Abstract:
:DNA replication is a prerequisite for cell proliferation, yet it can be increasingly challenging for a eukaryotic cell to faithfully duplicate its genome as its size and complexity expands. Dormant origins now emerge as a key component for cells to successfully accomplish such a demanding but essential task. In this perspective, we will first provide an overview of the fundamental processes eukaryotic cells have developed to regulate origin licensing and firing. With a special focus on mammalian systems, we will then highlight the role of dormant origins in preventing replication-associated genome instability and their functional interplay with proteins involved in the DNA damage repair response for tumor suppression. Lastly, deficiencies in the origin licensing machinery will be discussed in relation to their influence on stem cell maintenance and human diseases.
journal_name
DNA Repair (Amst)journal_title
DNA repairauthors
Shima N,Pederson KDdoi
10.1016/j.dnarep.2017.06.019subject
Has Abstractpub_date
2017-08-01 00:00:00pages
166-173eissn
1568-7864issn
1568-7856pii
S1568-7864(17)30219-7journal_volume
56pub_type
杂志文章,评审相关文献
DNA REPAIR文献大全abstract::Chk1 is a protein kinase that acts as a key signal transducer within the complex network responsible of the cellular response to different DNA damages. It is a conserved element along the eukaryotic kingdom, together with a second checkpoint kinase, called Chk2/Rad53. In fact, all organisms studied so far carried at l...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2009.01.023
更新日期:2009-06-04 00:00:00
abstract::Double-strand breaks (DSBs) are among the most lethal DNA lesions, and a variety of pathways have evolved to manage their repair in a timely fashion. One such pathway is homologous recombination (HR), in which information from an undamaged donor site is used as a template for repair. Although many of the biochemical s...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2017.06.012
更新日期:2017-08-01 00:00:00
abstract::Reactive oxygen species drive the oxidation of guanine to 8-oxoguanine (8oxoG), which threatens genome integrity. The repair of 8oxoG is carried out by base excision repair enzymes in Bacteria and Eukarya, however, little is known about archaeal 8oxoG repair. This study identifies a member of the Ogg-subfamily archaea...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2019.102767
更新日期:2020-02-01 00:00:00
abstract::AA8 Chinese hamster ovary cells were treated with halogenated nucleosides analogues of thymidine, namely CldU, 5-iodo-2'-deoxyuridine (IdU), and 5-bromo-2'-deoxyuridine (BrdU), following different experimental protocols. The purpose was to see whether incorporation of exogenous pyrimidine analogues into DNA could inte...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/s1568-7864(03)00044-2
更新日期:2003-06-11 00:00:00
abstract::The DNA damage response (DDR) pathway's primary purpose is to maintain the genome structure's integrity and stability. A great deal of effort has done to understand the exact molecular mechanisms of non-coding RNAs, such as lncRNA, miRNAs, and circRNAs, in distinct cellular and genomic processes and cancer progression...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2020.103036
更新日期:2021-01-07 00:00:00
abstract::ATM and ATR are stress-response kinases which respond to a variety of insults including ionizing radiation, replication arrest, ultraviolet radiation and hypoxia/re-oxygenation. Hypoxia occupies a unique niche in the study of both ATR- and ATM-mediated checkpoint pathways. Hypoxia is a physiologically significant stre...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2004.03.035
更新日期:2004-08-01 00:00:00
abstract::Processivity clamps that hold DNA polymerases to DNA for processivity were the first proteins known to encircle the DNA duplex. At the time, polymerase processivity was thought to be the only function of ring shaped processivity clamps. But studies from many laboratories have identified numerous proteins that bind and...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2015.01.015
更新日期:2015-05-01 00:00:00
abstract::DNA mismatch repair is an evolutionarily conserved repair pathway that corrects replication errors. In most prokaryotes and all eukaryotes, the mismatch repair protein MutL is a sequence-unspecific endonuclease that nicks the newly synthesized strand and marks it for repair. Although the sequence of the endonuclease d...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2018.10.003
更新日期:2019-01-01 00:00:00
abstract::Bacterial RarA is thought to play crucial roles in the cellular response to blocked replication forks. We show that lack of Bacillus subtilis RarA renders cells very sensitive to H2O2, but not to methyl methane sulfonate or 4-nitroquinoline-1-oxide. RarA is epistatic to RecA in response to DNA damage. Inactivation of ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2019.03.010
更新日期:2019-06-01 00:00:00
abstract::The Karpas-620 human myeloma cell line (HMCL) expresses high levels of Cyclin D1 (CCND1), but has a der(8)t(8;11) and a der(14)t(8;14), and not a conventional t(11;14). Fluorescent in situ hybridization (FISH) and array comparative genomic hybridization (aCGH) studies suggest that der(14)t(11;14) from a primary transl...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2008.11.010
更新日期:2009-03-01 00:00:00
abstract::Nonhomologous end joining (NHEJ) is the major pathway for the repair of DNA double strand breaks (DSBs) in human cells. NHEJ requires the catalytic subunit of the DNA-dependent protein kinase (DNA-PKcs), Ku70, Ku80, XRCC4, DNA ligase IV and Artemis, as well as DNA polymerases mu and lambda and polynucleotide kinase. R...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2008.06.015
更新日期:2008-10-01 00:00:00
abstract::A large number of lymphoid malignancies is characterized by specific chromosomal translocations, which are closely linked to the initial steps of pathogenesis. The hallmark of these translocations is the ectopic activation of a silent proto-oncogene through its relocation at the vicinity of an active regulatory elemen...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2006.05.015
更新日期:2006-09-08 00:00:00
abstract::Stable expression of Rad51 siRNA was used to generate mouse hybridoma cell lines in which endogenous Rad51 levels were depleted by as much as 60%. Stable Rad51 knockdowns feature reduced homologous recombination responses. The relative ease with which stable Rad51 knockdowns were recovered was surprising, given the em...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2013.10.006
更新日期:2013-12-01 00:00:00
abstract::In eukaryotes, mutations in a number of genes that affect DNA damage checkpoints or DNA replication also affect telomere length [Curr. Opin. Cell Biol. 13 (2001) 281]. Saccharomyces cerevisae strains with mutations in the TEL1 gene (encoding an ATM-like protein kinase) have very short telomeres, as do strains with mut...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/s1568-7864(03)00115-0
更新日期:2003-09-18 00:00:00
abstract::The accuracy of DNA synthesis depends on the accuracy of the polymerase as well as the quality and concentration(s) of the available 5'-deoxynucleoside-triphosphate DNA precursors (dNTPs). The relationships between dNTPs and error rates have been studied in vitro, but only limited insights exist into these correlation...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2012.10.011
更新日期:2013-01-01 00:00:00
abstract::Interaction between MutS and the replication factor β clamp has been extensively studied in a Mismatch Repair context; however, its functional consequences are not well understood. We have analyzed the role of the MutS-β clamp interaction in Pseudomonas aeruginosa by characterizing a β clamp binding motif mutant, deno...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2012.01.015
更新日期:2012-05-01 00:00:00
abstract::Base excision repair (BER) of damaged or inappropriate bases in DNA has been reported to take place by single nucleotide insertion or through incorporation of several nucleotides, termed short-patch and long-patch repair, respectively. We found that extracts from proliferating and non-proliferating cells both had capa...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2009.04.002
更新日期:2009-07-04 00:00:00
abstract::DNA post-replication repair (PRR) functions to bypass replication-blocking lesions and is subdivided into two parallel pathways: error-prone translesion DNA synthesis and error-free PRR. While both pathways are dependent on the ubiquitination of PCNA, error-free PRR utilizes noncanonical K63-linked polyubiquitinated P...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2014.02.016
更新日期:2014-04-01 00:00:00
abstract::Prediabetes is the preclinical stage of type 2 diabetes mellitus (T2DM) with intermediate state of hyperglycemia. Hyperglycemia results in a state of oxidative stress, which may contribute to the production of insulin resistance, β-cell dysfunction and long-term complications of diabetes. Novel approaches are required...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2016.09.004
更新日期:2016-12-01 00:00:00
abstract::Ionizing radiation induces clustered DNA damaged sites, defined as two or more lesions formed within one or two helical turns of the DNA through passage of a single radiation track. It is now established that clustered DNA damage sites are found in cells and present a challenge to the repair machinery of the cell but ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2007.07.003
更新日期:2007-12-01 00:00:00
abstract::The extremely radiation resistant bacterium, Deinococcus radiodurans, contains a spectrum of genes that encode for multiple activities that repair DNA damage. We have cloned and expressed the product of three predicted uracil-DNA glycosylases to determine their biochemical function. DR0689 is a homologue of the Escher...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2003.10.011
更新日期:2004-02-03 00:00:00
abstract::RecQ5 belongs to the RecQ DNA helicase family that includes genes causative of Bloom, Werner, and Rothmund-Thomson syndromes. Although no human disease has been genetically linked to a mutation in RecQ5, Drosophila melanogaster RecQ5 is highly expressed in early embryos, suggesting an important role for it in the DNA ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2008.10.007
更新日期:2009-02-01 00:00:00
abstract::Hydrolytic deamination of DNA cytosine residues results in U/G mispairs, pre-mutagenic lesions threatening long-term genetic stability. Hence, DNA uracil repair is ubiquitous throughout all extant life forms and base excision repair, triggered by a uracil DNA glycosylase (UDG), is the mechanistic paradigm adopted, as ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2010.01.004
更新日期:2010-04-04 00:00:00
abstract::Ataxia Telangiectasia (A-T) is a progressive childhood disorder characterized most notably by cerebellar degeneration and predisposition to cancer. A-T is caused by mutations in the kinase ATM, a master regulator of the DNA double-strand break response. In addition to DNA-damage signaling defects, A-T cells display mi...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2013.11.002
更新日期:2014-01-01 00:00:00
abstract::The Escherichia coli orf135 gene encodes a 15.4kDa protein with homology to the MutT family of nucleotide hydrolases. The orf135 gene was cloned within a glutathione S-transferase (GST) fusion protein expression vector, which was used to overproduce the GST-Orf135 fusion protein in E. coli. The fusion protein thus obt...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/s1568-7864(02)00057-5
更新日期:2002-07-17 00:00:00
abstract::The proposed mechanism for transcription coupled nucleotide excision repair (TCR) invokes RNA polymerase (RNAP) blocked at a DNA lesion as a signal to initiate repair. In Escherichia coli, TCR requires the interaction of RNAP with a transcription-repair coupling factor encoded by the mfd gene. The interaction between ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2007.04.002
更新日期:2007-10-01 00:00:00
abstract::Genomic instability has been proposed to play an important role in cancer by accelerating the accumulation of genetic changes responsible for cancer cell evolution. One mechanism for chromosome instability is through the loss of telomeres, which are DNA-protein complexes that protect the ends of chromosomes and preven...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2006.05.030
更新日期:2006-09-08 00:00:00
abstract::All organisms rely on integrated networks to repair DNA double-strand breaks (DSBs) in order to preserve the integrity of the genetic information, to re-establish replication, and to ensure proper chromosomal segregation. Genetic, cytological, biochemical and structural approaches have been used to analyze how Bacillu...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2012.12.005
更新日期:2013-03-01 00:00:00
abstract::Why does a constant barrage of DNA damage lead to disease in some individuals, while others remain healthy? This article surveys current work addressing the implications of inter-individual variation in DNA repair capacity for human health, and discusses the status of DNA repair assays as potential clinical tools for ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2014.03.009
更新日期:2014-07-01 00:00:00
abstract::Gene amplification, a key mechanism for oncogene activation and drug resistance in tumour cells, involves the generation and joining of DNA double-strand breaks. Amplified DNA can be carried either on intra-chromosomal arrays or on extra-chromosomal elements (double minutes). We previously showed that, in rodent cells...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2008.08.015
更新日期:2009-01-01 00:00:00