Phylogenetic tracking of current porcine epidemic diarrhea virus (PEDV) strains in the Philippines.

Abstract:

:To trace the possible route of introduction of porcine epidemic diarrhea virus (PEDV), the phylogenetic relationships of PEDV strains in the regions of epidemicity in the Philippines to PEDV strains that are endemic in other countries were investigated. Partial nucleotide sequences of the S1 spike gene was determined from the PEDV-positive samples and compared with S1 sequences from other countries. Phylogenetic analysis indicated that PEDV strains in the Philippines segregate into two groups. Members of group 1 are related to strains from the USA, Taiwan, Japan and Canada, while those in group 2 are related to strains from China and Vietnam.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Paraguison-Alili R,Domingo CY

doi

10.1007/s00705-016-2938-0

subject

Has Abstract

pub_date

2016-09-01 00:00:00

pages

2601-4

issue

9

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-016-2938-0

journal_volume

161

pub_type

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