A new GH13 α-glucosidase from alkaliphilic Bacillus pseudofirmus 703 with both exo-α-l, 4-glucosidase and oligo-l, 6-glucosidase activities toward amylopectin.

Abstract:

:Debranching of (1, 6)-α-linkages in starch is of great significance as it is widely used in different industries. In recent years, identifying a single potential enzyme that could debranch (1, 6)-α-linkages and cleave (1, 4)-α-linkages brought great interest as amylopectin possessed both (1, 4)-α- and (1, 6)-α-linkages. In the present study, a 64\,kDa exo-α-l, 4-glucosidase from Bacillus pseudofirmus 703, annotated as Amy112, was cloned and characterized. Biochemical analysis indicated that heterologous Amy112 expressed in Escherichia coli exhibited a high activity against amylopectin, with the optimal temperature and pH of 40°C and pH 7.0, respectively. Addition of K+ ions improved the amy112 activity by 12%, but Li+, Ca2+ and Mg2+ ions showed no significant effect. Amy112 sequence homology revealed that it belonged to glycoside hydrolase family 13, showing 65% identity with α-glucosidase GSJ from Geobacillus sp. HTA-462. This is the first report indicating that Amy112 from B. pseudofirmus 703 belongs to GH13 enzyme family, having both exo-α-1, 4-glucosidase and oligo-l, 6-glucosidase activities. However, no transglycosylation activity was detected in LC-MS analysis. Amy112 would be of great significance of being utilized to debranch starch in different industries in a cost effective manner.

journal_name

Int J Biol Macromol

authors

Wang S,Wang Q,Zhou Y,Lu Z,Zhang G,Ma Y

doi

10.1016/j.ijbiomac.2017.03.129

subject

Has Abstract

pub_date

2017-08-01 00:00:00

pages

973-982

eissn

0141-8130

issn

1879-0003

pii

S0141-8130(17)30338-0

journal_volume

101

pub_type

杂志文章
  • On the temperature-induced coil to globule transition of poly-N-isopropylacrylamide in dilute aqueous solutions.

    abstract::Poly-N-isopropylacrylamide (PNIPAM) is a chemical isomer of poly-leucine, having the polar peptide group in the side-chain rather than in the backbone. It has been demonstrated experimentally that PNIPAM dissolved in aqueous solution undergoes a collapse transition from coil to globule on increasing temperature above ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/s0141-8130(99)00122-1

    authors: Graziano G

    更新日期:2000-03-16 00:00:00

  • Evaluation of chitosan hydrochloride-alginate as enteric micro-probiotic-carrier with dual protective barriers.

    abstract::In this study, the cells-free and cells-loaded chitosan hydrochloride-alginate (CHC-Alg) microcapsules were firstly fabricated with polyelectrolyte complexes via an orifice-polymerization method. Scanning electron microscope images showed that the CHC-Alg microcapsules had a typical shell-core structure and the model ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2016.09.034

    authors: Wu QX,Xu X,Xie Q,Tong WY,Chen Y

    更新日期:2016-12-01 00:00:00

  • Dielectric studies of proton transport in air-dried fully calcified and decalcified bone.

    abstract::Measurements of dielectric properties of calcified and decalcified bone were made in the electric field frequency range of 10(1)-10(5) Hz and at temperatures from 22 to 250 degrees C. The temperature dependencies of the complex dielectric constant of bone revealed two main molecular processes. The first process corres...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/0141-8130(95)01052-1

    authors: Marzec E,Kubisz L,Jaroszyk F

    更新日期:1996-02-01 00:00:00

  • Ultrafiltration isolation, hypoglycemic activity analysis and structural characterization of polysaccharides from Brasenia schreberi.

    abstract::Brasenia schreberi (B. schreberi) is a rare and precious vegetable, which coat with a gelatinous mucilage. This study is aiming to investigate the relationship between structural characteristics and hypoglycemic activities of polysaccharides with different molecular weight (Mw) range. Three polysaccharides fractions, ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.05.129

    authors: Feng S,Luan D,Ning K,Shao P,Sun P

    更新日期:2019-08-15 00:00:00

  • The interaction between residues 62 and 193 play a key role in activity and structural stability of arginine kinase.

    abstract::The purpose of this study is to clarify that the amino acid residues (Asp62 and Arg193) are responsible for the activity and stability of arginine kinase (AK). The amino acid residues Asp62 (D62) and Arg193 (R193) are strictly conserved in monomeric AKs and form an ion pair in the transition state analogue complex. In...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2011.05.022

    authors: Liu N,Wang JS,Wang WD,Pan JC

    更新日期:2011-10-01 00:00:00

  • Muscle contraction: viscous-like frictional forces and the impulsive model.

    abstract::Apart from a few experimental studies muscle viscosity has not received much recent analytical attention as a determinant of the contractile process. This is surprising, since any muscle cell is 80% water, and may undergo large shape changes during its working cycle. Intuitively one might expect the viscosity of the s...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/s0141-8130(00)00132-x

    authors: Elliott GF,Worthington CR

    更新日期:2000-08-28 00:00:00

  • Molecular recognition between pancreatic lipase and natural and synthetic inhibitors.

    abstract::Pancreatic lipase (PL) is a primary lipase critical for triacylglyceride digestion in humans and is considered as a promising target for the treatment of obesity. Although the current synthetic drugs available for treating obesity have been demonstrated to be effective in inhibiting PL, their prolonged usage results i...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.01.150

    authors: Bello M,Basilio-Antonio L,Fragoso-Vázquez J,Avalos-Soriano A,Correa-Basurto J

    更新日期:2017-05-01 00:00:00

  • Synthesis of chitosan based molecularly imprinted polymer for pipette-tip solid phase extraction of Rhodamine B from chili powder samples.

    abstract::The purpose work is devoted to design of a simple, one-pot and green approach for the synthesis of molecularly imprinted polymer to construct a selective sorbent for pipette-tip solid phase extraction of Rhodamine B from chili powder samples and its subsequence separation and quantification by high performance liquid ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.07.196

    authors: Bagheri AR,Ghaedi M

    更新日期:2019-10-15 00:00:00

  • Expression and biochemical characterization of recombinant α-l-rhamnosidase r-Rha1 from Aspergillus niger JMU-TS528.

    abstract::A putative cDNA of α-l-rhamnosidase was PCR-cloned from Aspergillus niger JMU-TS528 and further extracellular over-expressed in Pichia pastoris GS115. The activity of the recombinant α-l-rhamnosidase r-Rha1 was 711.9U/mL, eightfold higher than the native α-l-rhamnosidase from A. niger JMU-TS528. r-Rha1 is a N-glycosyl...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2015.12.093

    authors: Li L,Yu Y,Zhang X,Jiang Z,Zhu Y,Xiao A,Ni H,Chen F

    更新日期:2016-04-01 00:00:00

  • Inhibition of tau aggregation and associated cytotoxicity on neuron-like cells by calycosin.

    abstract::In this study, the in vitro assembly of tau and anti-amyloidogenic properties of one naturally occurring phytoestrogen, calycosin, was investigated by spectroscopic techniques including ThT and ANS fluorescence, CD, Congo red absorbance as well as TEM analysis. Afterwards the cytotoxicity of different amyloid species ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2020.12.030

    authors: Zhenxia Z,Min L,Peikui Y,Zikai C,Yaqun L,Junli W,Fenlian Y,Yuzhong Z

    更新日期:2020-12-07 00:00:00

  • Antioxidant activities of sulfated pumpkin polysaccharides.

    abstract::Pumpkin polysaccharide was extracted by hot water extraction method. It was modified with chlorosulfonic acid-pyridine to obtain sulfated pumpkin polysaccharides (SP1, SP2) with different degrees of substitution, which was 0.35 and 0.65, respectively. The total sugar contents of pumpkin polysaccharide and its sulfated...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.12.261

    authors: Chen L,Huang G

    更新日期:2019-04-01 00:00:00

  • Effects of Glycyrrhiza glabra polysaccharides on immune and antioxidant activities in high-fat mice.

    abstract::The purpose of this study was to investigate the immune and antioxidant activities of Glycyrrhiza glabra polysaccharides (GGP) in rats fed high-fat diet. The experiment was performed on four groups of growing Kunming mice. The results of the experiment showed a statistically significant decrease in serum antioxidant e...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2009.04.001

    authors: Hong YK,Wu HT,Ma T,Liu WJ,He XJ

    更新日期:2009-07-01 00:00:00

  • Focusing on the functional characterization of the anserinase from Oreochromis niloticus.

    abstract::Carnosine, anserine and homocarnosine are the three most representative compounds of the histidine dipeptides family, widely distributed in mammals in different amounts depending on the species and the tissue considered. Histidine dipeptides are mainly degraded by two different carnosinase homologues: a highly specifi...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.02.118

    authors: Pirone L,Di Gaetano S,Rizzarelli E,Bellia F,Pedone E

    更新日期:2019-06-01 00:00:00

  • Purification and structural characterization of a novel antioxidant and antibacterial protein from Arca inflata.

    abstract::A novel protein (J2-C4) with antioxidant and antibacterial activities was purified from the edible portion of Arca inflata. The purity of J2-C4 was measured to be 97.62% by RP-HPLC analysis, and the molecular weight was 20,537.0 Da by ESI-MS/MS. The isoelectric point of J2-C4 was determined to be 5.18 by IEF-PAGE. Sec...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.05.008

    authors: Wang W,Shi H,Zhu J,Li C,Song L,Yu R

    更新日期:2018-09-01 00:00:00

  • Antimicrobial properties of chitosan and whey protein films applied on fresh cut turkey pieces.

    abstract::The aim of this study was to evaluate the antimicrobial activity of edible films made from a mixture of whey proteins and chitosan, supplemented with cranberry or quince juice, and then applied on fresh cut turkey pieces. Films were used to wrap fresh cut turkey pieces inoculated with S. typhimurium, E. coli, and C. j...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.03.021

    authors: Brink I,Šipailienė A,Leskauskaitė D

    更新日期:2019-06-01 00:00:00

  • Consolidated bioprocessing for production of polyhydroxyalkanotes from red algae Gelidium amansii.

    abstract::Noncompetitive carbon sources such as algae are unconventional and promising raw material for sustainable biofuel production. The capability of one marine bacterium, Saccharophagus degradans 2-40 to degrade red seaweed Gelidium amansii for production of polyhydroxyalkanoates (PHA) was evaluated in this study. S. degra...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.11.084

    authors: Sawant SS,Salunke BK,Kim BS

    更新日期:2018-04-01 00:00:00

  • Chitosan and chitosan nanoparticles induced expression of pathogenesis-related proteins genes enhances biotic stress tolerance in tomato.

    abstract::The aim of this work was to evaluate the possibility of control of wilt disease caused by Fusarium andiyazi through chitosan (CS) and chitosan nanoparticles (CNPs). In the present study, the expression pattern of pathogenesis-related (PR) proteins genes such as PR-1, PR-2 (β-1,3-glucanase), PR-8 (chitinase), and PR-10...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.12.167

    authors: Chun SC,Chandrasekaran M

    更新日期:2019-03-15 00:00:00

  • Characterization of a recombinant d-allulose 3-epimerase from Agrobacterium sp. ATCC 31749 and identification of an important interfacial residue.

    abstract::d-Allulose 3-epimerase (DAEase) catalyzes the epimerization between d-fructose and d-allulose. We had PCR-cloned and overexpressed the gene encoding Agrobacterium sp. ATCC 31749 DAEase (AsDAEase) in Escherichia coli. A high yield of active AsDAEase, 35,300U/L or 1350U/g of wet cells, was acquired with isopropyl β-d-1-...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.02.036

    authors: Tseng WC,Chen CN,Hsu CT,Lee HC,Fang HY,Wang MJ,Wu YH,Fang TY

    更新日期:2018-06-01 00:00:00

  • Co-immobilization multienzyme nanoreactor with co-factor regeneration for conversion of CO2.

    abstract::Multienzymatic conversion of carbon dioxide (CO2) into chemicals has been extensively studied. However, regeneration and reuse of co-factor are still the main problems for the efficient conversion of CO2. In this study, a nanoscale multienzyme reactor was constructed by encapsulating simultaneously carbonic anhydrase ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2020.03.177

    authors: Ren S,Wang Z,Bilal M,Feng Y,Jiang Y,Jia S,Cui J

    更新日期:2020-07-15 00:00:00

  • Polysaccharide from Spirulina platensis ameliorates diphenoxylate-induced constipation symptoms in mice.

    abstract::The aim of this study is to probe new functions of a polysaccharide from Spirulina platensis (PSP) on constipation and intestinal microbiota in mice. Diphenoxylate-induced constipation in mice was treated with different doses of PSP, followed by examining the defecation patterns, levels of acetyl cholinesterase (AchE)...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.04.209

    authors: Ma H,Xiong H,Zhu X,Ji C,Xue J,Li R,Ge B,Cui H

    更新日期:2019-07-15 00:00:00

  • Polysaccharide based bionanocomposites, properties and applications: A review.

    abstract::Bio-nanocomposites, composed of biopolymers and inorganic solids, show dimensions in the nanometer range (1-100nm) which can be widely used in variety of areas owing to multidimensional properties like biocompatibility, antimicrobial activity and biodegradability. Considering these versatile properties of the bio-nano...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2016.07.102

    authors: Zafar R,Zia KM,Tabasum S,Jabeen F,Noreen A,Zuber M

    更新日期:2016-11-01 00:00:00

  • Strategies to expand the therapeutic potential of superoxide dismutase by exploiting delivery approaches.

    abstract::The overproduction of free radicals can cause oxidative-stress damage to a range of biomolecules, and thus potentially contribute to several pathologies, from neurodegenerative disorders to cardiovascular diseases and metabolic disorders. Endogenous antioxidant enzymes, such as superoxide dismutase (SOD), play an impo...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2020.11.149

    authors: Rosa AC,Bruni N,Meineri G,Corsi D,Cavi N,Gastaldi D,Dosio F

    更新日期:2021-01-31 00:00:00

  • Synthesis of magnetic graphene nanocomposites decorated with ionic liquids for fast lead ion removal.

    abstract::Seeking highly-efficient, low-cost and robust methods to remove metal ions from aqueous solutions is very much in demand. Here, we developed a novel magnetic composite bio-adsorbent, graphene oxide and magnetic chitosan-ionic liquids (GOMCS-ILs), for removing Pb(II) from water. This was the first time to combine ionic...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2015.09.061

    authors: Sun W,Li L,Luo C,Fan L

    更新日期:2016-04-01 00:00:00

  • Characterization of intermediate state of myoglobin in the presence of PEG 10 under physiological conditions.

    abstract::The macromolecular crowding progressively has been gaining prominence in recent years as it acts as a sword with double-edge on protein stability and folding, i.e., showing assorted results of having both stabilizing and destabilizing effects. We studied the effects of different concentrations of polyethylene glycol (...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.02.084

    authors: Parray ZA,Shahid S,Ahmad F,Hassan MI,Islam A

    更新日期:2017-06-01 00:00:00

  • Boron stabilizes peroxide mediated changes in the structure of heme proteins.

    abstract::Boron is reported in this study to stabilize the structure of heme proteins exposed to peroxides. The oxidized heme protein (15 microM) was treated with H(2)O(2) (10mM) in 1M glycine-NaOH buffer (pH 9.2) at 25 degrees C in absence/presence of boron, and characterized by visible absorption spectroscopy, gel exclusion c...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2010.05.013

    authors: Ali S,Farooqi H,Prasad R,Naime M,Routray I,Yadav S,Ahmad F

    更新日期:2010-08-01 00:00:00

  • Thermal stability and enzymatic activity of RNase A in the presence of cationic gemini surfactants.

    abstract::The thermal stability and enzymatic activity of bovine pancreatic ribonuclease A (RNase A) have been investigated in the presence of a homologous series of cationic gemini surfactants (alkanediyl-α,ω-bis(hydroxyethyl methyl hexadecyl ammonium bromide)). UV, circular dichorism and fluorescence spectroscopies have been ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2012.01.027

    authors: Amiri R,Bordbar AK,Laurents DV,Khosropour AR,Mohammadpoor-Baltork I

    更新日期:2012-05-01 00:00:00

  • pH-sensitive sodium alginate/poly(vinyl alcohol) hydrogel beads prepared by combined Ca2+ crosslinking and freeze-thawing cycles for controlled release of diclofenac sodium.

    abstract::In order to enhance the drug entrapment efficiency and improve the swelling behaviors of drug delivery system, Ca2+ crosslinking and freeze-thawing (FT) cycle techniques were used to prepare sodium alginate/poly(vinyl alcohol) (SA/PVA) hydrogel beads. The mixture solution of SA and PVA was firstly crosslinked with Ca2...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2010.03.004

    authors: Hua S,Ma H,Li X,Yang H,Wang A

    更新日期:2010-06-01 00:00:00

  • Comparative study of performances of lipase immobilized asymmetric polysulfone and polyether sulfone membranes in olive oil hydrolysis.

    abstract::In the present study, lipase was immobilized via glutaraldehyde crosslinking on the polysulfone and polyether sulfone asymmetric membranes. The results indicated that the overall immobilization of lipase is related to the hydrophobicity of the membrane material and thus higher immobilization is achieved for polysulfon...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2007.10.018

    authors: Gupta S,Yogesh,Javiya S,Bhambi M,Pundir CS,Singh K,Bhattacharya A

    更新日期:2008-03-01 00:00:00

  • Lactobacillus sps. lipase mediated poly (ε-caprolactone) degradation.

    abstract::Polymer degradation through lipase appears to be an enthralling alternative to bulk chemical routes. Poly (ε-caprolactone) (PCL) is an artificial polyester that can be degraded by microbes and enzymes like lipases and esterases. The environmental degradation of PCL is dependent on the activity of bacteria that charact...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2016.11.040

    authors: Khan I,Ray Dutta J,Ganesan R

    更新日期:2017-02-01 00:00:00

  • Preparation, characterization, and 3D printing verification of chitosan/halloysite nanotubes/tea polyphenol nanocomposite films.

    abstract::In this study, chitosan/halloysite nanotubes/tea polyphenol (CS/HNTs/TP) nanocomposite films were prepared by the solution casting method. The scanning electron microscopy (SEM) result showed that the nanocomposite film with a CS/HNTs ratio of 6:4 and a TP content of 10% (C6H4-TP10) had a relatively smooth surface and...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2020.09.253

    authors: Wang Y,Yi S,Lu R,Sameen DE,Ahmed S,Dai J,Qin W,Li S,Liu Y

    更新日期:2021-01-01 00:00:00