High frequencies of resting CD4+ T cells containing integrated viral DNA are found in rhesus macaques during acute lentivirus infections.

Abstract:

:We and others have reported that the vast majority of virus-producing CD4(+) T cells during the acute infection of rhesus macaques with simian immunodeficiency virus (SIV) or CXCR4 (X4)-using simian/human immunodeficiency viruses (SHIVs) exhibited a nonactivated phenotype. These findings have been extended to show that resting CD4(+) T lymphocytes collected from SIV- or X4-SHIV-infected animals during the first 10 days of infection continue to release virus ex vivo. Furthermore, we observed high frequencies of integrated viral DNA (up to 5.1 x 10(4) DNA copies per 10(5) cells) in circulating resting CD4(+) T cells during the first 10 days of the infection. Integration of SIV DNA was detected only in memory CD4(+) T cells and SHIVs preferentially integrated into resting naïve CD4(+) T cells. Taken together, these results show that during the acute infection large numbers of resting CD4(+) T cells carry integrated nonhuman primate lentiviral DNA and are the major source of progeny virions irrespective of coreceptor usage. Prompt and sustained interventions are therefore required to block the rapid systemic dissemination of virus and prevent an otherwise fatal clinical outcome.

authors

Nishimura Y,Sadjadpour R,Mattapallil JJ,Igarashi T,Lee W,Buckler-White A,Roederer M,Chun TW,Martin MA

doi

10.1073/pnas.0903022106

subject

Has Abstract

pub_date

2009-05-12 00:00:00

pages

8015-20

issue

19

eissn

0027-8424

issn

1091-6490

pii

0903022106

journal_volume

106

pub_type

杂志文章
  • Human placental alkaline phosphatase in liver and intestine.

    abstract::Three distinct forms of human alkaline phosphatase, presumably isozymes, are known, each apparently associated with a specific tissue. These are placental, intestinal, and liver (kidney and bone). We have used a specific immunoassay and HPLC to show that placental alkaline phosphatase is also present in extracts of li...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.82.18.6080

    authors: Garattini E,Margolis J,Heimer E,Felix A,Udenfriend S

    更新日期:1985-09-01 00:00:00

  • Three-dimensional structure of a protein from scorpion venom: a new structural class of neurotoxins.

    abstract::The three-dimensional crystal structure of variant-3 toxin from the scorpion Centruroides sculpturatus Ewing has been determined at 3 A resolution. Phases were obtained by use of K2PtCl4 and K2IrCl6 derivatives. The most prominent secondary structural features are two and a half turns of alpha-helix and a three-strand...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.77.11.6496

    authors: Fontecilla-Camps JC,Almassy RJ,Suddath FL,Watt DD,Bugg CE

    更新日期:1980-11-01 00:00:00

  • Photooxidation of cytochrome P450-BM3.

    abstract::High-valent iron-oxo species are thought to be intermediates in the catalytic cycles of oxygenases and peroxidases. An attractive route to these iron-oxo intermediates involves laser flash-quench oxidation of ferric hemes, as demonstrated by our work on the ferryl (compound II) and ferryl porphyrin radical cation (com...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1012381107

    authors: Ener ME,Lee YT,Winkler JR,Gray HB,Cheruzel L

    更新日期:2010-11-02 00:00:00

  • Expression of murine 21-hydroxylase in mouse adrenal glands and in transfected Y1 adrenocortical tumor cells.

    abstract::The S region of the murine major histocompatibility complex contains two structurally related genes (21-OHase A and 21-OHase B) that encode 21-hydroxylase (21-OHase), an enzyme essential for the synthesis of adrenal steroids. Expression of these two genes has been analyzed by using oligonucleotide probes specific for ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.82.23.7860

    authors: Parker KL,Chaplin DD,Wong M,Seidman JG,Smith JA,Schimmer BP

    更新日期:1985-12-01 00:00:00

  • Alkane biosynthesis by decarbonylation of aldehydes catalyzed by a particulate preparation from Pisum sativum.

    abstract::Mechanism of enzymatic conversion of a fatty acid to the corresponding alkane by the loss of the carboxyl carbon was investigated with particulate preparations from Pisum sativum. A heavy particulate preparation (sp. gr., 1.30 g/cm3) isolated by two density-gradient centrifugation steps catalyzed conversion of octadec...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.81.21.6613

    authors: Cheesbrough TM,Kolattukudy PE

    更新日期:1984-11-01 00:00:00

  • Photolabile chelators for the rapid photorelease of divalent cations.

    abstract::The properties of a recently synthesized photolabile chelator for divalent cations are described, the affinity of which for Ca2+ changes by some 5 orders of magnitude on illumination. The compound 1-(2-nitro-4,5-dimethoxyphenyl)-N,N,N',N'-tetrakis[(oxycarbonyl)me thyl]-1,2-ethanediamine (DM-nitrophen) binds Ca2+ (Kd a...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.85.17.6571

    authors: Kaplan JH,Ellis-Davies GC

    更新日期:1988-09-01 00:00:00

  • Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.

    abstract::O-GlcNAc is an intracellular posttranslational modification that governs myriad cell biological processes and is dysregulated in human diseases. Despite this broad pathophysiological significance, the biochemical effects of most O-GlcNAcylation events remain uncharacterized. One prevalent hypothesis is that O-GlcNAc m...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1722437115

    authors: Toleman CA,Schumacher MA,Yu SH,Zeng W,Cox NJ,Smith TJ,Soderblom EJ,Wands AM,Kohler JJ,Boyce M

    更新日期:2018-06-05 00:00:00

  • Inactivation of CDK2 is synthetically lethal to MYCN over-expressing cancer cells.

    abstract::Two genes have a synthetically lethal relationship when the silencing or inhibiting of 1 gene is only lethal in the context of a mutation or activation of the second gene. This situation offers an attractive therapeutic strategy, as inhibition of such a gene will only trigger cell death in tumor cells with an activate...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0901418106

    authors: Molenaar JJ,Ebus ME,Geerts D,Koster J,Lamers F,Valentijn LJ,Westerhout EM,Versteeg R,Caron HN

    更新日期:2009-08-04 00:00:00

  • The Escherichia coli RuvB branch migration protein forms double hexameric rings around DNA.

    abstract::The RuvB protein is induced in Escherichia coli as part of the SOS response to DNA damage. It is required for genetic recombination and the postreplication repair of DNA. In vitro, the RuvB protein promotes the branch migration of Holliday junctions and has a DNA helicase activity in reactions that require ATP hydroly...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.91.16.7618

    authors: Stasiak A,Tsaneva IR,West SC,Benson CJ,Yu X,Egelman EH

    更新日期:1994-08-02 00:00:00

  • Development of oligodendrocytes and Schwann cells studied with a monoclonal antibody against galactocerebroside.

    abstract::We have generated a hybridoma cell line secreting a monoclonal antibody that specifically binds to the surfaces of oligodendrocytes and Schwann cells, the cells involved in myelin formation in the central and peripheral nervous systems, respectively. Binding studies using purified sphingolipids showed that this antibo...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.79.8.2709

    authors: Ranscht B,Clapshaw PA,Price J,Noble M,Seifert W

    更新日期:1982-04-01 00:00:00

  • Complement membrane attack complexes activate noncanonical NF-κB by forming an Akt+ NIK+ signalosome on Rab5+ endosomes.

    abstract::Complement membrane attack complexes (MACs) promote inflammatory functions in endothelial cells (ECs) by stabilizing NF-κB-inducing kinase (NIK) and activating noncanonical NF-κB signaling. Here we report a novel endosome-based signaling complex induced by MACs to stabilize NIK. We found that, in contrast to cytokine-...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1503535112

    authors: Jane-wit D,Surovtseva YV,Qin L,Li G,Liu R,Clark P,Manes TD,Wang C,Kashgarian M,Kirkiles-Smith NC,Tellides G,Pober JS

    更新日期:2015-08-04 00:00:00

  • Nonplanar peptide bonds in proteins are common and conserved but not biased toward active sites.

    abstract::The planarity of peptide bonds is an assumption that underlies decades of theoretical modeling of proteins. Peptide bonds strongly deviating from planarity are considered very rare features of protein structure that occur for functional reasons. Here, empirical analyses of atomic-resolution protein structures reveal t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1107115108

    authors: Berkholz DS,Driggers CM,Shapovalov MV,Dunbrack RL Jr,Karplus PA

    更新日期:2012-01-10 00:00:00

  • Inhibition of ErbB3 by a monoclonal antibody that locks the extracellular domain in an inactive configuration.

    abstract::ErbB3 (HER3) is a member of the EGF receptor (EGFR) family of receptor tyrosine kinases, which, unlike the other three family members, contains a pseudo kinase in place of a tyrosine kinase domain. In cancer, ErbB3 activation is driven by a ligand-dependent mechanism through the formation of heterodimers with EGFR, Er...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1518361112

    authors: Lee S,Greenlee EB,Amick JR,Ligon GF,Lillquist JS,Natoli EJ Jr,Hadari Y,Alvarado D,Schlessinger J

    更新日期:2015-10-27 00:00:00

  • Ubiquitin signals autophagic degradation of cytosolic proteins and peroxisomes.

    abstract::Autophagy is responsible for nonspecific, bulk degradation of cytoplasmic components. Recent work has revealed also that there is specific, autophagic degradation of polyubiquitinated protein aggregates, whose buildup occurs during neurodegenerative disease. Here, we report that simple mono-ubiquitination of normally ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0810611105

    authors: Kim PK,Hailey DW,Mullen RT,Lippincott-Schwartz J

    更新日期:2008-12-30 00:00:00

  • Local kinetics of morphogen gradients.

    abstract::Some aspects of pattern formation in developing embryos can be described by nonlinear reaction-diffusion equations. An important class of these models accounts for diffusion and degradation of a locally produced single chemical species. At long times, solutions of such models approach a steady state in which the conce...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1019245108

    authors: Gordon PV,Sample C,Berezhkovskii AM,Muratov CB,Shvartsman SY

    更新日期:2011-04-12 00:00:00

  • Variation in neural V1aR predicts sexual fidelity and space use among male prairie voles in semi-natural settings.

    abstract::Although prairie voles (Microtus ochrogaster) are socially monogamous, males vary in both sexual and spatial fidelity. Most males form pairbonds, cohabit with one female, and defend territories. Wandering males, in contrast, have expansive home ranges that overlap many males and females. In the laboratory, pairing is ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0709116105

    authors: Ophir AG,Wolff JO,Phelps SM

    更新日期:2008-01-29 00:00:00

  • Transient retinoic acid signaling confers anterior-posterior polarity to the inner ear.

    abstract::Vertebrate hearing and balance are based in complex asymmetries of inner ear structure. Here, we identify retinoic acid (RA) as an extrinsic signal that acts directly on the ear rudiment to affect its compartmentalization along the anterior-posterior axis. A rostrocaudal wave of RA activity, generated by tissues surro...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1010547108

    authors: Bok J,Raft S,Kong KA,Koo SK,Dräger UC,Wu DK

    更新日期:2011-01-04 00:00:00

  • Single-cell cloning of colon cancer stem cells reveals a multi-lineage differentiation capacity.

    abstract::Colon carcinoma is one of the leading causes of death from cancer and is characterized by a heterogenic pool of cells with distinct differentiation patterns. Recently, it was reported that a population of undifferentiated cells from a primary tumor, so-called cancer stem cells (CSC), can reconstitute the original tumo...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0805706105

    authors: Vermeulen L,Todaro M,de Sousa Mello F,Sprick MR,Kemper K,Perez Alea M,Richel DJ,Stassi G,Medema JP

    更新日期:2008-09-09 00:00:00

  • Cultural implications of late Holocene climate change in the Cuenca Oriental, Mexico.

    abstract::There is currently no consensus on the importance of climate change in Mesoamerican prehistory. Some invoke drought as a causal factor in major cultural transitions, including the abandonment of many sites at 900 CE, while others conclude that cultural factors were more important. This lack of agreement reflects the f...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 历史文章,杂志文章

    doi:10.1073/pnas.1405653112

    authors: Bhattacharya T,Byrne R,Böhnel H,Wogau K,Kienel U,Ingram BL,Zimmerman S

    更新日期:2015-02-10 00:00:00

  • A molecular sensor that allows a gut commensal to control its nutrient foundation in a competitive ecosystem.

    abstract::Little is known about how members of the indigenous microflora interact with their mammalian hosts to establish mutually beneficial relationships. We have used a gnotobiotic mouse model to show that Bacteroides thetaiotaomicron, a component of the intestinal microflora of mice and humans, uses a repressor, FucR, as a ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.96.17.9833

    authors: Hooper LV,Xu J,Falk PG,Midtvedt T,Gordon JI

    更新日期:1999-08-17 00:00:00

  • Topological knots and links in proteins.

    abstract::Twenty years after their discovery, knots in proteins are now quite well understood. They are believed to be functionally advantageous and provide extra stability to protein chains. In this work, we go one step further and search for links-entangled structures, more complex than knots, which consist of several compone...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1615862114

    authors: Dabrowski-Tumanski P,Sulkowska JI

    更新日期:2017-03-28 00:00:00

  • DNA from recombinogenic lambda bacteriophages generated by arl mutant of Escherichia coli is cleaved by single-strand-specific endonuclease S1.

    abstract::When propagated on arl strains (a subclass of Escherichia coli hyper-rec mutants), lambda "Red-" duplication phages accumulated an enhanced potential for recombination. The physical properties of the recombinogenic phages thus obtained ("Arl-" phages) were similar to those of phages grown on arl+ bacteria. However, Ar...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章,收录出版

    doi:10.1073/pnas.76.12.6066

    authors: Hays JB,Korba BE

    更新日期:1979-12-01 00:00:00

  • Nickel: A micronutrient element for hydrogen-dependent growth of Rhizobium japonicum and for expression of urease activity in soybean leaves.

    abstract::Soybean plants and Rhizobium japonicum 122 DES, a hydrogen uptake-positive strain, were cultured in media purified to remove Ni. Supplemental Ni had no significant effect on the dry matter or total N content of plants. However, the addition of Ni to both nitrate-grown and symbiotically grown plants resulted in a 7- to...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.80.8.2253

    authors: Klucas RV,Hanus FJ,Russell SA,Evans HJ

    更新日期:1983-04-01 00:00:00

  • Membrane nanotubes induced by aqueous phase separation and stabilized by spontaneous curvature.

    abstract::Tubular membrane structures are widespread in eukaryotic cells, but the mechanisms underlying their formation and stability are not well understood. Previous work has focused on tube extrusion from cells and model membranes under the application of external forces. Here, we present novel membrane/polymer systems, wher...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1015892108

    authors: Li Y,Lipowsky R,Dimova R

    更新日期:2011-03-22 00:00:00

  • Transcriptional and translational control of cytoplasmic proteins after serum stimulation of quiescent Swiss 3T3 cells.

    abstract::The synthesis of cytoplasmic proteins from quiescent and serum-stimulated Swiss 3T3 cells was compared by two-dimensional polyacrylamide gel electrophoresis. Four new proteins of Mrs 26,000, 28,000, 45,000, and 47,000 designated N26, N28, N45, and N47, which were not detectable in quiescent cells, appeared 60 min afte...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.78.9.5712

    authors: Thomas G,Thomas G,Luther H

    更新日期:1981-09-01 00:00:00

  • Configurational entropy of basaltic melts in Earth's mantle.

    abstract::Although geophysical observations of mantle regions that suggest the presence of partial melt have often been interpreted in light of the properties of basaltic liquids erupted at the surface, the seismic and rheological consequences of partial melting in the upper mantle depend instead on the properties of interstiti...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2014519117

    authors: Lee SK,Mosenfelder JL,Park SY,Lee AC,Asimow PD

    更新日期:2020-09-08 00:00:00

  • Implications of an antiparallel dimeric structure of nonphosphorylated STAT1 for the activation-inactivation cycle.

    abstract::IFN-gamma treatment of cells leads to tyrosine phosphorylation of signal transducer and activator of transcription (STAT) 1 followed by dimerization through a reciprocal Src homology 2-phosphotyrosine interaction near the -COOH end of each monomer, forming a parallel structure that accumulates in the nucleus to drive ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0501063102

    authors: Zhong M,Henriksen MA,Takeuchi K,Schaefer O,Liu B,ten Hoeve J,Ren Z,Mao X,Chen X,Shuai K,Darnell JE Jr

    更新日期:2005-03-15 00:00:00

  • Partial similarities between yeast and liver alcohol dehydrogenases.

    abstract::The primary structure of about half of the protein chain of yeast alcohol dehydrogenase has been determined and compared with the amino-acid sequences of other dehydrogenases. The enzyme is found to be distantly related to horse-liver alcohol dehydrogenase, although these two proteins have different quaternary structu...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.70.8.2295

    authors: Jörnvall H

    更新日期:1973-08-01 00:00:00

  • Thiazide diuretic drug receptors in rat kidney: identification with [3H]metolazone.

    abstract::Thiazides and related diuretics inhibit NaCl reabsorption in the distal tubule through an unknown mechanism. We report here that [3H]metolazone, a diuretic with a thiazide-like mechanism of action, labels a site in rat kidney membranes that has characteristics of the thiazide-sensitive ion transporter. [3H]Metolazone ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.85.7.2311

    authors: Beaumont K,Vaughn DA,Fanestil DD

    更新日期:1988-04-01 00:00:00

  • Transition state for the NSD2-catalyzed methylation of histone H3 lysine 36.

    abstract::Nuclear receptor SET domain containing protein 2 (NSD2) catalyzes the methylation of histone H3 lysine 36 (H3K36). It is a determinant in Wolf-Hirschhorn syndrome and is overexpressed in human multiple myeloma. Despite the relevance of NSD2 to cancer, there are no potent, selective inhibitors of this enzyme reported. ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1521036113

    authors: Poulin MB,Schneck JL,Matico RE,McDevitt PJ,Huddleston MJ,Hou W,Johnson NW,Thrall SH,Meek TD,Schramm VL

    更新日期:2016-02-02 00:00:00