A nonparametric view of network models and Newman-Girvan and other modularities.

abstract：:The ability of bacteria to regulate gene expression in response to changes in cell density is termed quorum sensing. This behavior involves the synthesis and recognition of extracellular, hormone-like compounds known as autoinducers. Here we report the structure of an autoinducer synthase, LuxS from Bacillus subtilis,...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hilgers MT,Ludwig ML

更新日期：2001-09-25 00:00:00

abstract：:Purified influenza viral cores catalyze the entire process of viral RNA transcription, which includes the endonucleolytic cleavage of heterologous RNAs containing cap 1 (m(7)GpppNm) structures to generate capped primers 10-13 nucleotides long, the initiation of transcription via the incorporation of a guanosine residu...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ulmanen I,Broni BA,Krug RM

更新日期：1981-12-01 00:00:00

abstract：:Preferential phosphorylation of specific proteins by cAMP-dependent protein kinase (PKA) may be mediated in part by the anchoring of PKA to a family of A-kinase anchor proteins (AKAPs) positioned in close proximity to target proteins. This interaction is thought to depend on binding of the type II regulatory (RII) sub...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Burton KA,Johnson BD,Hausken ZE,Westenbroek RE,Idzerda RL,Scheuer T,Scott JD,Catterall WA,McKnight GS

更新日期：1997-09-30 00:00:00

abstract：:FUS3 is functionally redundant with KSS1, a homologous yeast protein kinase, for a step(s) in signal transduction between the beta subunit of the guanine nucleotide binding protein (G protein), STE4, and the mating type-specific transcriptional activator, STE12. Either FUS3 or KSS1 can execute this function; when neit...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Elion EA,Brill JA,Fink GR

更新日期：1991-11-01 00:00:00

abstract：:The circadian clock is a global regulatory mechanism that controls the expression of 50 to 80% of transcripts in mammals. Some of the genes controlled by the circadian clock are oncogenes or tumor suppressors. Among these Myc has been the focus of several studies which have investigated the effect of clock genes and p...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Liu Z,Selby CP,Yang Y,Lindsey-Boltz LA,Cao X,Eynullazada K,Sancar A

更新日期：2020-09-01 00:00:00

abstract：:Defending cellular integrity against disturbances in intracellular concentrations of ATP ([ATP](i)) is predicated on coordinating the selection of substrates and their flux through metabolic pathways (metabolic signaling), ATP transfer from sites of production to utilization (energetic signaling), and the regulation o...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ruiz-Stewart I,Tiyyagura SR,Lin JE,Kazerounian S,Pitari GM,Schulz S,Martin E,Murad F,Waldman SA

更新日期：2004-01-06 00:00:00

abstract：:Viral membrane fusion proteins of class I are trimers in which the protomeric unit is a complex of a surface subunit (SU) and a fusion active transmembrane subunit (TM). Here we have studied how the protomeric units of Moloney murine leukemia virus envelope protein (Env) are activated in relation to each other, sequen...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sjöberg M,Löving R,Lindqvist B,Garoff H

更新日期：2017-03-07 00:00:00

abstract：:Neuroglobin (Ngb), a vertebrate globin expressed primarily in neurons, is induced by and protects against neuronal hypoxia and cerebral ischemia. To investigate the spectrum and mechanism of Ngb's neuroprotective action, we studied the effect of transgenic overexpression of Ngb on NMDA and beta-amyloid (Abeta) toxicit...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Khan AA,Mao XO,Banwait S,Jin K,Greenberg DA

更新日期：2007-11-27 00:00:00

abstract：:Molecular dynamics simulations show that the desolvation rates of isotopes of Li(+), K(+), Rb(+), Ca(2+), Sr(2+), and Ba(2+) may have a relatively strong dependence on the metal cation mass. This inference is based on the observation that the exchange rate constant, k(wex), for water molecules in the first hydration s...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hofmann AE,Bourg IC,DePaolo DJ

更新日期：2012-11-13 00:00:00

abstract：:Bar-coded multiplexed sequencing approaches based on new-generation sequencing technologies provide capacity to sequence a mapping population in a single sequencing run. However, such approaches usually generate low-coverage and error-prone sequences for each line in a population. Thus, it is a significant challenge t...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Xie W,Feng Q,Yu H,Huang X,Zhao Q,Xing Y,Yu S,Han B,Zhang Q

更新日期：2010-06-08 00:00:00

abstract：:We used integrin alphaLbeta2 heterodimers containing I domains locked open (active) or closed (inactive) with disulfide bonds to investigate regulatory interactions among domains in integrins. mAbs to the alphaL I domain and beta2 I-like domain inhibit adhesion of wild-type alphaLbeta2 to intercellular adhesion molecu...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lu C,Shimaoka M,Zang Q,Takagi J,Springer TA

更新日期：2001-02-27 00:00:00

abstract：:Exposure of Chinese hamster cells to reduced oxygen partial pressure results in a marked enhancement in the frequency of methotrexate resistance and dihydrofolate reductase gene amplification. The frequency of enhanced resistance is a function of the length of exposure to hypoxic conditions and the time after recovery...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Rice GC,Hoy C,Schimke RT

更新日期：1986-08-01 00:00:00

abstract：:We predict by first principles a phase transition in alumina at approximately 3.7 Mbar and room temperature from the CaIrO(3)-type polymorph to another with the U(2)S(3)-type structure. Because alumina is used as window material in shock-wave experiments, this transformation should be important for the analysis of sho...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Umemoto K,Wentzcovitch RM

更新日期：2008-05-06 00:00:00

abstract：:Guamanian amyotrophic lateral sclerosis (ALS-G) and parkinsonism dementia (PD-G) have been epidemiologically linked to an environment severely deficient in calcium (Ca2+) and magnesium (Mg2+). Transient receptor potential melastatin 7 (TRPM7) is a bifunctional protein containing both channel and kinase domains that ha...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hermosura MC,Nayakanti H,Dorovkov MV,Calderon FR,Ryazanov AG,Haymer DS,Garruto RM

更新日期：2005-08-09 00:00:00

abstract：:Chlorpromazine (3 x 10(-4)M) prevents the stimulation of adenyl cyclase activity in thyroid membranes produced by thyrotropin and prostaglandin, ACTH stimulation of adenyl cyclase in adrenal tissue, and glucagon- and epinephrine-stimulation of adenyl cyclase activity in liver. Baseline activity is unaffected. Parathyr...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Wolff J,Jones AB

更新日期：1970-02-01 00:00:00

abstract：:Pancreatic ductal adenocarcinoma (PDAC) cells (PCC) have an exceptional propensity to metastasize early into intratumoral, chemokine-secreting nerves. However, we hypothesized the opposite process, that precancerous pancreatic cells secrete chemokines that chemoattract Schwann cells (SC) of nerves and thus induce read...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Demir IE,Kujundzic K,Pfitzinger PL,Saricaoglu ÖC,Teller S,Kehl T,Reyes CM,Ertl LS,Miao Z,Schall TJ,Tieftrunk E,Haller B,Diakopoulos KN,Kurkowski MU,Lesina M,Krüger A,Algül H,Friess H,Ceyhan GO

更新日期：2017-01-03 00:00:00

abstract：:Rift Valley fever (RVF) is a vector-borne viral disease widespread in Africa. The primary cycle involves mosquitoes and wild and domestic ruminant hosts. Humans are usually contaminated after contact with infected ruminants. As many environmental, agricultural, epidemiological, and anthropogenic factors are implicated...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lancelot R,Béral M,Rakotoharinome VM,Andriamandimby SF,Héraud JM,Coste C,Apolloni A,Squarzoni-Diaw C,de La Rocque S,Formenty PB,Bouyer J,Wint GR,Cardinale E

更新日期：2017-01-31 00:00:00

abstract：:Ischemia of the myocardium and lower limbs is a common consequence of arterial disease and a major source of morbidity and mortality in modernized countries. Inducing neovascularization for the treatment of ischemia is an appealing therapeutic strategy for patients for whom traditional treatment modalities cannot be p...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Jang E,Albadawi H,Watkins MT,Edelman ER,Baker AB

更新日期：2012-01-31 00:00:00

abstract：:The amounts of mRNAs encoding alpha 1, alpha 6, beta 2, beta 3, gamma 2, and delta subunits of gamma-aminobutyrate type A (GABAA) receptors and the gold immunolabeling density of their translation products were monitored during the growth of neonatal rat granule cells in primary culture. We investigated possible corre...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Zheng TM,Zhu WJ,Puia G,Vicini S,Grayson DR,Costa E,Caruncho HJ

更新日期：1994-11-08 00:00:00

abstract：:The FKBP12-rapamycin-associated protein (FRAP; also called RAFT1/mTOR) regulates translation initiation and entry into the cell cycle. Depriving cells of amino acids or treating them with the small molecule rapamycin inhibits FRAP and results in rapid dephosphorylation and inactivation of the translational regulators ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Peterson RT,Desai BN,Hardwick JS,Schreiber SL

更新日期：1999-04-13 00:00:00

abstract：:Urinary acidification by the turtle bladder is due to a H+-ATPase that is located in the luminal membrane. The rate of H+ transport is stimulated by an increase in the ambient CO2. Using the fluorescent dye acridine orange, we showed that the mitochondria-rich cell of this equilibrium contains vesicles whose internal ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Gluck S,Cannon C,Al-Awqati Q

更新日期：1982-07-01 00:00:00

abstract：:Chemical modifications of RNAs have long been established as key modulators of nonprotein-coding RNA structure and function in cells. There is a growing appreciation that messenger RNA (mRNA) sequences responsible for directing protein synthesis can also be posttranscriptionally modified. The enzymatic incorporation o...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Eyler DE,Franco MK,Batool Z,Wu MZ,Dubuke ML,Dobosz-Bartoszek M,Jones JD,Polikanov YS,Roy B,Koutmou KS

更新日期：2019-11-12 00:00:00

abstract：:The basic helix-loop-helix transcriptional repressor Hairy-related transcription factor 2 (Hrt2) is expressed in ventricular, but not atrial, cardiomyocytes, and in endothelial and vascular smooth muscle cells. Mice homozygous for a null mutation of Hrt2 die perinatally from a spectrum of cardiac abnormalities, raisin...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Xin M,Small EM,van Rooij E,Qi X,Richardson JA,Srivastava D,Nakagawa O,Olson EN

更新日期：2007-05-08 00:00:00

abstract：:The amyloid beta-protein precursor (AbetaPP) is best known as the parent molecule to the amyloid beta-peptide that accumulates in the brains of patients with Alzheimer's disease. Secreted isoforms of AbetaPP that contain the Kunitz proteinase inhibitor domain are analogous to the previously identified cell-secreted pr...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Xu F,Davis J,Miao J,Previti ML,Romanov G,Ziegler K,Van Nostrand WE

更新日期：2005-12-13 00:00:00

abstract：:The unprecedented scale of the Ebola outbreak in Western Africa (2014-2015) has prompted an explosion of efforts to understand the transmission dynamics of the virus and to analyze the performance of possible containment strategies. Models have focused primarily on the reproductive numbers of the disease that represen...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lau MS,Dalziel BD,Funk S,McClelland A,Tiffany A,Riley S,Metcalf CJ,Grenfell BT

更新日期：2017-02-28 00:00:00

abstract：:A model chemical network involving reactions and diffusion is studied. Spatially and temporally ordered solutions of the equations are found by bifurcation theory. These solutions are calculated analytically and their stability is studied. Properties of these dissipative structures are discussed, and a comparison with...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Nicolis G,Auchmuty JF

更新日期：1974-07-01 00:00:00

abstract：:Confluent cultures of human fetal lung fibroblasts degrade approximately 10% of their newly synthesized collagen within the cell prior to secretion. This basal level of intracellular degradation could not be inhibited by colchicine or cytochalasin B, inhibitors of microtubular and microfilament function, respectively,...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Berg RA,Schwartz ML,Crystal RG

更新日期：1980-08-01 00:00:00

abstract：:From endonuclease EcoRI partial libraries of DNAs from mouse embryo and MOPC 141, a gamma 2b-producing myeloma, clones were isolated by using a DNA fragment carrying the gamma 2b constant (C) region gene as a hybridization probe. One clone from MOPC 141 contained a heavy chain variable (V) gene and the C gamma 2b gene...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Maki R,Traunecker A,Sakano H,Roeder W,Tonegawa S

更新日期：1980-04-01 00:00:00

abstract：:Antibody raised against the purified human erythrocyte glucose transporter specifically precipitated four proteins from normal and Rous sarcoma virus-transformed chicken embryo cells: a major protein of Mr 41,000 and minor proteins of Mr 68,000, 73,000, and 82,000. The Mr 41,000 and 82,000 proteins were found only in ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Salter DW,Baldwin SA,Lienhard GE,Weber MJ

更新日期：1982-03-01 00:00:00

abstract：:A detailed model for the structure and dynamics of the interior of the lipid bilayer in the liquid crystal phase is presented. The model includes two classes of motion: (i) the internal dynamics of the chains, determined from Brownian dynamics simulations with a continuous version of the Marcelja mean-field potential,...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Pastor RW,Venable RM,Karplus M

更新日期：1991-02-01 00:00:00