Sphingobium czechense sp. nov., isolated from a hexachlorocyclohexane dump site.

abstract：:Descriptions of the genus Caecibacterium and its proposed type species Caecibacterium sporoformans were published in the IJSEM by Onrust et al. (Int J Syst Evol Microbiol 2017;67:4589-4594). The type strain was deposited as LMG 27730 and DSM 26959. DSM 26959 is a patent strain, and therefore the names were effectively...

journal_title：International journal of systematic and evolutionary microbiology

authors： Oren A,Garrity GM,Spring S,Onrust L,Petzoldt D,Eeckhaut V,De Maesschalck C,Haesebrouck F,Rautenschlein S,Ducatelle R,Van Immerseel F,Taras D

更新日期：2019-02-01 00:00:00

abstract：:Three short spore chain-forming actinomycete strains were isolated from soil samples collected from subtropical islands in Japan. The cell-wall peptidoglycan of these strains contained meso-diaminopimelic acid (meso-A(2)pm), glutamic acid and alanine. The major isoprenoid quinone was MK-9(H(4)), iso-C(16 : 0) and 2-OH...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tamura T,Ishida Y,Otoguro M,Suzuki KI

更新日期：2010-11-01 00:00:00

abstract：:A Gram-negative, strictly aerobic, gliding motility, none-spore forming, yellow, rods bacterial strain, designated XS-5T, was isolated from rhizosphere soil of Suaeda salsa, in Tumd Right Banner, Inner Mongolia, PR China. A phylogenetic tree based on the 16S rRNA gene sequences and the phylogenomic tree both showed th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Xu L,Wang HT,Zhang JX,Zhang H,Wang S,Sun JQ

更新日期：2020-06-01 00:00:00

abstract：:The taxonomic status of a pale-yellow-coloured bacterial isolate from rhizosphere soil of Fortunella hindsii (Champ. ex Benth.) Swingle was characterized using a polyphasic taxonomic approach. Comparative analysis of the 16S rRNA gene sequence showed that the isolate constituted a distinct branch within the genus Sphi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Young CC,Arun AB,Kämpfer P,Busse HJ,Lai WA,Chen WM,Shen FT,Rekha PD

更新日期：2008-08-01 00:00:00

abstract：:Two strains of an asexual cellobiose-fermenting yeast species were isolated from rotten wood samples collected in Funiu Mountain Nature Reserve in Henan Province, central China. Molecular phylogenetic analysis that included the nearly complete small subunit (SSU), the internal transcribed spacer (ITS) region and the D...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang Y,Ren YC,Zhang ZT,Wu FH,Ke T,Hui FL

更新日期：2015-06-01 00:00:00

abstract：:A Gram-negative, motile and oval- or rod-shaped bacterial strain, DS-43T, was isolated from soil from Dokdo, Korea, and its taxonomic position was investigated by using a polyphasic approach. The strain grew optimally at pH 7.0-8.0 and at 30 degrees C in the presence of 0.5 % (w/v) NaCl. Strain DS-43T had Q-8 as the p...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Kang SJ,Oh TK

更新日期：2006-04-01 00:00:00

abstract：:A Gram-stain-negative, aerobic bacterium, designated strain GYP-11T, was isolated from the culture broth of a marine microalga, Picochloruma sp. 122. Cells were dimorphic rods; free living cells were motile by means of a single polar flagellum, and star-shaped-aggregate-forming cells were attached with stalks and non-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang G,Tang M,Wu H,Dai S,Li T,Chen C,He H,Fan J,Xiang W,Li X

更新日期：2016-01-01 00:00:00

abstract：:Three thermo-tolerant halophilic archaeal strains, SR-441T, SR-412 and SR-188, were isolated from commercial salt samples. Cells were non-motile pleomorphic rod-shaped, and stained Gram-negative. Colonies were pink-pigmented. The three strains were able to grow with 1.7-4.6 M NaCl (optimum, 2.5 M), at pH 6.5-9.0 (opti...

journal_title：International journal of systematic and evolutionary microbiology

authors： Minegishi H,Shimogaki R,Enomoto S,Echigo A,Kondo Y,Nagaoka S,Shimane Y,Kamekura M,Itoh T,Ohkuma M,Nunoura T,Takai K,Usami R

更新日期：2016-12-01 00:00:00

abstract：:A Gram-staining-negative, strictly aerobic bacterial strain, designated MA7-20T, was isolated from a marine alga, Porphyridium marinum, in Korea. Cells showing oxidase-positive and catalase-positive activities were motile rods with bipolar flagella. Growth of strain MA7-20T was observed at 15-45 °C (optimum, 30-37 °C)...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hyeon JW,Jeong SE,Baek K,Jeon CO

更新日期：2017-02-01 00:00:00

abstract：:A strictly aerobic, thermophilic, gram-positive, spore-producing, rod-shaped bacterium (2.0-10.0 x 0.3 microm), designated isolate C21T, was isolated from a sample collected from an open drain run-off channel of a bore in the Great Artesian Basin of Australia (New Lorne Bore, registered number 17263). Isolate C21T gre...

journal_title：International journal of systematic and evolutionary microbiology

authors： Spanevello MD,Yamamoto H,Patel BKC

更新日期：2002-05-01 00:00:00

abstract：:Various bacterial species in the genus Pasteuria have great potential as biocontrol agents against plant-parasitic nematodes, although study of this important genus is hampered by the current inability to cultivate Pasteuria species outside their host. To aid in the study of this genus, an extensive 16S rRNA gene sequ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Duan YP,Castro HF,Hewlett TE,White JH,Ogram AV

更新日期：2003-01-01 00:00:00

abstract：:Strain Eg1(T), an anaerobic, Gram-stain-positive, non-motile and non-spore-forming bacterium, was isolated from human faeces. The optimal temperature for growth was 37 °C and tests for oxidase and catalase activities gave negative results. Fructose-6-phosphate phosphoketolase activity was detected. Acid was pro...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim MS,Roh SW,Bae JW

更新日期：2010-12-01 00:00:00

abstract：:Lactobacillus versmoldensis sp. nov. (KU-3T) was isolated from raw fermented sausages. The new species was present in high numbers, and frequently dominated the lactic acid bacteria (LAB) populations of the products. 16S rDNA sequence data revealed that the isolates are closely related to the species Lactobacillus kim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kröckel L,Schillinger U,Franz CMAP,Bantleon A,Ludwig W

更新日期：2003-03-01 00:00:00

abstract：:Advances in DNA sequencing and the increasing number of sequences available in databases have greatly enhanced the bacterial identification process. Several species within the genus Mycobacterium cause serious human and animal diseases. In order to assess their relative positions in the evolutionary process, four gene...

journal_title：International journal of systematic and evolutionary microbiology

authors： Devulder G,de Montclos MP,Flandrois JP

更新日期：2005-01-01 00:00:00

abstract：:A Gram-positive, aerobic, non-motile, non-endospore-forming rod-shaped bacterium with ibuprofen-degrading capacity, designated strain I11(T), was isolated from activated sludge from a wastewater treatment plant. The major respiratory quinone was demethylmenaquinone DMK-7, C18 : 1 cis9 was the predominant fatty acid, p...

journal_title：International journal of systematic and evolutionary microbiology

authors： Almeida B,Vaz-Moreira I,Schumann P,Nunes OC,Carvalho G,Crespo MTB

更新日期：2013-07-01 00:00:00

abstract：:Two strains of agar-digesting bacteria, KMM 3299T and KMM 3300, respectively isolated from sea water and the mussel Protothaca jedoensis, have been characterized. Based on sequencing of the 16S rRNA gene, KMM 3299T showed the highest similarity (93-95%) to members of the genus Shewanella. The G+C contents of the DNAs ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ivanova EP,Sawabe T,Gorshkova NM,Svetashev VI,Mikhailov VV,Nicolau DV,Christen R

更新日期：2001-05-01 00:00:00

abstract：:A novel marine Gram-negative, non-motile, non-spore-forming, aerobic bacterium, associated with the bryozoan Bugula plumosa, was isolated in a screening programme for strains containing enzymes able to convert the amino acid L-serine. Strain MBT-A4T produced L-serine dehydratase and was able to grow on L-serine as the...

journal_title：International journal of systematic and evolutionary microbiology

authors： Pukall R,Laroche M,Kroppenstedt RM,Schumann P,Stackebrandt E,Ulber R

更新日期：2003-03-01 00:00:00

abstract：:An unknown gram-positive, catalase-positive, strictly aerobic, rod-shaped bacterium was isolated from the nasal cavities of two common seals. Chemical analysis revealed the presence in the bacterium of a hitherto unknown cell-wall murein [type: L-Lys-L-Ala2-Gly(2-3)-L-Ala (Gly)]. Comparative 16S rRNA gene sequencing s...

journal_title：International journal of systematic and evolutionary microbiology

authors： Collins MD,Hoyles L,Foster G,Falsen E,Weiss N

更新日期：2002-03-01 00:00:00

abstract：:A Gram-stain-positive, obligately anaerobic, short rod, designated strain HHRM1715(T), was isolated from the blood of a patient with Fournier's gangrene, complicated by sepsis. On the basis of 16S rRNA gene sequence analysis, strain HHRM1715(T) was shown to belong to the genus Atopobium and was most closely related to...

journal_title：International journal of systematic and evolutionary microbiology

authors： Cools P,Oyaert M,Vaneechoutte M,De Laere E,Vervaeke S

更新日期：2014-09-01 00:00:00

abstract：:A facultatively anaerobic, alkaliphilic, spore-forming, Gram-positive-staining rod, designated Y1(T), was isolated under strictly anaerobic conditions from sediment of a soda lake in Jilin province, China. The strain was not dependent on Na(+) but was highly halotolerant and grew optimally in medium JY with 0.5 M Na(+...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wu XY,Zheng G,Zhang WW,Xu XW,Wu M,Zhu XF

更新日期：2010-11-01 00:00:00

abstract：:The taxonomic status of a bacterium, strain DC-8(T), isolated from activated sludge, was determined using a polyphasic taxonomic approach. The cells of strain DC-8(T) were Gram-negative, non-motile, non-spore-forming and rod-shaped. The isolate grew at temperature range of 10-40 °C (optimum 30-35 °C), pH range of 5.0-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sun LN,Zhang J,Chen Q,He J,Li SP

更新日期：2013-06-01 00:00:00

abstract：:An aerobic, spore-forming, actinomycete, designated strain CHM3-46T, was isolated from soil in a hot spring pond located in Chiangmai province, Thailand. The strain exhibited taxonomic characteristics consistent with the genus Thermocatellispora. Strain CHM3-46T produced short, straight chains of warty spores on aeria...

journal_title：International journal of systematic and evolutionary microbiology

authors： Duangupama T,Pittayakhajonwut P,Thawai C

更新日期：2019-01-01 00:00:00

abstract：:Four strains of aerobic, Gram-negative rods, motile by means of a single polar flagellum, that produced phenolic anti-methicillin-resistant Staphylococcus aureus (MRSA) substances and brown-pigmented colonies, were isolated from sea water. The G + C content of the DNA ranged from 39.9 to 40.6 mol%. The isolates grew a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Isnansetyo A,Kamei Y

更新日期：2003-03-01 00:00:00

abstract：:A Gram-stain-negative, aerobic, motile, rod-shaped or ovoid bacterial strain, designated DB-2T, was isolated from a tidal flat of the Yellow Sea in South Korea, and subjected to a taxonomic study using a polyphasic approach. Strain DB-2T grew optimally at 30 °C, at pH 7.0-8.0 and in the presence of 2.0-3.0 % (w/v) NaC...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park S,Jung YT,Park DS,Yoon JH

更新日期：2016-05-01 00:00:00

abstract：:Two Gram-stain-negative, catalase- and oxidase-positive, facultative anaerobic and rod-shaped motile bacteria, designated strains BEI176T and BEI207T, were isolated from seawater collected in the East China Sea. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains BEI176T and BEI207T belonged to ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li B,Li Y,Liu R,Xue C,Zhu X,Tian X,Wang X,Liang J,Zheng Y,Zhang XH

更新日期：2020-01-01 00:00:00

abstract：:Three strains of lactic acid bacteria (LAB) were isolated from the faeces of apparently healthy wild Canada geese (Branta canadensis) in 2010 by cultivating faecal LAB on Rogosa SL agar under aerobic conditions. These three isolates were found to share 99.9 % gene sequence similarity of their 16S rRNA, their 16S-23S i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Volokhov DV,Amselle M,Beck BJ,Popham DL,Whittaker P,Wang H,Kerrigan E,Chizhikov VE

更新日期：2012-09-01 00:00:00

abstract：:A coccoid actinobacterium strain (designated YIM 70178(T)) was isolated from a soil sample collected in Qinghai Province, China. The isolate grew well with an optimum salt concentration of 10-15% (KCl, w/v) but scarcely or not at all without salt. The cell-wall peptidoglycan type was A4alpha, L-Lys-gly-L-Glu. The majo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li WJ,Schumann P,Zhang YQ,Xu P,Chen GZ,Xu LH,Stackebrandt E,Jiang CL

更新日期：2005-09-01 00:00:00

abstract：:A Gram-stain-positive, non-endospore-forming actinobacterium (CC-12301(T)) was isolated from soil attached to a spawn used in the laboratory to grow the edible mushroom Agaricus brasiliensis. Based on 16S rRNA gene sequence similarities, strain CC-12301(T) was shown to belong to the genus Gordonia and was most closely...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kämpfer P,Young CC,Chu JN,Frischmann A,Busse HJ,Arun AB,Shen FT,Rekha PD

更新日期：2011-01-01 00:00:00

abstract：:Two groups of haloalkaliphilic methanogenic archaea were dominating in enrichments from hypersaline soda lake sediments at pH 10. At moderate salt concentrations with formate or H2 as electron donor, methanogens belonging to the genus Methanocalculus were enriched, while at high salt concentrations with methylated sub...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sorokin DY,Abbas B,Merkel AY,Rijpstra WIC,Damsté JSS,Sukhacheva MV,van Loosdrecht MCM

更新日期：2015-10-01 00:00:00

abstract：:Five bacterial isolates were recovered from dermatitis or organ lesions of five agamid lizards. Three strains were recovered from Uromastyx species with dermatitis or septicaemia. All five isolates were Gram-positive small rods that could not be identified using conventional phenotypic systems. They grew on sheep bloo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Martel A,Pasmans F,Hellebuyck T,Haesebrouck F,Vandamme P

更新日期：2008-09-01 00:00:00