Erythrobacter lutimaris sp. nov., isolated from a tidal flat sediment.

abstract：:Two gram-negative, aerobic, non-pigmented, non-motile, rod-shaped bacteria, strains KMM 9015 and KMM 9018(T), were isolated from a sample of shallow sediment collected from the Sea of Japan. An analysis of the nearly complete 16S rRNA gene sequences showed that the isolates were very close to each other phylogenetical...

journal_title：International journal of systematic and evolutionary microbiology

authors： Romanenko LA,Tanaka N,Svetashev VI,Mikhailov VV

更新日期：2011-07-01 00:00:00

abstract：:A Gram-staining-negative, aerobic, non-motile, rod-shaped bacterium, designated as P308H10T, was isolated from surface sediment of the Southern Indian Ocean. Growth occurred at 4-36 °C (optimum 20-25 °C), pH 6.0-8.5 (optimum 7.5-8.0) and in the presence of 1-8 % (w/v) NaCl (optimum 2-3 %). Phylogenetic analysis based ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li AZ,Lin LZ,Zhang MX,Lv Y,Zhu HH

更新日期：2018-03-01 00:00:00

abstract：:A halophilic actinomycete strain, designated YIM 91168T, was isolated from a salt lake in Xinjiang province, north-west China. The isolate grew at 20-40 degrees C, pH 5-8 and 6-22% (w/v) NaCl; there was no growth in the absence of NaCl. The whole-cell hydrolysate contained meso-diaminopimelic acid, galactose and arabi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tang SK,Wang Y,Wu JY,Cao LL,Lou K,Xu LH,Jiang CL,Li WJ

更新日期：2009-09-01 00:00:00

abstract：:Three short spore chain-forming actinomycete strains were isolated from soil samples collected from subtropical islands in Japan. The cell-wall peptidoglycan of these strains contained meso-diaminopimelic acid (meso-A(2)pm), glutamic acid and alanine. The major isoprenoid quinone was MK-9(H(4)), iso-C(16 : 0) and 2-OH...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tamura T,Ishida Y,Otoguro M,Suzuki KI

更新日期：2010-11-01 00:00:00

abstract：:Two strains (S-34T and S-35) of a novel ascomycetous yeast species belonging to the genus Kazachstania were isolated from soil from a mixed deciduous forest in Amphoe Wang Nam Khiao, Nakhon Ratchasima Province, Thailand. The D1/D2 domains of the large-subunit rDNA sequences of the two strains were identical and also i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Limtong S,Yongmanitchai W,Tun MM,Kawasaki H,Seki T

更新日期：2007-02-01 00:00:00

abstract：:Nine Burkholderia cepacia complex (Bcc) bacteria were isolated during environmental surveys for the ecological niche of Burkholderia pseudomallei, the aetiological agent of melioidosis, in the Northern Territory of Australia. They represented two multi-locus sequence analysis-based clusters, referred to as Bcc B and B...

journal_title：International journal of systematic and evolutionary microbiology

authors： De Smet B,Mayo M,Peeters C,Zlosnik JEA,Spilker T,Hird TJ,LiPuma JJ,Kidd TJ,Kaestli M,Ginther JL,Wagner DM,Keim P,Bell SC,Jacobs JA,Currie BJ,Vandamme P

更新日期：2015-07-01 00:00:00

abstract：:A yeast, strain NCYC 2938T, was isolated from contaminated industrial material. This material was involved in a cascade continuous process for oxidizing sorbitol (D-glucitol) to L-sorbose. The isolate is similar, although not identical, to Candida geochares and Candida magnoliae in its physiological characteristics. S...

journal_title：International journal of systematic and evolutionary microbiology

authors： James SA,Bond CJ,Roberts IN

更新日期：2001-05-01 00:00:00

abstract：:A novel Gram-stain-positive bacterium designated CMU-NKS-70T was isolated from a subterranean termite nest and characterized using a polyphasic approach. The strain exhibited branching, pinkish-cream aerial mycelium and cream-brown substrate mycelium, and formed chains of rod-like spores. The 16S rRNA gene sequence an...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sujarit K,Sujada N,Kudo T,Ohkuma M,Pathom-Aree W,Lumyong S

更新日期：2017-08-01 00:00:00

abstract：:There is a need for easy, practical, reliable and robust techniques for the identification and classification of bacterial isolates to the species level as alternatives to 16S rRNA gene sequence analysis and DNA-DNA hybridization. Here, we demonstrate that multilocus sequence analysis (MLSA) of housekeeping genes is a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Martens M,Dawyndt P,Coopman R,Gillis M,De Vos P,Willems A

更新日期：2008-01-01 00:00:00

abstract：:A mesophilic, chemolithoautotrophic, neutrophilic and aerobic ammonia-oxidizing archaeon, designated strain MY1T, was isolated from agricultural soil. Microscopic observation revealed short, rod-shaped cells with a diameter of 0.3-0.5 µm and length of 0.6-1.0 µm. The isolate had no flagella and pili, and possessed no ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jung MY,Islam MA,Gwak JH,Kim JG,Rhee SK

更新日期：2018-10-01 00:00:00

abstract：:Two Gram-stain-negative and facultative anaerobic bacteria, designated strains SYSU G00088T and YIM 73032, were isolated from sediment samples collected from hot springs in Tibet, China. Based on the analyses of the 16S rRNA gene sequences, the two isolates were observed to be a member of the family Comamonadaceae, sh...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ding YP,Khan IU,Li MM,Xian WD,Liu L,Zhou EM,Salam N,Li WJ

更新日期：2019-02-01 00:00:00

abstract：:In the course of isolating bacteria from infective juveniles of the entomopathogenic nematode Steinernema thermophilum Ganguly & Singh, 2000, three isolates were obtained (OP1T, OP29 and VS3). On the basis of 16S rRNA gene sequence analysis and riboprint patterns, these three strains were identical to each other but d...

journal_title：International journal of systematic and evolutionary microbiology

authors： Somvanshi VS,Lang E,Sträubler B,Spröer C,Schumann P,Ganguly S,Saxena AK,Stackebrandt E

更新日期：2006-03-01 00:00:00

abstract：:A Gram-stain negative, pink-pigmented, strictly aerobic, non-motile and coccoid-shaped bacterial strain, designated TG-679T, was isolated from a deep-sea water sample collected from the South China Sea. Cells of strain TG-679T were catalase- and oxidase-positive, lacked bacteriochlorophyll a and carotenoid. Strain TG-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ren Y,Chen C,Ye Y,Wang R,Han S,Zhao Z,Zhang R,Zhang G,Wu M,Xu J

更新日期：2019-02-01 00:00:00

abstract：:Two methanotrophic bacteria, strains R-45377(T) and R-45370, were respectively isolated from a slurry pit of a cow stable and from a denitrification tank of a wastewater treatment plant in Belgium. The strains showed 99.9 % 16S rRNA gene sequence similarity. Cells were Gram-negative, motile rods containing type I meth...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hoefman S,Heylen K,De Vos P

更新日期：2014-04-01 00:00:00

abstract：:A novel mesophilic, hydrogenotrophic methanogen, designated strain TNR(T), was isolated from an anaerobic, propionate-degradation enrichment culture that was originally established from a rice field soil sample from Taiwan. Cells were non-motile rods, 2.0-6.5 µm long by 0.3 µm wide. Filamentous (up to about 100 µm) an...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sakai S,Ehara M,Tseng IC,Yamaguchi T,Bräuer SL,Cadillo-Quiroz H,Zinder SH,Imachi H

更新日期：2012-06-01 00:00:00

abstract：:The taxonomic position of an endophytic actinomycete, strain GKU 157T, isolated from the roots of a jambolan plum tree (Syzygium cumini L. Skeels) collected at Khao Khitchakut National Park, Chantaburi province, Thailand, was determined using a polyphasic taxonomic approach. 16S rRNA gene sequence analysis revealed th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Rachniyom H,Matsumoto A,Indananda C,Duangmal K,Takahashi Y,Thamchaipenet A

更新日期：2015-06-01 00:00:00

abstract：:Strains of Gram-negative, rod-shaped, non-spore-forming bacteria were isolated from nitrogen-fixing nodules of the native legumes Listia angolensis (from Zambia) and Lupinus texensis (from Texas, USA). Phylogenetic analysis of the 16S rRNA gene showed that the novel strains belong to the genus Microvirga, with ≥ 96.1%...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ardley JK,Parker MA,De Meyer SE,Trengove RD,O'Hara GW,Reeve WG,Yates RJ,Dilworth MJ,Willems A,Howieson JG

更新日期：2012-11-01 00:00:00

abstract：:Five strains of the filamentous bacterium 'Nostocoida limicola' III were successfully isolated into pure culture from samples of activated sludge biomass from five plants in Australia. 16S rRNA gene sequence analyses showed that all isolates were members of the Planctomycetales, most closely related to Isosphaera pall...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu JR,McKenzie CA,Seviour EM,Webb RI,Blackall LL,Saint CP,Seviour RJ

更新日期：2001-01-01 00:00:00

abstract：:A novel actinomycete strain, designated YIM 61105(T), was isolated from a leaf of Maytenus austroyunnanensis from the tropical rainforest in Xishuangbanna, Yunnan Province, south-west China. A 16S rRNA gene sequence analysis revealed that the organism belonged to the phylogenetic cluster of the genus Nonomuraea and wa...

journal_title：International journal of systematic and evolutionary microbiology

authors： Qin S,Zhao GZ,Klenk HP,Li J,Zhu WY,Xu LH,Li WJ

更新日期：2009-11-01 00:00:00

abstract：:A Gram-stain-positive, non-motile actinomycete, designated strain YIM 48875(T), was isolated from rhizosphere soil of Bletilla striata and its taxonomic position was established by using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequence data showed that strain YIM 48875(T) belonged to the ge...

journal_title：International journal of systematic and evolutionary microbiology

authors： Cao YR,Wang Q,Jin RX,Jiang Y,Lai HX,He WX,Xu LH,Jiang CL

更新日期：2011-06-01 00:00:00

abstract：:A study was undertaken to determine the prevalence and diversity of species of the genus Arcobacter in pig and dairy cattle manure, which led to the identification of strains AF1440T, AF1430 and AF1581. Initially identified as Arcobacter butzleri based on colony morphology and initial PCR-confirmation tests, analyses ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Whiteduck-Léveillée K,Whiteduck-Léveillée J,Cloutier M,Tambong JT,Xu R,Topp E,Arts MT,Chao J,Adam Z,André Lévesque C,Lapen DR,Villemur R,Talbot G,Khan IUH

更新日期：2015-08-01 00:00:00

abstract：:A bacterial strain, designated WDS2C18T, was isolated from a marine solar saltern from the coast of Weihai, Shandong Province, China. Cells of strain WDS2C18T were long rod-shaped, red, and approximately 6.0-12.0 µm in length and 0.3-0.4 µm in width. The strain was Gram-stain-negative, facultatively anaerobic, heterot...

journal_title：International journal of systematic and evolutionary microbiology

authors： Xia J,Dunlap CA,Flor-Weiler L,Rooney AP,Chen GJ,Du ZJ

更新日期：2016-09-01 00:00:00

abstract：:A Gram-stain-negative, facultative anaerobic and oligotrophic, rod-shaped, and motile with single polar flagellum bacterial strain, designed M11-4T was isolated from mangrove sediment in Yunxiao Mangrove National Nature Reserve, China. Growth was observed at temperatures from 10 to 40 °C (optimum 30 °C), at salinities...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liao H,Li Y,Guo X,Lin X,Lai Q,Xu H,Zheng T,Tian Y

更新日期：2017-12-01 00:00:00

abstract：:Bryobacter aggregatus gen. nov., sp. nov. is proposed to accommodate three strains of slowly growing, chemo-organotrophic bacteria isolated from acidic Sphagnum peat bogs. These bacteria were strictly aerobic, Gram-negative, colourless, non-motile coccoids or short rods that multiplied by normal cell division and form...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kulichevskaya IS,Suzina NE,Liesack W,Dedysh SN

更新日期：2010-02-01 00:00:00

abstract：:A novel methane-producing archaeon, designated strain HASU(T), was isolated from a lotus field. Cells were Gram-negative, non-motile, irregular cocci, 2-3 mum in diameter, and occurred singly. Growth was observed at 15-40 degrees C (optimum, 37 degrees C) and pH 6.5-7.5 (optimum, pH 7.0). The G+C content of the genomi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Imachi H,Sakai S,Nagai H,Yamaguchi T,Takai K

更新日期：2009-04-01 00:00:00

abstract：:Two xylose-utilizing yeast strains isolated from rotten wood collected in the rainforest in different mountains of Hainan province, southern China, were studied. Sequence analysis of the large subunit rDNA D1/D2 domain and internal transcribed spacer region revealed that the strains represent a novel anamorphic yeast ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Guo X,Zhu H,Bai FY

更新日期：2012-01-01 00:00:00

abstract：:Genome comparisons based on average nucleotide identity (ANI) values of four strains currently classified as Polynucleobacter necessarius subsp. asymbioticus resulted in ANI values of 75.7-78.4 %, suggesting that each of those strains represents a separate species. The species P. necessarius was proposed by Heckmann a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahn MW,Schmidt J,Pitt A,Taipale SJ,Lang E

更新日期：2016-08-01 00:00:00

abstract：:Five strains, designated WS 4672T, WS 4998, WS 4992T, WS 4997 and WS 5000, isolated from bovine raw milk formed two individual groups in a phylogenetic analysis. The most similar species on the basis of 16S rRNA gene sequences were Pseudomonas azotoformans IAM 1603T, Pseudomonas gessardii CIP 105469T and Pseudomonas l...

journal_title：International journal of systematic and evolutionary microbiology

authors： von Neubeck M,Huptas C,Glück C,Krewinkel M,Stoeckel M,Stressler T,Fischer L,Hinrichs J,Scherer S,Wenning M

更新日期：2017-06-01 00:00:00

abstract：:A Gram-negative, aerobic, motile and rod-shaped bacterium, designated strain T7-07(T), was isolated from compost in Daejeon, Korea. Phylogenetic analysis based on 16S rRNA gene sequencing showed that strain T7-07(T) had 99.0% gene sequence similarity with Arenimonas malthae KACC 14618(T) and 94.7-95.9% with other reco...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jin L,Kim KK,An KG,Oh HM,Lee ST

更新日期：2012-07-01 00:00:00

abstract：:A strictly aerobic, thermophilic, gram-positive, spore-producing, rod-shaped bacterium (2.0-10.0 x 0.3 microm), designated isolate C21T, was isolated from a sample collected from an open drain run-off channel of a bore in the Great Artesian Basin of Australia (New Lorne Bore, registered number 17263). Isolate C21T gre...

journal_title：International journal of systematic and evolutionary microbiology

authors： Spanevello MD,Yamamoto H,Patel BKC

更新日期：2002-05-01 00:00:00