Abstract:
:The fungal microbiota is an important component of the human gut microbiome and may be linked to gastrointestinal disease. In this study, the fungal microbiota of biopsy samples from adenomas and adjacent tissues was characterized by deep sequencing. Ascomycota, Glomeromycota and Basidiomycota were identified as the dominant phyla in both adenomas and adjacent tissues from all subjects. Among the 60 genera identified, the opportunist pathogens Phoma and Candida represented an average of 45% of the fungal microbiota. When analyzed at the operational taxonomic unit (OTU) level, however, a decreased diversity in adenomas was observed, and three OTUs differed significantly from the adjacent tissues. Principal Component Analysis (PCA) revealed that the core OTUs formed separate clusters for advanced and non-advanced adenomas for which the abundance of four OTUs differed significantly. Moreover, the size of adenomas and the disease stage were closely related to changes in the fungal microbiota in subjects with adenomas. This study characterized the fungal microbiota profile of subjects with adenomas and identified potential diagnostic biomarkers closely related to different stages of adenomas.
journal_name
Sci Repjournal_title
Scientific reportsauthors
Luan C,Xie L,Yang X,Miao H,Lv N,Zhang R,Xiao X,Hu Y,Liu Y,Wu N,Zhu Y,Zhu Bdoi
10.1038/srep07980subject
Has Abstractpub_date
2015-01-23 00:00:00pages
7980issn
2045-2322pii
srep07980journal_volume
5pub_type
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