Larkinella soli sp. nov., isolated from biological soil crusts.

abstract：:A moderately halophilic bacterium, strain SS20(T), capable of growing at salinities of 1-20 % (w/v) NaCl was isolated from a solar saltern of the Dangjin area in Korea and was characterized taxonomically. Strain SS20(T) was a Gram-negative bacterium comprising motile, short rods. Its major cellular fatty acids were C(...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lim JM,Yoon JH,Lee JC,Jeon CO,Park DJ,Sung C,Kim CJ

更新日期：2004-11-01 00:00:00

abstract：:A chemolithotrophic sulfur-oxidizing bacterium, strain aks1T, was isolated from sediment of a brackish lake in Japan. The cells were curved rod-shaped and Gram-stain-negative. The G+C content of the genomic DNA was 53 mol%. The major components in the cellular fatty acid profile were C16 : 0 and summed feature 3 (C16 ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kojima H,Fukui M

更新日期：2016-09-01 00:00:00

abstract：:Three Gram-positive, rod-shaped bacterial strains were isolated from the drinking water supply system of the Hungarian capital, Budapest. Phylogenetic analysis on the basis of 16S rRNA gene sequence comparison revealed that the isolates represented a distinct cluster within the clade of the genus Nocardioides and were...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tóth EM,Kéki Z,Makk J,Homonnay ZG,Márialigeti K,Schumann P

更新日期：2011-03-01 00:00:00

abstract：:Twenty-one homofermentative lactic acid bacteria were isolated from fermented cummingcordia (pobuzihi), a traditional food in Taiwan. The isolates had identical 16S rRNA gene sequences that were distinct from those of other lactobacilli, and their closest neighbours in the 16S rRNA gene sequence phylogenetic tree were...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen YS,Miyashita M,Suzuki KI,Sato H,Hsu JS,Yanagida F

更新日期：2010-08-01 00:00:00

abstract：:A Gram-staining-positive, aerobic organism, isolated from the Red Sea sponge Spheciospongia vagabunda was investigated to determine its taxonomic position. On the basis of results of 16S rRNA gene sequence analysis strain EG49(T) was most closely related to Actinokineospora cibodasensis and Actinokineospora baliensis ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kämpfer P,Glaeser SP,Busse HJ,Abdelmohsen UR,Ahmed S,Hentschel U

更新日期：2015-03-01 00:00:00

abstract：:A Gram-staining-positive, motile, facultatively anaerobic, endospore-forming and rod-shaped bacterium, designated strain CJ32(T), was isolated from ginseng soil at Geumsan in Korea. The isolate grew optimally at 30 °C, 2% (w/v) NaCl and pH 7.0. Colonies of strain CJ32(T) were beige and circular with an entire margin o...

journal_title：International journal of systematic and evolutionary microbiology

authors： Choi JH,Cha CJ

更新日期：2014-03-01 00:00:00

abstract：:Strains 2B12T, FVG1-MFV-O17 and FVG10-MFV-A16 were isolated from fresh water samples collected in Asia and Europe. The nucleotide sequences of the gapA barcodes revealed that all three strains belonged to the same cluster within the genus Dickeya. Using 13 housekeeping genes (fusA, rpoD, rpoS, glyA, purA, groEL, gapA,...

journal_title：International journal of systematic and evolutionary microbiology

authors： Oulghazi S,Pédron J,Cigna J,Lau YY,Moumni M,Van Gijsegem F,Chan KG,Faure D

更新日期：2019-08-01 00:00:00

abstract：:A halotolerant actinobacterial strain, designated EGI 80423T, was isolated from a desert soil of Xinjiang, north-west China, and subjected to a polyphasic taxonomic characterization. Strain EGI 80423T grew at pH 7.0-10.0 and with 0-14.0% (w/v) NaCl, optimally at pH 8.0-9.0 and with 2.0-4.0% (w/v) NaCl. Cells of strain...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang YG,Wang HF,Yang LL,Guo JW,Xiao M,Huang MJ,Nabil Hozzein W,Li WJ

更新日期：2016-04-01 00:00:00

abstract：:Five bacterial strains isolated from bats of the family Vespertilionidae were characterized by phenotypic tests and multilocus sequence analysis (MLSA) using the 16S rRNA gene and four housekeeping genes (rpoA, rpoB, infB, recN). Phylogenetic analyses of individual and combined datasets indicated that the five strains...

journal_title：International journal of systematic and evolutionary microbiology

authors： Mühldorfer K,Speck S,Wibbelt G

更新日期：2014-07-01 00:00:00

abstract：:Two Gram-staining-negative, aerobic, rod-shaped bacterial strains, designated Za6a-12(T) and Za6a-17, were isolated from seawater of the East China Sea. Cells of Za6a-12(T) and Za6a-17 were approximately 1.5-2.0 µm×0.5-0.7 µm and motile by a single polar flagellum. Strains grew optimally at pH 7.5-8.0, 28 °C, and in t...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sun C,Huo YY,Liu JJ,Pan J,Qi YZ,Zhang XQ,Zhang Y,Zheng G,Wu M

更新日期：2014-06-01 00:00:00

abstract：:A methanogenic organism from the domain Archaea, designated strain T10(T), was isolated from groundwater sampled from a deep diatomaceous shale formation located in Horonobe, Hokkaido, Japan. The strain utilized H2/CO2 and formate as substrates for methanogenesis. Cells were strictly anaerobic, Gram-negative-staining,...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shimizu S,Ueno A,Tamamura S,Naganuma T,Kaneko K

更新日期：2013-11-01 00:00:00

abstract：:Following the exposure of a biofilm sample from a hydrothermal spring cave (Gellért Hill, Budapest, Hungary) to gamma radiation, a strain designated FeSTC15-38T was isolated and studied by polyphasic taxonomic methods. The spherical-shaped cells stained Gram-negative, and were aerobic and non-motile. The pH range for ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Makk J,Tóth EM,Anda D,Pál S,Schumann P,Kovács AL,Mádl-Szőnyi J,Márialigeti K,Borsodi AK

更新日期：2016-12-01 00:00:00

abstract：:Strain GAM6-1T is a novel, strictly anaerobic, non-spore-forming, Gram-stain-positive bacterium that was isolated from the faeces of a healthy individual. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain GAM6-1T was most closely related to Blautia producta ATCC 27340T (95.7 % sequence simil...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park SK,Kim MS,Roh SW,Bae JW

更新日期：2012-04-01 00:00:00

abstract：:Strain CCUG 50899, a Gram-negative, rod-shaped, non-spore-forming, motile bacterium isolated from industrial environment in Sweden and tentatively assigned to the species Ochrobactrum anthropi, was studied in order to clarify its taxonomic status. 16S rRNA gene sequence similarities placed the strain in the genus Ochr...

journal_title：International journal of systematic and evolutionary microbiology

authors： Huber B,Scholz HC,Kämpfer P,Falsen E,Langer S,Busse HJ

更新日期：2010-02-01 00:00:00

abstract：:Vigna unguiculata, Vigna radiata and Arachis hypogaea growing in Ethiopia are nodulated by a genetically diverse group of Bradyrhizobium strains. To determine the genetic identity and symbiotic effectiveness of these bacteria, a collection of 36 test strains originating from the root nodules of the three hosts was inv...

journal_title：International journal of systematic and evolutionary microbiology

authors： Degefu T,Wolde-Meskel E,Rasche F

更新日期：2018-01-01 00:00:00

abstract：:This paper describes a phenotypic and genotypic investigation of the taxonomy of [Haemophilus] paragallinarum, Pasteurella gallinarum, Pasteurella avium and Pasteurella volantium, a major subcluster within the avian 16S rRNA cluster 18 of the family Pasteurellaceae. An extended phenotypic characterization was performe...

journal_title：International journal of systematic and evolutionary microbiology

authors： Blackall PJ,Christensen H,Beckenham T,Blackall LL,Bisgaard M

更新日期：2005-01-01 00:00:00

abstract：:A Gram-stain-negative, rod-shaped, motile by gliding and strictly aerobic bacterial strain, named 1-32T, was isolated from soil of the Ordos grassland in Inner Mongolia, PR China. Strain 1-32T showed highest 16S rRNA gene sequence similarities to Pedobacter luteus N7d-4T (95.4 %), Pedobacter oryzae DSM 19973T (95.3 %)...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yuan K,Cao M,Li J,Wang G

更新日期：2018-04-01 00:00:00

abstract：:A novel thermophilic, sulfur-oxidizing Gram-negative bacterium, designated strain SS-5T, was isolated from the Calcite Hot Springs in Yellowstone National Park, USA. The cells were motile rods (1.2-2.8 microm long and 0.6-0.8 microm wide). The new isolate was a facultative heterotroph capable of using elemental sulfur...

journal_title：International journal of systematic and evolutionary microbiology

authors： Nakagawa S,Shtaih Z,Banta A,Beveridge TJ,Sako Y,Reysenbach AL

更新日期：2005-11-01 00:00:00

abstract：:A heterotrophic, non-fermentative, denitrifying isolate, designated strain BD1(T), was obtained from a seawater sample collected in the shallow coastal region of An-Ping Harbour, Tainan, Taiwan. The cells of strain BD1(T) were Gram-negative. Cells grown in broth cultures were curved rods that were motile by means of a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jean WD,Chen JS,Lin YT,Shieh WY

更新日期：2006-10-01 00:00:00

abstract：:One beige-pigmented, Gram-stain-negative, rod-shaped bacterium, strain E3/4T, was isolated from a zebrafish, Danio rerio. Phylogenetic analysis based on nearly full-length 16S rRNA gene sequences showed that the isolate shared 98.5 % 16S rRNA gene sequence identity to the type strain of Undibacterium macrobrachii and ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kämpfer P,Irgang R,Busse HJ,Poblete-Morales M,Kleinhagauer T,Glaeser SP,Avendaño-Herrera R

更新日期：2016-09-01 00:00:00

abstract：:A psychrotolerant strain, 8H1(T), was isolated from soil samples collected in Isla de los Estados, Ushuaia, Argentina. Cells were Gram-negative, aerobic, straight rods, occurring singly or in pairs, non-spore-forming and motile by means of two polar flagella. The isolate was able to grow in the range 4-35 °C, with opt...

journal_title：International journal of systematic and evolutionary microbiology

authors： Arnau VG,Sánchez LA,Delgado OD

更新日期：2015-02-01 00:00:00

abstract：:A novel rod-shaped, Gram-stain-negative, non-gliding and aerobic strain surrounded by a multilayer capsule, designated 4-T-2T, was isolated from a till sample of Collins glacier front, Antarctica. The bacterium formed yellow, circular, convex and smooth colonies. Growth occurred at 4-28 °C (optimum18-20 °C), at pH 7.0...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang Y,Jiang F,Chang X,Qiu X,Ren L,Qu Z,Deng S,Da X,Fang C,Peng F

更新日期：2016-01-01 00:00:00

abstract：:Two bacterial strains isolated from different hospitals in Japan were subjected to a polyphasic analysis. Strains IFM 0803(T) and IFM 10383 were found to have morphological, biochemical, physiological and chemotaxonomic properties consistent with their classification in the genus Nocardia. Strains IFM 0803(T) and IFM ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Iida S,Kageyama A,Yazawa K,Uchiyama N,Toyohara T,Chohnabayashi N,Suzuki SI,Nomura F,Kroppenstedt RM,Mikami Y

更新日期：2006-06-01 00:00:00

abstract：:Multiple isolates belonging to the ascomycetous genus Zygotorulaspora were obtained from forest soils and tree bark in Shiba Prefecture in Japan, and Lake Daniels, Lewis Pass, in New Zealand. Phylogenetic analyses employing combined sequences of the D1/D2 domain and ITS region support the recognition of two new specie...

journal_title：International journal of systematic and evolutionary microbiology

authors： Carvalho C,Tomás A,Libkind D,Imanishi Y,Sampaio JP

更新日期：2018-08-01 00:00:00

abstract：:Two bacterial strains, HKU50T and HKU46, were isolated in Hong Kong from the blood culture and the peritoneal dialysis effluent of two patients. The strains are Gram-stain-positive, acid-fast, non-motile, non-sporulating bacilli. They grow on Columbia agar with 5 % defibrinated sheep blood and brain-heart infusion aga...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tsang CC,Xiong L,Poon RWS,Chen JHK,Leung KW,Lam JYW,Wu AKL,Chan JFW,Lau SKP,Woo PCY

更新日期：2016-10-01 00:00:00

abstract：:Eleven strains of anaerobic Gram-negative bacilli isolated from the human oral cavity were subjected to a comprehensive range of phenotypic and genotypic tests and were found to comprise two homogeneous groups, designated E2 and E4. 16S rRNA gene sequence analysis revealed that members of both groups belonged to the g...

journal_title：International journal of systematic and evolutionary microbiology

authors： Downes J,Sutcliffe I,Tanner ACR,Wade WG

更新日期：2005-07-01 00:00:00

abstract：:A Gram-positive, moderately halophilic rod, designated X5BT, was isolated from saline mud of the hypersaline lake Aran-Bidgol in Iran. Strain X5BT was a strictly aerobic, motile bacterium that produced ellipsoidal endospores at a central-subterminal position in non-swollen sporangia. The isolate grew at pH 7.0-10.0 (o...

journal_title：International journal of systematic and evolutionary microbiology

authors： Bagheri M,Didari M,Amoozegar MA,Schumann P,Sánchez-Porro C,Mehrshad M,Ventosa A

更新日期：2012-04-01 00:00:00

abstract：:Three strains of budding, ellipsoid-shaped and rosette-forming bacteria were isolated from acidic Sphagnum-dominated boreal wetlands of northern Russia and were designated strains MPL7T, MOB77 and SB2. The presence of crateriform pits and numerous fibrillar appendages on the cell surface and an unusual spur-like proje...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kulichevskaya IS,Ivanova AO,Belova SE,Baulina OI,Bodelier PLE,Rijpstra WIC,Sinninghe Damsté JS,Zavarzin GA,Dedysh SN

更新日期：2007-11-01 00:00:00

abstract：:Genome comparisons based on average nucleotide identity (ANI) values of four strains currently classified as Polynucleobacter necessarius subsp. asymbioticus resulted in ANI values of 75.7-78.4 %, suggesting that each of those strains represents a separate species. The species P. necessarius was proposed by Heckmann a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahn MW,Schmidt J,Pitt A,Taipale SJ,Lang E

更新日期：2016-08-01 00:00:00

abstract：:A yellow-pigmented, Gram-negative, rod-shaped, strictly aerobic bacterium (strain UST050418-085(T)) was isolated from the surface of a marine sponge, Myxilla incrustans, at Friday Harbor, WA, USA. The DNA G+C content of this strain was 34.6 mol%. The predominant fatty acids were i15 : 0, a15 : 0, i15 : 1, i16 : 0, i17...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee OO,Lau SCK,Tsoi MMY,Li X,Plakhotnikova I,Dobretsov S,Wu MCS,Wong PK,Qian PY

更新日期：2006-08-01 00:00:00