Terena Amerindian group autosomal STR data: comparison studies with other Brazilian populations.

Abstract:

:Allele frequencies for the high polymorphic short tandem repeats (STR) loci PentaE, PentaD, D18S51, D21S11, TH01, D3S1358, FGA, D16S539, D7820, D13S317, vWA and D81179 were analysed in an native Amerindian population from Mato Grosso do Sul state named Terena. Deviations from Hardy-Weinberg expectations were evaluated and the results showed no differences from equilibrium in all loci. The combined power of discrimination and the combined power of exclusion for the 12 tested STR loci were 0.99999999 and 0.999999 respectively. The Terena population data were compared to other from 11 Brazilian populations (Amazônia, Pernambuco, Mato Grosso do Sul, São Paulo, Rio Grande do Sul, Alagoas, Sergipe, Rio Grande do Norte, Santa Catarina, Rondônia and Rio de Janeiro) representing the major Brazilian geographic regions. The F(ST) comparative analysis showed no significant differences between all those populations except when comparing Terena with the remained ones.

journal_name

Mol Biol Rep

authors

Manta FS,Silva DA,Sánchez-Diz P,Aguiar JI,Cabello PH,Carvalho EF

doi

10.1007/s11033-011-1234-z

subject

Has Abstract

pub_date

2012-04-01 00:00:00

pages

4455-9

issue

4

eissn

0301-4851

issn

1573-4978

journal_volume

39

pub_type

杂志文章
  • Expressed sequence tags-based identification of genes in a biocontrol strain Trichoderma asperellum.

    abstract::Trichoderma asperellum, a filamentous soil fungus, is an effective biocontrol agent against many fungal plant pathogenic species. In the present study, we investigated the biological control properties of the strain T. asperellum T4. T. asperellum fermentation products significantly decreased the ability of Rhizoctoni...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0019-0

    authors: Liu Z,Yang X,Sun D,Song J,Chen G,Juba O,Yang Q

    更新日期:2010-12-01 00:00:00

  • Genetic diversity analysis for narrow-leafed lupin (Lupinus angustifolius L.) by SSR markers.

    abstract::Narrow-leafed lupin (Lupinus angustifolius L.) is used as grain legumes, fodder for livestock and green manure in the world and has a great potential to be developed as a new crop in China. In this study, we assessed the genetic diversity among a set of 109 newly introduced accessions of narrow-leafed lupin using 76 g...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-05596-z

    authors: Ji Y,Liu R,Hu J,Huang Y,Wang D,Li G,Rahman MM,Zhang H,Wang C,Li M,Yang T,Zong X

    更新日期:2020-07-01 00:00:00

  • Induction of macroautophagy by heat.

    abstract::Macroautophagy is a regulated bulk degradation process of cellular components, mainly long-lived proteins or cytoplasmic organelles. Nutrient depletion is a classic inducer of macroautophagy. In this report, we have induced heat-mediated macroautophagy in several cell lines in the absence of nutrient depletion. Heat t...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9451-4

    authors: Zhao Y,Gong S,Shunmei E,Zou J

    更新日期:2009-11-01 00:00:00

  • Selection of reference genes for quantitative real time RT-PCR during dimorphism in the zygomycete Mucor circinelloides.

    abstract::Mucor circinelloides is a dimorphic fungal model for studying several biological processes including cell differentiation (yeast-mold transitions) as well as biodiesel and carotene production. The recent release of the first draft sequence of the M. circinelloides genome, combined with the availability of analytical m...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3818-x

    authors: Valle-Maldonado MI,Jácome-Galarza IE,Gutiérrez-Corona F,Ramírez-Díaz MI,Campos-García J,Meza-Carmen V

    更新日期:2015-03-01 00:00:00

  • Perspectives on zinc finger protein function and evolution--an update.

    abstract::Complexity is one of the hallmarks that applies to C2H2 type zinc finger proteins (ZFPs). Structurally distinct clusters of zinc finger modules define an extremely large superfamily of nucleic acid binding proteins with several hundred, perhaps thousands of different members in vertebrates. Recent discoveries have pro...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/BF00999848

    authors: Pieler T,Bellefroid E

    更新日期:1994-07-01 00:00:00

  • N-(1-Pyrenyl) maleimide inhibits telomerase activity in a cell free system and induces apoptosis in Jurkat cells.

    abstract::Telomerase activity is repressed in normal human somatic cells, but is activated in most cancers, suggesting that telomerase may be an important target for cancer therapy. Agents that interact selectively with telomerase are anticipated to exert specific action on cancer cells. In this study, we evaluated maleimide de...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1757-y

    authors: Huang PR,Yeh YM,Pao CC,Chen CY,Wang TC

    更新日期:2012-09-01 00:00:00

  • Imprinting analysis of porcine DIO3 gene in two fetal stages and association analysis with carcass and meat quality traits.

    abstract::Imprinted genes play important roles in mammalian growth, development and behavior. In this study, we obtained 1568 bp mRNA sequence of porcine DIO3 (deiodinase, iodothyronine, type III), and also identified its imprinting status during porcine fetal development. The complete open reading frame (ORF) encoding 278 amin...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-0983-z

    authors: Qiao M,Wu HY,Guo L,Mei SQ,Zhang PP,Li FE,Zheng R,Deng CY

    更新日期:2012-03-01 00:00:00

  • Phenylalanyl-tRNA synthetase from E. coli MRE-600: localization of the phenylalanine binding sites on the subunits by affinity reagents.

    abstract::The phenylalanine and the phenylalanyl-tRNAPhe binding sites on the subunits of phenylalanyl-tRNA synthetase from E. coli MRE-600 were localized using p-azidoanilidate of [14C]phenylalanine and N-bromoacetyl-[14C]phenylalanyl-tRNAPhe. The phenylalanine recognizing site was shown to be situated on the alpha subunit of ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00778515

    authors: Lavrik OI,Moor NA,Khodyreva SN

    更新日期:1982-03-31 00:00:00

  • Lithium facilitates removal of misfolded proteins and attenuated faulty interaction between mutant SOD1 and p-CREB (Ser133) through enhanced autophagy in mutant hSOD1G93A transfected neuronal cell lines.

    abstract::Abnormally protein aggregation and deposition are key pathological features of ALS, which may related with dysfunctional cellular autophagy. In the current study, we found that, compared with wtSOD1 cells, serum starvation treatment resulted in significant higher percentage of apoptosis in mutSOD1 cells; Lithium treat...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-05071-4

    authors: Yin X,Wang S,Wang X,Yang Y,Jiang H,Wang T,Wang Y,Zhang C,Feng H

    更新日期:2019-12-01 00:00:00

  • Diagnosis of mitochondrial disorders applying massive pyrosequencing.

    abstract::Mitochondrial disorders are a frequent cause of neurological disability affecting children and adults. Traditionally, molecular diagnosis of mitochondrial diseases was mostly accomplished by the use of Sanger sequencing and PCR-RFLP. However, there are particular drawbacks associated with the use of these methods. Rec...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1471-9

    authors: Kauffman MA,Gonzlez-Morón D,Consalvo D,Westergaard G,Vazquez M,Mancini E,Taratuto AL,Rey R,Kochen S

    更新日期:2012-06-01 00:00:00

  • A rice lipid transfer protein binds to plasma membrane proteinaceous sites.

    abstract::Nonspecific lipid transfer protein (nsLTP) is usually basic and secreted low-molecular-mass protein in plants. The 3-D structure of nsLTP1 resembles that of elicitin produced by the plant pathogen Phytophthora cryptogea, which can bind to the plant plasma membrane putative receptor and activate the downstream response...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-008-9238-z

    authors: Wang X,Wang H,Li Y,Cao K,Ge X

    更新日期:2009-04-01 00:00:00

  • Effects of diets high in corn oil or in extra virgin olive oil on oxidative stress in an experimental model of breast cancer.

    abstract::Experimental evidence highlights the importance of dietetic factors on breast cancer. In this work we aimed to analyze the effects two oils, corn oil (rich in n-6 polyunsaturated fatty acids -PUFA-) and extra virgin olive oil (EVOO), on oxidative stress in an animal model of breast carcinogenesis. Female rats were fed...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-05492-6

    authors: Escrich R,Vela E,Solanas M,Moral R

    更新日期:2020-07-01 00:00:00

  • Modulation of lactate dehydrogenase isozymes by modified base queuine.

    abstract::The modified base queuine is a nutrient factor for lower and higher eukaryotes except yeast. It is synthesized in eubacteria and inserted into the wobble position of specific tRNAs (tRNA(GUN)) in exchange of guanine at position 34. The tRNAs of Q family are completely modified in terminally differentiated somatic cell...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-004-6941-2

    authors: Pathak C,Vinayak M

    更新日期:2005-09-01 00:00:00

  • Competitive priming PCR: a versatile method to generate cohesive terminus.

    abstract::In the post-genomic era, providing a detailed description of protein functions poses a formidable challenge. To gain functional insights, we have to construct many kinds of expression vectors. DNA recombination based on polymerase chain reaction (PCR) and digestion followed by ligation is the preferred method for vect...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9527-1

    authors: Pan JS,Zhang ZP,Cai JY,Dong J,Ren JL,Wang XZ

    更新日期:2010-03-01 00:00:00

  • Tissue-specific expression of the chicken adipose differentiation-related protein (ADP) gene.

    abstract::Adipose differentiation-related protein gene (ADP) plays an important role in controlling lipid accumulation in mammals. It may also affect lipid deposition in birds. However, the molecular mechanism of its actions in birds remains unknown. In the present study, the coding sequence of ADP cDNA for Chinese native breed...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9836-4

    authors: Zhao X,Zhu Q,Wang Y,Yang Z,Liu Y

    更新日期:2010-07-01 00:00:00

  • Molecular characterization of the Salicornia brachiata SbMAPKK gene and its expression by abiotic stress.

    abstract::MAPK cascade is an important intracellular signaling module and function as a convergent point for crosstalk during abiotic stress signaling. In this study SbMAPKK gene has been isolated from Salicornia brachiata, a highly salt tolerant plant growing in costal marshes of Gujarat, India. The SbMAPKK gene is 1,023 bp lo...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9774-1

    authors: Agarwal PK,Gupta K,Jha B

    更新日期:2010-02-01 00:00:00

  • Studies on protein organization of nucleosomes using cross-linking.

    abstract::When chromosomal proteins in chromatin or in mononucleosomes were extensively cross-linked with an imido ester, the H1-containing nonameric histone complex was revealed. In this complex, histone H1 is connected with the octamer of core histones. The cross-linking of H1 of the octamer is realized preferentially through...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00805754

    authors: Bakayev VV,Bakayeva TG,Domansky NN

    更新日期:1981-08-14 00:00:00

  • Development of 19 novel microsatellite markers of lily-of-the-valley (Convallaria, Asparagaceae) from transcriptome sequencing.

    abstract::The lily-of-the-valley Convallaria (Asparagaceae) consists of three herbaceous perennial species. The plants are commonly found in northern hemisphere, and are best-known for their ornamental and pharmaceutical value. In order to assess the genetic structure, diversity and demographic history of Convallaria species, 1...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-05376-9

    authors: Lu QX,Gao J,Wu JJ,Zhou X,Wu X,Li MD,Wei YK,Wang RH,Qi ZC,Li P

    更新日期:2020-04-01 00:00:00

  • A highly sensitive immuno-PCR assay for detection of H5N1 avian influenza virus.

    abstract::With an aim at detecting the ultra-low concentration of avian influenza virus (AIV), a highly sensitive hybrid assay based on immunology and polymerase chain reaction was developed. The TopYield microtiter plates were coated with ten-fold serial dilutions of H5N1 subtype AIV ranging from 10 EID(50 )ml(-1)~10(-4) EID(5...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0315-8

    authors: Deng MJ,Xiao XZ,Zhang YM,Wu XH,Zhu LH,Xin XQ,Wu DL

    更新日期:2011-03-01 00:00:00

  • The prevalence of factor V Leiden, prothrombin G20210A and methylenetetrahydrofolate reductase polymorphism C677T among G6PD deficient individuals from Western Iran.

    abstract::It has been suggested that the allele frequency of thrombophilic mutations is affected by glucose-6-phosphate dehydrogenase (G6PD) deficiency. The prevalence of thrombophilic mutations were studied in sixty G6PD deficient individuals including 57 males and three females with the mean age of 15 +/- 3.08 and 110 age and...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9458-x

    authors: Mozafari H,Rahimi Z,Heidarpour A,Fallahi M,Muniz A

    更新日期:2009-11-01 00:00:00

  • Refined definition of the 56K and other autoantigens in the 50-60 kDa region.

    abstract::Alteration of the acrylamide:bisacrylamide ratio in the SDS-polyacrylamide gel used for Western blotting strongly improved the unambiguous detection of antibodies against 50-60 kDa autoantigens present in autoimmune patient sera. The relative migration of Ro52, the 56K autoantigen and calreticulin increased with reduc...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00419667

    authors: Pruijn GJ,Bozic B,Schoute F,Rokeach LA,van Venrooij WJ

    更新日期:1992-09-01 00:00:00

  • Mutagenesis of tyrosine residues within helix VII in subunit I of the cytochrome cbb₃ oxidase from Rhodobacter capsulatus.

    abstract::The cbb (3)-type oxidases are members of the heme-copper oxidase superfamily, distant by sequence comparisons, but sharing common functional characteristics. The cbb (3) oxidases are missing an active-site tyrosine residue that is absolutely conserved in all A and B-type heme-copper oxidases. This tyrosine is known to...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0437-z

    authors: Oztürk M,Watmough NJ

    更新日期:2011-06-01 00:00:00

  • Cross-priming of microsatellite loci in subfamily cyprininae (family Cyprinidae): their utility in finding markers for population genetic analysis in three Indian major carps.

    abstract::This study is aimed to identify polymorphic microsatellite markers and establish their potential for population genetics studies in three carp (family cyprinidae; subfamily cyprininae) species, Labeo rohita, Catla catla and Cirrhinus mrigala through use of cyprinid primers. These species have high commercial value and...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3386-0

    authors: Masih P,Luhariya RK,Das R,Gupta A,Mohindra V,Singh RK,Srivastava R,Chauhan UK,Jena JK,Lal KK

    更新日期:2014-08-01 00:00:00

  • Identification of the tree shrew ATP-binding cassette transporter A1 (ABCA1) and its expression in tissues : cDNA sequence and expression of tree shrew ABCA1.

    abstract::ATP-binding cassette transporter A1 (ABCA1) modulates plasma levels of high density lipoprotein (HDL), a cardiovascular protecting factor. Tree shrew was considered to be an animal protected from atherosclerosis characterized by high proportion of HDL in plasma. The cDNA clones and expression of tree shrew ABCA1 was i...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-007-9199-7

    authors: Zeng WW,Zhou B,Liu HR,Sun GT,Chen BS

    更新日期:2009-03-01 00:00:00

  • Fluorescent in-situ hybridization of cattle and sheep chromosomes with cloned human fragile-X DNA.

    abstract::An extensive study on spontaneous and 5-Fluorodeoxyuridine induced fragile sites identified Xq31 in cattle (Bos taurus) and (Xq24, Xq26) in sheep (Ovis aries) in addition to several autosomal fragile sites (under publication). A ZOO-FISH study using three cloned human fragile-X probes with CCG/CGG(n) trinucleotide rep...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-008-9221-8

    authors: Ali A,Thomsen PD,Babar ME

    更新日期:2009-03-01 00:00:00

  • Cloning and characterization of a novel stress-responsive WRKY transcription factor gene (MusaWRKY71) from Musa spp. cv. Karibale Monthan (ABB group) using transformed banana cells.

    abstract::WRKY transcription factor proteins play significant roles in plant stress responses. Here, we report the cloning and characterization of a novel WRKY gene, MusaWRKY71 isolated from an edible banana cultivar Musa spp. Karibale Monthan (ABB group). MusaWRKY71, initially identified using in silico approaches from an abio...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0521-4

    authors: Shekhawat UK,Ganapathi TR,Srinivas L

    更新日期:2011-08-01 00:00:00

  • MMP-2, TNF-α and NLRP1 polymorphisms in Chinese patients with ankylosing spondylitis and rheumatoid arthritis.

    abstract::Rheumatoid arthritis (RA) and ankylosing spondylitis (AS) are autoimmune, inflammatory diseases with substantial genetic contributions. Matrix metalloproteinase (MMP)-2, tumor necrosis factor (TNF)-α and NLR family pyrin domain-containing 1 (NLRP1) play important roles in the immune response. We studied the MMP-2 rs24...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2743-8

    authors: Sun R,Huang Y,Zhang H,Liu R

    更新日期:2013-11-01 00:00:00

  • The effects of simvastatin on angiogenesis: studied by an original model of atherosclerosis and acute myocardial infarction in rabbit.

    abstract::Statins have shown pleiotropic effects, many of them independent of their impact on lipids. Angiogenesis can be beneficial in the acute myocardial infarction to improve circulation. However, it also can be harmful due to worsening of atherosclerosis. Here, we established a new minimal invasive rabbit model to study is...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0497-0

    authors: Shen W,Shi HM,Fan WH,Luo XP,Jin B,Li Y

    更新日期:2011-08-01 00:00:00

  • RNases in ColE1 DNA metabolism.

    abstract::ColE1 DNA replication is initiated by RNA II and inhibited by RNA I. Control of the replication occurs through the interaction between RNA I and RNA II. Therefore, RNases involved in the metabolism of RNA I and RNA II are expected to play a key role in the control of the ColE1 plasmid replication. RNase H, RNase E, RN...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/BF00988728

    authors: Jung YH,Lee Y

    更新日期:1995-01-01 00:00:00

  • Polymorphism Val103Ile of the melanocortin-4 receptor gene in the Serbian population.

    abstract::The melanocortin-4 receptor (MC4R) plays an important role in weight and energy homeostasis and it is associated with lower risk to develop obesity and lower body mass index. The contribution of MC4R mutation to obesity in Vojvodina (Northern Province of Serbia), known as a region with the largest number of overweight...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9500-z

    authors: Stokić E,Djan M,Vapa Lj,Djan I,Plećas A,Srdić B

    更新日期:2010-01-01 00:00:00