The catalytic cycle of a thiamin diphosphate enzyme examined by cryocrystallography.

Abstract:

:Enzymes that use the cofactor thiamin diphosphate (ThDP, 1), the biologically active form of vitamin B(1), are involved in numerous metabolic pathways in all organisms. Although a theory of the cofactor's underlying reaction mechanism has been established over the last five decades, the three-dimensional structures of most major reaction intermediates of ThDP enzymes have remained elusive. Here, we report the X-ray structures of key intermediates in the oxidative decarboxylation of pyruvate, a central reaction in carbon metabolism catalyzed by the ThDP- and flavin-dependent enzyme pyruvate oxidase (POX)3 from Lactobacillus plantarum. The structures of 2-lactyl-ThDP (LThDP, 2) and its stable phosphonate analog, of 2-hydroxyethyl-ThDP (HEThDP, 3) enamine and of 2-acetyl-ThDP (AcThDP, 4; all shown bound to the enzyme's active site) provide profound insights into the chemical mechanisms and the stereochemical course of thiamin catalysis. These snapshots also suggest a mechanism for a phosphate-linked acyl transfer coupled to electron transfer in a radical reaction of pyruvate oxidase.

journal_name

Nat Chem Biol

journal_title

Nature chemical biology

authors

Wille G,Meyer D,Steinmetz A,Hinze E,Golbik R,Tittmann K

doi

10.1038/nchembio788

subject

Has Abstract

pub_date

2006-06-01 00:00:00

pages

324-8

issue

6

eissn

1552-4450

issn

1552-4469

pii

nchembio788

journal_volume

2

pub_type

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