus gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from green algae.

    abstract::Three strains of the marine, gliding, pigmented, facultatively anaerobic, heterotrophic, Gram-negative bacteria were isolated from the green algae Acrosiphonia sonderi (Kütz) Kornm and Ulva fenestrata Ruprecht inhabiting the Sea of Japan. 16S rDNA sequence analysis indicated that the strains were members of the family...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02949-0

    authors: Nedashkovskaya OI,Kim SB,Han SK,Rhee MS,Lysenko AM,Rohde M,Zhukova NV,Frolova GM,Mikhailov VV,Bae KS

    更新日期:2004-07-01 00:00:00

  • Pseudozyma hubeiensis sp. nov. and Pseudozyma shanxiensis sp. nov., novel ustilaginomycetous anamorphic yeast species from plant leaves.

    abstract::Among basidiomycetous yeast strains isolated from wilting leaves of various plants in China, two groups of Pseudozyma strains were distinguished from the others by morphological and physiological characterization. Molecular taxonomic analysis based on sequencing of the large subunit (26S) rRNA gene D1/D2 domain and in...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63827-0

    authors: Wang QM,Jia JH,Bai FY

    更新日期:2006-01-01 00:00:00

  • Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest.

    abstract::Four isolates (FSL S4-120(T), FSL S4-696, FSL S4-710, and FSL S4-965) of Gram-positive, motile, facultatively anaerobic, non-spore-forming bacilli that were phenotypically similar to species of the genus Listeria were isolated from soil, standing water and flowing water samples obtained from the natural environment in...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.014118-0

    authors: Graves LM,Helsel LO,Steigerwalt AG,Morey RE,Daneshvar MI,Roof SE,Orsi RH,Fortes ED,Milillo SR,den Bakker HC,Wiedmann M,Swaminathan B,Sauders BD

    更新日期:2010-06-01 00:00:00

  • Compostimonas suwonensis gen. nov., sp. nov., isolated from spent mushroom compost.

    abstract::A Gram-positive, aerobic, non-motile, short rod, designated SMC46(T), was isolated from a spent mushroom compost sample collected in the Suwon region, South Korea. 16S rRNA gene sequence analysis revealed that strain SMC46(T) was a member of the family Microbacteriaceae; however, the isolate formed a branch separate f...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.036343-0

    authors: Kim SJ,Tamura T,Hamada M,Ahn JH,Weon HY,Park IC,Suzuki KI,Kwon SW

    更新日期:2012-10-01 00:00:00

  • Agarivorans albus gen. nov., sp. nov., a gamma-proteobacterium isolated from marine animals.

    abstract::Six bacterial strains were isolated from healthy marine organisms that were collected from the coast of the Kanto area in Japan. Phylogenetic analysis based on 16S rDNA sequence similarity showed that the six isolates formed a separate cluster in the gamma-Proteobacteria and were related to the genera Alteromonas and ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02778-0

    authors: Kurahashi M,Yokota A

    更新日期:2004-05-01 00:00:00

  • Pseudonocardia dioxanivorans sp. nov., a novel actinomycete that grows on 1,4-dioxane.

    abstract::An actinomycete strain (CB1190(T)) was previously isolated from industrial sludge contaminated with 1,4-dioxane. The cells of this culture are Gram-positive and exhibit branching aerial and vegetative mycelium. Analysis of the 16S rRNA gene sequence indicates that the strain belongs to the genus Pseudonocardia, closel...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63085-0

    authors: Mahendra S,Alvarez-Cohen L

    更新日期:2005-03-01 00:00:00

  • Lysobacter olei sp. nov., isolated from oil-contaminated soil.

    abstract::Strain D-14T, a brown-coloured, Gram-stain-negative, non-motile and rod-shaped bacterium, was isolated from oil-contaminated soil. It was able to grow at 20-40 °C, at pH 6.0-10.0 and at 0-1 % (w/v) NaCl concentration. Based on the 16S rRNA gene sequence analysis, strain D-14T belonged to the genus Lysobacter and was c...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002348

    authors: Chaudhary DK,Lee SD,Kim J

    更新日期:2017-11-01 00:00:00

  • Paenibacillus assamensis sp. nov., a novel bacterium isolated from a warm spring in Assam, India.

    abstract::A polyphasic approach was used to characterize a bacterium, GPTSA 11(T), isolated from a warm spring located in a reserve forest in Assam, India. The cells are Gram-variable, strictly aerobic, sporulating motile rods. The major fatty acids of the strain are C(15 : 0) anteiso (48.42 %), C(16 : 0) iso (11.59 %), C(16 : ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63846-0

    authors: Saha P,Mondal AK,Mayilraj S,Krishnamurthi S,Bhattacharya A,Chakrabarti T

    更新日期:2005-11-01 00:00:00

  • Classification of three corynebacterial strains isolated from the Northern Bald Ibis (Geronticus eremita): proposal of Corynebacterium choanae sp. nov., Corynebacterium pseudopelargi sp. nov., and Corynebacterium gerontici sp. nov.

    abstract::Three Gram-stain-positive, rod-to-coccoid-shaped, catalase-positive and non-motile bacterial strains isolated from the choanae of a Northern bald ibis, designated strains 200CHT, W8T and 812CHT, respectively, were subjected to comprehensive taxonomic characterization. The three strains were oxidase-negative. The 16S r...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003580

    authors: Busse HJ,Kleinhagauer T,Glaeser SP,Spergser J,Kämpfer P,Rückert C

    更新日期:2019-09-01 00:00:00

  • Sharpea azabuensis gen. nov., sp. nov., a Gram-positive, strictly anaerobic bacterium isolated from the faeces of thoroughbred horses.

    abstract::Four bacterial strains, designated ST18(T), HM244, HM250 and DI49, were isolated from the fresh faeces of four thoroughbred horses in Japan. Cells were Gram-positive, strictly anaerobic, catalase-negative, non-spore-forming, non-motile rods that occurred in chains. They were placed in the same subcluster based on 16S ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65543-0

    authors: Morita H,Shiratori C,Murakami M,Takami H,Toh H,Kato Y,Nakajima F,Takagi M,Akita H,Masaoka T,Hattori M

    更新日期:2008-12-01 00:00:00

  • Halorubrum lipolyticum sp. nov. and Halorubrum aidingense sp. nov., isolated from two salt lakes in Xin-Jiang, China.

    abstract::Two extremely halophilic archaea, strains 9-3(T) and 31-hong(T), were isolated from Aibi salt lake and Aiding salt lake in Xin-Jiang, China. Their morphology, physiology, biochemical features, polar lipid compositions and 16S rRNA gene sequences were characterized in order to elucidate their taxonomic status. The resu...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64305-0

    authors: Cui HL,Tohty D,Zhou PJ,Liu SJ

    更新日期:2006-07-01 00:00:00

  • Ochrobactrum rhizosphaerae sp. nov. and Ochrobactrum thiophenivorans sp. nov., isolated from the environment.

    abstract::Two Gram-negative, rod-shaped, non-spore-forming bacteria, PR17(T) and DSM 7216(T), isolated from the potato rhizosphere and an industrial environment, respectively, were studied for their taxonomic allocation. By rrs (16S rRNA) gene sequencing, these strains were shown to belong to the Alphaproteobacteria, most close...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65407-0

    authors: Kämpfer P,Sessitsch A,Schloter M,Huber B,Busse HJ,Scholz HC

    更新日期:2008-06-01 00:00:00

  • Classification of 'Sarraceniospora aurea' Furihata et al. 1989 as Actinocorallia aurea sp. nov.

    abstract::Phylogenetic analysis of 'Sarraceniospora aurea' NBRC 14752 and strain NBRC 15120, based on 16S rRNA gene sequences, revealed that these organisms are related to members of the genus Actinocorallia. These organisms contained glutamic acid, alanine and meso-diaminopimelic acid as cell-wall amino acids and the menaquino...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64008-0

    authors: Tamura T,Hatano K,Suzuki KI

    更新日期:2007-09-01 00:00:00

  • Five novel species of the genus Nocardiopsis isolated from hypersaline soils and emended description of Nocardiopsis salina Li et al. 2004.

    abstract::Five novel Nocardiopsis strains isolated from hypersaline soils in China were subjected to a polyphasic analysis to determine their taxonomic position. All of the novel isolates could grow on agar plates at NaCl concentrations of up to 18 % (w/v), with optimum growth at 5-8 %. The DNA G+C contents of the novel strains...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64033-0

    authors: Li WJ,Kroppenstedt RM,Wang D,Tang SK,Lee JC,Park DJ,Kim CJ,Xu LH,Jiang CL

    更新日期:2006-05-01 00:00:00

  • Aquiflexum aquatile sp. nov., isolated from lake water.

    abstract::A Gram-stain-negative, facultative anaerobic, red-coloured, rod-shaped, non-flagellated, non-motile and non-gliding bacterium, designated strain Z0201T, was isolated from lake water in Yunnan, China (26° 16' N, 99° 94' E). Cells of strain Z0201T were 0.2-0.4 µm wide and 1.4-2.5 µm long, catalase-positive and oxidase-n...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003405

    authors: Wang XT,Wang XM,Zheng WS,Zhang XK,Du ZJ

    更新日期:2019-07-01 00:00:00

  • Candida cellulosicola sp. nov., a xylose-utilizing anamorphic yeast from rotten wood.

    abstract::Two xylose-utilizing yeast strains isolated from rotten wood collected in the rainforest in different mountains of Hainan province, southern China, were studied. Sequence analysis of the large subunit rDNA D1/D2 domain and internal transcribed spacer region revealed that the strains represent a novel anamorphic yeast ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.031351-0

    authors: Guo X,Zhu H,Bai FY

    更新日期:2012-01-01 00:00:00

  • Fulvivirga lutimaris sp. nov., isolated from a tidal flat sediment.

    abstract::A Gram-stain-negative, non-flagellated, non-gliding and rod-shaped bacterial strain, designated TM-6T, was isolated from a tidal flat sediment in the Korean peninsula. Strain TM-6T was found to grow optimally at pH 7.0-8.0, at 30 °C and in the presence of 2-3% (w/v) NaCl. A neighbour-joining phylogenetic tree based on...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001085

    authors: Jung YT,Ha MJ,Park S,Lee JS,Yoon JH

    更新日期:2016-07-01 00:00:00

  • Sulfurihydrogenibium yellowstonense sp. nov., an extremely thermophilic, facultatively heterotrophic, sulfur-oxidizing bacterium from Yellowstone National Park, and emended descriptions of the genus Sulfurihydrogenibium, Sulfurihydrogenibium subterraneum

    abstract::A novel thermophilic, sulfur-oxidizing Gram-negative bacterium, designated strain SS-5T, was isolated from the Calcite Hot Springs in Yellowstone National Park, USA. The cells were motile rods (1.2-2.8 microm long and 0.6-0.8 microm wide). The new isolate was a facultative heterotroph capable of using elemental sulfur...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63708-0

    authors: Nakagawa S,Shtaih Z,Banta A,Beveridge TJ,Sako Y,Reysenbach AL

    更新日期:2005-11-01 00:00:00

  • Marortus luteolus gen. nov., sp. nov., isolated from surface seawater of the East Sea in China.

    abstract::A Gram-stain-negative, motile, aerobic, rod-shaped bacterium with flagella, designated ZX-21T, was isolated from surface seawater of the East Sea in Zhoushan, China. Growth of strain ZX-21T was observed at 10--35  o°C (optimum, 30 °C), at pH 6.0-8.5 (pHoptimum 6.5-7.0) and in the presence of 0.5-8 % (w/v) NaCl (optimu...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003348

    authors: Yu XD,Yu XY,Fu GY,Zhao Z,Shen X,Sun C,Wu M

    更新日期:2019-05-01 00:00:00

  • Oceanibium sediminis gen. nov., sp. nov., isolated from marine sediment.

    abstract::A novel Gram-stain-negative, rod-shaped marine bacterium, designated as strain O448T, was isolated from the coastal area of Weihai, China (122° 14' E, 36° 54' N). Cells of strain O448T were non-motile, aerobic, approximately 0.4-0.6 µm wide and 1.5-2.0 µm long. Growth occurred at 20-40 °C (optimally between 33-37 °C),...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003139

    authors: Chang YQ,Meng X,Du ZZ,Du ZJ

    更新日期:2019-01-01 00:00:00

  • Reclassification of the Clostridium clostridioforme and Clostridium sphenoides clades as Enterocloster gen. nov. and Lacrimispora gen. nov., including reclassification of 15 taxa.

    abstract::The genus Clostridium belongs to the family Clostridiaceae. However, many species with the genus name Clostridium are found in different families and even crossing into a different phylum. Motivated by recently completed genome sequences, we propose the reclassification of two separate clades that include misclassifie...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003698

    authors: Haas KN,Blanchard JL

    更新日期:2020-01-01 00:00:00

  • Acinetobacter dijkshoorniae is a later heterotypic synonym of Acinetobacter lactucae.

    abstract::Acinetobacter lactucae and Acinetobacter dijkshoorniae were recently described as novel species, and both were reported to be closely related to Acinetobacter pittii. Because they were reviewed and published almost concurrently, their descriptions did not include a specific comparison between these two novel species. ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002470

    authors: Dunlap CA,Rooney AP

    更新日期:2018-01-01 00:00:00

  • Reclassification of Thermoterrabacterium ferrireducens as Carboxydothermus ferrireducens comb. nov., and emended description of the genus Carboxydothermus.

    abstract::Similarities in phylogeny and metabolic properties between the type species of two monospecific genera of thermophilic anaerobic bacteria, Carboxydothermus hydrogenoformans and Thermoterrabacterium ferrireducens, and analysis of their recently available 16S rRNA gene sequences warranted clarification of their taxonomi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64503-0

    authors: Slobodkin AI,Sokolova TG,Lysenko AM,Wiegel J

    更新日期:2006-10-01 00:00:00

  • Bacillus acidicola sp. nov., a novel mesophilic, acidophilic species isolated from acidic Sphagnum peat bogs in Wisconsin.

    abstract::A mesophilic, acidophilic, spore-forming bacterium, strain 105-2(T), was isolated from an acidic Sphagnum peat bog in Wisconsin, USA. Strain 105-2(T) has 16S rRNA gene sequence similarity to Bacillus sporothermodurans DSM 10599(T) and Bacillus oleronius DSM 9356(T) of 97.4 and 97.8%, respectively. The primary lipoquin...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02337-0

    authors: Albert RA,Archambault J,Rosselló-Mora R,Tindall BJ,Matheny M

    更新日期:2005-09-01 00:00:00