Association of IL-10 gene (-1082A>G, -819C>T and -592C>A) polymorphism and its serum level with metabolic syndrome of north Indian subjects.

Abstract:

:Metabolic syndrome (MetS) is an inflammatory disorder, in which various cytokines play important role in tilting balance towards disease state. Interleukin-10 (IL-10) is an important antiinflammatory cytokine, but its genetic polymorphisms and serum levels in Indian MetS subjects are unknown. Three IL-10 gene polymorphisms (-1082A>G (rs1800896), -819C>T (rs1800872) and -592C>A (rs1800871)) were genotyped with PCR-RFLP in MetS subjects (n = 384) and age/sex matched control subjects (n = 386). Serum IL-10 was measured using enzyme-linked immunosorbent assay. Serum IL-10 level was significantly low in MetS subject and significantly correlated with clinicobiochemical parameters of MetS. Of three investigated promoter polymorphisms, IL-10 -819C> T and -592C>A were significantly associated with risk of MetS. The mutant alleles -819T and -592A of IL-10 gene polymorphism were significantly higher in MetS subjects compared to controls. Of the four different haplotypes obtained, common ACC haplotype and rare GTA haplotype of IL-10 polymorphisms were associated with MetS. The mean of fasting insulin and HOMA-IR were significantly different between the genotypes of both -819 C>T and -592C>A polymorphisms of IL-10 in MetS subjects. These results suggested that polymorphisms in IL-10 gene (-819C>T and -592C>A), haplotypes (ACC and GTA) and serum level are significantly associated with risk of MetS. IL- 10 -819C>T and -592C>A polymorphic variants are also significantly associated with insulin level and homeostasis model assessment-insulin resistance in north Indian MetS subjects.

journal_name

J Genet

journal_title

Journal of genetics

authors

Madeshiya AK,Singh S,Dwivedi S,Konwar R,Natu SM,Ghatak A

doi

10.1007/s12041-016-0738-7

subject

Has Abstract

pub_date

2017-03-01 00:00:00

pages

53-64

issue

1

eissn

0022-1333

issn

0973-7731

journal_volume

96

pub_type

杂志文章
  • Neuro-fuzzy model of homocysteine metabolism.

    abstract::In view of well-documented association of hyperhomocysteinaemia with a wide spectrum of diseases and higher incidence of vitamin deficiencies in Indians, we proposed a mathematical model to forecast the role of demographic and genetic variables in influencing homocysteinemetabolism and investigated the influence of li...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-017-0856-x

    authors: Naushad SM,Rama Devi AR,Nivetha S,Lakshmitha G,Stanley AB,Hussain T,Kutala VK

    更新日期:2017-12-01 00:00:00

  • Allelic variations in Glu-1 and Glu-3 loci of historical and modern Iranian bread wheat (Triticum aestivum L.) cultivars.

    abstract::Proline and glutamine-rich wheat seed endosperm proteins are collectively referred to as prolamins. They are comprised of HMW-GSs, LMW-GSs and gliadins. HMW-GSs are major determinants of gluten elasticity and LMW-GSs considerably affect dough extensibility and maximum dough resistance. The inheritance of glutenin subu...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-010-0025-y

    authors: Izadi-Darbandi A,Yazdi-Samadi B,Shanejat-Boushehri AA,Mohammadi M

    更新日期:2010-08-01 00:00:00

  • Genetics of ulcerative colitis: putting into perspective the incremental gains from Indian studies.

    abstract::Ulcerative colitis (UC), one of the two clinical subtypes of inflammatory bowel disease is perceived as a potential 'sleeping giant' in the Indian subcontinent. Clinical manifestation is overall believed to be the same across ethnic groups but overwhelming genetics from large European and fewer non-European studies ha...

    journal_title:Journal of genetics

    pub_type: 杂志文章,评审

    doi:

    authors: Juyal G,Sood A,Midha V,Thelma BK

    更新日期:2018-12-01 00:00:00

  • Identification of QTLs in oil palm (Elaeis guineensis Jacq.) using SSR markers through association mapping.

    abstract::Oil palm (Elaeis guineensis Jacq.) is a perennial vegetable and a high oil-yielding crop (4-6 t/ha). There is a large scope for increasing the oil yield by selecting elite planting material for breeding programme in germplasm evaluation, characterization and utilization. In the present study, a diverse range of 150 oi...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Bhagya HP,Kalyana Babu B,Gangadharappa PM,Naika MBN,Satish D,Mathur RK

    更新日期:2020-01-01 00:00:00

  • Study of the association of forkhead box P3 (FOXP3) gene polymorphisms with unexplained recurrent spontaneous abortions in Indian population.

    abstract::Recurrent spontaneous abortions (RSA) is defined as three or more consecutive pregnancy losses before 20 weeks of gestation. Various causes of RSA have been identified, still 50% cases remain unexplained after evaluation. One of the causes of unexplained recurrent spontaneous abortions (URSA) is supposed to be the dis...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Mishra S,Srivastava A,Mandal K,Phadke SR

    更新日期:2018-06-01 00:00:00

  • Advances in the discovery of genetic risk factors for complex forms of neurodegenerative disorders: contemporary approaches, success, challenges and prospects.

    abstract::Neurodegenerative diseases constitute a large proportion of disorders in elderly, majority being sporadic in occurrence with ∼5-10% familial. A strong genetic component underlies the Mendelian forms but nongenetic factors together with genetic vulnerability contributes to the complex sporadic forms. Several gene disco...

    journal_title:Journal of genetics

    pub_type: 杂志文章,评审

    doi:

    authors: Kumar S,Yadav N,Pandey S,Thelma BK

    更新日期:2018-07-01 00:00:00

  • Phenotypic effects of genetic variability in human clock genes on circadian and sleep parameters.

    abstract::Circadian rhythms and sleep are two separate but intimately related processes. Circadian rhythms are generated through the precisely controlled, cyclic expression of a number of genes designated clock genes. Genetic variability in these genes has been associated with a number of phenotypic differences in circadian as ...

    journal_title:Journal of genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s12041-008-0074-7

    authors: von Schantz M

    更新日期:2008-12-01 00:00:00

  • Identification of a human ABCC10 orthologue in Catharanthus roseus reveals a U12-type intron determinant for the N-terminal domain feature.

    abstract::ABC (ATP-binding cassette) transporters are members of a large superfamily of proteins that utilize ATP hydrolysis to translocate a wide range of substrates across biological membranes. In general, members of C subfamily (ABCC) are structurally characterized by an additional (N-terminal) transmembrane domain (TMD0). P...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-014-0327-6

    authors: El-Guizani T,Guibert C,Triki S,St-Pierre B,Ducos E

    更新日期:2014-04-01 00:00:00

  • Whitefly and aphid inducible promoters of Arabidopsis thaliana L.

    abstract::Lack of regulated expression and tissue specificity are the major drawbacks of plant and virus-derived constitutive promoters. A precise tissue or site-specific expression, facilitate regulated expression of proteins at the targeted time and site. Publically available microarray data on whitefly and aphid infested Ara...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Dubey NK,Mishra DK,Idris A,Nigam D,Singh PK,Sawant SV

    更新日期:2018-03-01 00:00:00

  • Axial distortion as a sensor of supercoil changes: a molecular model for the homeostatic regulation of DNA gyrase.

    abstract::Negative supercoiling stimulates transcription of many genes. In contrast, transcription of the genes coding for DNA gyrase is subject to a novel mechanism of autoregulation, wherein relaxation of the template DNA stimulates their transcription. Since DNA gyrase is the sole supercoiling activity in the eubacterial cel...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/BF02717907

    authors: Unniraman S,Nagaraja V

    更新日期:2001-12-01 00:00:00

  • Characterizing miRNA and mse-tsRNA in fertile and subfertile yak bull spermatozoa from Arunachal Pradesh.

    abstract::Male fertility in farm animals is considered as an important economic trait. The phenomenon of spermatogenesis plays a dynamic functional role in determining the viability of sperm and thereby can impact on fertility-driven complications. The process of spermatogenesis is controlled by numerous molecular factors and r...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Pratim Das P,Sultana Begum S,Choudhury M,Medhi D,Paul V,Jyoti Das P

    更新日期:2020-01-01 00:00:00

  • Ellis-van Creveld syndrome and profound deafness resulted by sequence variants in the EVC/EVC2 and TMC1 genes.

    abstract::Ellis-van Creveld syndrome is an autosomal recessive skeletal dysplasia primarily characterized by the features such as disproportionate dwarfism, short ribs, short limbs, dysplastic nails, cardiovascular malformations, post-axial polydactyly (PAP) (bilateral) of hands and feet. EVC/EVC2 located in head-to-head arrang...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-017-0868-6

    authors: Umair M,Seidel H,Ahmed I,Ullah A,Haack TB,Alhaddad B,Jan A,Rafique A,Strom TM,Ahmad F,Meitinger T,Ahmad W

    更新日期:2017-12-01 00:00:00

  • Narrow gene pool can threaten the survival of Calamus nagbettai R. R. Fernald & Dey: a highly, endemic dioecious rattan species in the Western Ghats of India.

    abstract::Rattans, the spiny climbing palms of Arecaceae (Palmae) family exhibit high endemism to the biodiversity hot spots in India. Of the five rattan genera, Calamus is the only genus found in peninsular India with 15 of 21 species, endemic to the Western Ghats. The extensive utilization of rattans owing to their strength, ...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Dev SA,Balakrishnan S,Kurian A,Sreekumar VB

    更新日期:2019-11-01 00:00:00

  • Physicochemical evolution and positive selection of the gymnosperm matK proteins.

    abstract::It is not clear whether matK evolves under Darwinian selection. In this study, the gymnosperm Taxaceae, Cephalotaxaceae and Pinaceae were used to illustrate the physicochemical evolution, molecular adaptation and evolutionary dynamics of gene divergence in matKs. matK sequences were amplified from 27 Taxaceae and 12 C...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-010-0014-1

    authors: Hao da C,Mu J,Chen SL,Xiao PG

    更新日期:2010-04-01 00:00:00

  • Mitogenome analysis of dwarf pufferfish (Carinotetraodon travancoricus) endemic to southwest India and its implications in the phylogeny of Tetraodontidae.

    abstract::The Tetraodontidae (pufferfishes), is primarily a family of marine and estuarine fishes with a limited number of freshwater species. Freshwater invasions can be observed in South America, Southeast Asia and central Africa. In the present study, we have analysed the complete mitogenome of freshwater pufferfish, Carinot...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Sathyajith C,Yamanoue Y,Yokobori SI,Thampy S,Vattiringal Jayadradhan RK

    更新日期:2019-12-01 00:00:00

  • Detection of QTL for panicle architecture in F2 population of rice.

    abstract::Panicle traits are the most important agronomic characters which directly relate to yield in rice. Panicle length (PL) being one of the major components of rice panicle structure is controlled by quantitative trait loci (QTLs). In our research, conducted at Research Farm of SKUAST-J, crosses of parental lines K343 and...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Bhat R,Singh AK,Salgotra RK,Sharma M,Mushtaq M,Bagati S,Hangloo S,Singh A

    更新日期:2019-06-01 00:00:00

  • Identification of genes involved in cold-shock response in rainbow trout (Oncorhynchus mykiss).

    abstract::A rapid decline in temperature poses a major challenge for poikilothermic fish, as their entire metabolism depends on ambient temperature. The gene expression of rainbow trout Oncorhynchus mykiss having undergone such a cold shock (0◦C) was compared to a control (5◦C) in a microarray and quantitative real-time PCR bas...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-017-0811-x

    authors: Borchel A,Verleih M,Rebl A,Goldammer T

    更新日期:2017-09-01 00:00:00

  • MiR-27b promotes sheep skeletal muscle satellite cell proliferation by targeting myostatin gene.

    abstract::To investigate the role of miR-27b in sheep skeletal muscle development, here we first cloned the sequence of sheep pre-miR-27b, then further investigated its expression pattern in sheep skeletal muscle in vivo, the relationship of miR-27b expression and sheep skeletal muscle satellite cell proliferation and different...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Zhang W,Wang SY,Deng SY,Gao L,Yang LW,Liu XN,Shi GQ

    更新日期:2018-12-01 00:00:00

  • Association between genetic polymorphisms of long noncoding RNA H19 and cancer risk: a meta-analysis.

    abstract::Long noncoding RNA (lncRNA) H19, a well-known oncogenic lncRNA, is overexpressed in various cancers. Several studies have investigated the association between polymorphisms in lncRNA H19 and the risk of various cancer types; however, the findings were inconsistent. In this study, we performed a meta-analysis to identi...

    journal_title:Journal of genetics

    pub_type: 杂志文章,meta分析,评审

    doi:

    authors: Hashemi M,Moazeni-Roodi A,Sarabandi S,Karami S,Ghavami S

    更新日期:2019-09-01 00:00:00

  • Eucalyptus microsatellites mined in silico: survey and evaluation.

    abstract::Eucalyptus is an important short rotation pulpy woody plant, grown widely in the tropics. Recently, many genomic programmes are underway leading to the accumulation of voluminous genomic and expressed sequence tag sequences in public databases. These sequences can be utilized for analysis of simple sequence repeats (S...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-008-0003-9

    authors: Yasodha R,Sumathi R,Chezhian P,Kavitha S,Ghosh M

    更新日期:2008-04-01 00:00:00

  • Association of a common rs9939609 variant in the fat mass and obesity-associated (FTO) gene with obesity and metabolic phenotypes in a Taiwanese population: a replication study.

    abstract::It is a key challenge to conduct reproducibility in genetic research, especially association studies in obesity. While susceptibility of a single-nucleotide polymorphism (SNP), rs9939609, in the fat mass and obesity-associated (FTO) gene to obesity has been reported in various populations, data from Asians is less con...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-016-0671-9

    authors: Hsiao TJ,Lin E

    更新日期:2016-09-01 00:00:00

  • Multidimensional analysis of Drosophila wing variation in Evolution Canyon.

    abstract::Environmental stress has been suggested to be a major evolutionary force, both through inducing strong selection and because of its direct impact on developmental buffering processes that alter the evolvability of organisms. In particular, temperature has attracted much attention because of its importance as an ecolog...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-008-0063-x

    authors: Debat V,Cornette R,Korol AB,Nevo E,Soulet D,David JR

    更新日期:2008-12-01 00:00:00

  • Genetic diversity studies of Kherigarh cattle based on microsatellite markers.

    abstract::We report a genetic diversity study of Kherigarh cattle, a utility draught-purpose breed of India, currently declining at a startling rate, by use of microsatellite markers recommended by the Food and Agriculture Organization. Microsatellite genotypes were derived, and allelic and genotypic frequencies, heterozygositi...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/BF02729017

    authors: Pandey AK,Sharma R,Singh Y,Prakash BB,Ahlawat SP

    更新日期:2006-08-01 00:00:00

  • Mediators of ocular angiogenesis.

    abstract::Angiogenesis is the formation of new blood vessels from pre-existing vasculature. Pathologic angiogenesis in the eye can lead to severe visual impairment. In our review, we discuss the roles of both pro-angiogenic and anti-angiogenic molecular players in corneal angiogenesis, proliferative diabetic retinopathy, exudat...

    journal_title:Journal of genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s12041-009-0068-0

    authors: Qazi Y,Maddula S,Ambati BK

    更新日期:2009-12-01 00:00:00

  • Matrix metalloproteinase gene polymorphisms in chronic periodontitis: a case-control study in the Indian population.

    abstract::Chronic periodontitis (CP) is the common form of inflammatory oral disease. Matrix metalloproteinases (MMPs) play a pivotal role in the progression of CP by degrading gingival tissue and its remodelling. Here, we conducted a case-control study to investigate a possible association of single-nucleotide polymorphism of ...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Majumder P,Ghosh S,Dey SK

    更新日期:2019-03-01 00:00:00

  • Genomewide association study for economic traits in the large yellow croaker with different numbers of extreme phenotypes.

    abstract::A traditional genomewide association study (GWAS) detects genotype-phenotype associations by the vast number of genotyped individuals. This method requires large-scale samples and considerable sequencing costs. Extreme phenotypic sampling proposes make GWAS more cost-efficient and are applied more widely. With extreme...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Wan L,Dong L,Xiao S,Han Z,Wang X,Wang Z

    更新日期:2018-09-01 00:00:00

  • Genetics of fruit yield and its component traits under different fruiting habit backgrounds in chilli (Capsicum annuum L.).

    abstract::The six basic generations (two parents, F1, F2 and backcrosses) of 14 crosses developed from nine parents differing in fruits node-1 and fruit orientation were evaluated to decipher the genetics of three quantitative traits (average fruit weight, fruits plant-1 and green fruit yield plant-1) during the rainly season o...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Anilkumar C,Mohan Rao A,Ramesh S,Bhavani B,Pranesh

    更新日期:2019-09-01 00:00:00

  • CDKN2A and MC1R variants found in Cypriot patients diagnosed with cutaneous melanoma.

    abstract::The prevalence of genetic variants associated to cutaneous melanoma (CM) has never been determined within Cypriot melanomas. This study evaluates the frequency of variants in cyclin-dependent kinase inhibitor 2A (CDKN2A) and melanocortin-1 receptor (MC1R) in 32 patients diagnosed with CM. Other characteristics and ris...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-017-0742-6

    authors: Koulermou G,Shammas C,Vassiliou A,Kyriakides TC,Costi C,Neocleous V,Phylactou LA,Pantelidou M

    更新日期:2017-03-01 00:00:00

  • Accelerated molecular evolution of insect orthologues of ERG28/C14orf1: a link with ecdysteroid metabolism?

    abstract::We have analysed the evolution of ERG28/C14orf1, a gene coding for a protein involved in sterol biosynthesis. While primary sequence of the protein is well conserved in all organisms able to synthesize sterols de novo, strong divergence is noticed in insects, which are cholesterol auxotrophs. In spite of this virtual ...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/BF02811414

    authors: Veitia RA,Hurst LD

    更新日期:2001-04-01 00:00:00

  • J. B. S. Haldane and the origin of life.

    abstract::In 1929 the British biologist John Burdon Sanderson Haldane published a hypothesis on the origin of life on earth, which was one of the most emblematic of the interwar period. It was a scenario describing the progressive evolution of matter on the primitive earth and the emergence of life. Firstly, this paper presents...

    journal_title:Journal of genetics

    pub_type: 传,历史文章,杂志文章

    doi:10.1007/s12041-017-0831-6

    authors: Tirard S

    更新日期:2017-11-01 00:00:00