Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture.

Abstract:

:Phenotypic plasticity is presumed to be involved in adaptive change toward species diversification. We thus examined how candidate genes underlying natural variation across populations might also mediate plasticity within an individual. Our implementation of an integrative "plasticity space" approach revealed that the root plasticity of a single Arabidopsis accession exposed to distinct environments broadly recapitulates the natural variation "space." Genome-wide association mapping identified the known gene PHOSPHATE 1 (PHO1) and other genes such as Root System Architecture 1 (RSA1) associated with differences in root allometry, a highly plastic trait capturing the distribution of lateral roots along the primary axis. The response of mutants in the Columbia-0 background suggests their involvement in signaling key modulators of root development including auxin, abscisic acid, and nitrate. Moreover, genotype-by-environment interactions for the PHO1 and RSA1 genes in Columbia-0 phenocopy the root allometry of other natural variants. This finding supports a role for plasticity responses in phenotypic evolution in natural environments.

authors

Rosas U,Cibrian-Jaramillo A,Ristova D,Banta JA,Gifford ML,Fan AH,Zhou RW,Kim GJ,Krouk G,Birnbaum KD,Purugganan MD,Coruzzi GM

doi

10.1073/pnas.1305883110

subject

Has Abstract

pub_date

2013-09-10 00:00:00

pages

15133-8

issue

37

eissn

0027-8424

issn

1091-6490

pii

1305883110

journal_volume

110

pub_type

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