Extracellular respiration of dimethyl sulfoxide by Shewanella oneidensis strain MR-1.

Abstract:

:Shewanella species are renowned for their respiratory versatility, including their ability to respire poorly soluble substrates by using enzymatic machinery that is localized to the outside of the cell. The ability to engage in "extracellular respiration" to date has focused primarily on respiration of minerals. Here, we identify two gene clusters in Shewanella oneidensis strain MR-1 that each contain homologs of genes required for metal reduction and genes that are predicted to encode dimethyl sulfoxide (DMSO) reductase subunits. Molecular and genetic analyses of these clusters indicate that one (SO1427-SO1432) is required for anaerobic respiration of DMSO. We show that DMSO respiration is an extracellular respiratory process through the analysis of mutants defective in type II secretion, which is required for transporting proteins to the outer membrane in Shewanella. Moreover, immunogold labeling of DMSO reductase subunits reveals that they reside on the outer leaflet of the outer membrane under anaerobic conditions. The extracellular localization of the DMSO reductase in S. oneidensis suggests these organisms may perceive DMSO in the environment as an insoluble compound.

authors

Gralnick JA,Vali H,Lies DP,Newman DK

doi

10.1073/pnas.0505959103

keywords:

subject

Has Abstract

pub_date

2006-03-21 00:00:00

pages

4669-74

issue

12

eissn

0027-8424

issn

1091-6490

pii

0505959103

journal_volume

103

pub_type

杂志文章
  • Dynamic integration of information about salience and value for saccadic eye movements.

    abstract::Humans shift their gaze to a new location several times per second. It is still unclear what determines where they look next. Fixation behavior is influenced by the low-level salience of the visual stimulus, such as luminance, contrast, and color, but also by high-level task demands and prior knowledge. Under natural ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1115638109

    authors: Schütz AC,Trommershäuser J,Gegenfurtner KR

    更新日期:2012-05-08 00:00:00

  • Memory CD8 T cell responses exceeding a large but definable threshold provide long-term immunity to malaria.

    abstract::Infection of mice with sporozoites of Plasmodium berghei or Plasmodium yoelii has been used extensively to evaluate liver-stage protection by candidate preerythrocytic malaria vaccines. Unfortunately, repeated success of such vaccines in mice has not translated readily to effective malaria vaccines in humans. Thus, mi...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0805452105

    authors: Schmidt NW,Podyminogin RL,Butler NS,Badovinac VP,Tucker BJ,Bahjat KS,Lauer P,Reyes-Sandoval A,Hutchings CL,Moore AC,Gilbert SC,Hill AV,Bartholomay LC,Harty JT

    更新日期:2008-09-16 00:00:00

  • Histone chaperone Anp32e removes H2A.Z from DNA double-strand breaks and promotes nucleosome reorganization and DNA repair.

    abstract::The repair of DNA double-strand breaks (DSBs) requires open, flexible chromatin domains. The NuA4-Tip60 complex creates these flexible chromatin structures by exchanging histone H2A.Z onto nucleosomes and promoting acetylation of histone H4. Here, we demonstrate that the accumulation of H2A.Z on nucleosomes at DSBs is...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1504868112

    authors: Gursoy-Yuzugullu O,Ayrapetov MK,Price BD

    更新日期:2015-06-16 00:00:00

  • The fossil record of phenotypic integration and modularity: A deep-time perspective on developmental and evolutionary dynamics.

    abstract::Variation is the raw material for natural selection, but the factors shaping variation are still poorly understood. Genetic and developmental interactions can direct variation, but there has been little synthesis of these effects with the extrinsic factors that can shape biodiversity over large scales. The study of ph...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1403667112

    authors: Goswami A,Binder WJ,Meachen J,O'Keefe FR

    更新日期:2015-04-21 00:00:00

  • Ubiquitous cell-surface glycoprotein on tumor cells is proliferation-associated receptor for transferrin.

    abstract::A murine monoclonal antibody (OKT9) raised against human leukemic cells binds to a wide variety of leukemia and tumor cell lines and to a minority of leukemia cells taken directly from patients. Fetal thymus and liver are strongly reactive as are some normal, immature hemopoietic cells and activated lymphocytes. React...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.78.7.4515

    authors: Sutherland R,Delia D,Schneider C,Newman R,Kemshead J,Greaves M

    更新日期:1981-07-01 00:00:00

  • Serological characterization of B-tropic viruses of C57BL mice: possible origin by recombination of endogenous N-tropic and xenotropic viruses.

    abstract::The serological properties of the gag gene products p15 and p12 of N- and B-tropic viruses of C57BL mice have been examined. Although these viruses were serologically identical by competition assays for proteins gp71 and p30, they were readily distinguishable in competition assays for proteins p15 and p12. Two isolate...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.75.9.4553

    authors: Benade LE,Ihle JN,Declève A

    更新日期:1978-09-01 00:00:00

  • Shaping a bacterial genome by large chromosomal replacements, the evolutionary history of Streptococcus agalactiae.

    abstract::Bacterial populations are subject to complex processes of diversification that involve mutation and horizontal DNA transfer mediated by transformation, transduction, or conjugation. Tracing the evolutionary events leading to genetic changes allows us to infer the history of a microbe. Here, we combine experimental and...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0803654105

    authors: Brochet M,Rusniok C,Couvé E,Dramsi S,Poyart C,Trieu-Cuot P,Kunst F,Glaser P

    更新日期:2008-10-14 00:00:00

  • AthPEX10, a nuclear gene essential for peroxisome and storage organelle formation during Arabidopsis embryogenesis.

    abstract::In yeasts and mammals, PEX10 encodes an integral membrane protein with a C3HC4 RING finger motif in its C-terminal domain and is required for peroxisome biogenesis and matrix protein import. In humans, its dysfunction in peroxisome biogenesis leads to severe Zellweger Syndrome and infantile Refsum disease. Here we sho...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1633697100

    authors: Schumann U,Wanner G,Veenhuis M,Schmid M,Gietl C

    更新日期:2003-08-05 00:00:00

  • Formation of DNA triplexes accounts for arrests of DNA synthesis at d(TC)n and d(GA)n tracts.

    abstract::To study the mechanism of arrest of DNA synthesis at d(TC)n and d(GA)n sequences, single-stranded DNA molecules including d(TC)27 or d(TC)31 tracts or a d(GA)27 tract were used as templates for in vitro assays of complementary DNA synthesis performed by extension of a primer with the Klenow polymerase or the Taq polym...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.88.2.507

    authors: Baran N,Lapidot A,Manor H

    更新日期:1991-01-15 00:00:00

  • Construction of an extended three-dimensional idiotope map by electron microscopic analysis of idiotope-anti-idiotope complexes.

    abstract::A three-dimensional map of the positions of four idiotypic determinants (idiotopes or Ids) and an isotypic determinant was derived by transmission electron microscopy of negatively stained immune complexes. Each complex was composed of a monoclonal Id-expressing IgG and one or two varieties of monoclonal anti-Id (or a...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.14.4984

    authors: Roux KH,Monafo WJ,Davie JM,Greenspan NS

    更新日期:1987-07-01 00:00:00

  • Complex pattern of Mycobacterium marinum gene expression during long-term granulomatous infection.

    abstract::During latent infection of humans with Mycobacterium tuberculosis, bacteria persist in the asymptomatic host within granulomas, organized collections of differentiated macrophages, and other immune cells. The mechanisms for persistence remain poorly understood, as is the metabolic and replicative state of the microbes...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.002024599

    authors: Chan K,Knaak T,Satkamp L,Humbert O,Falkow S,Ramakrishnan L

    更新日期:2002-03-19 00:00:00

  • Footprint of Deepwater Horizon blowout impact to deep-water coral communities.

    abstract::On April 20, 2010, the Deepwater Horizon (DWH) blowout occurred, releasing more oil than any accidental spill in history. Oil release continued for 87 d and much of the oil and gas remained in, or returned to, the deep sea. A coral community significantly impacted by the spill was discovered in late 2010 at 1,370 m de...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1403492111

    authors: Fisher CR,Hsing PY,Kaiser CL,Yoerger DR,Roberts HH,Shedd WW,Cordes EE,Shank TM,Berlet SP,Saunders MG,Larcom EA,Brooks JM

    更新日期:2014-08-12 00:00:00

  • T-bet-dependent expression of osteopontin contributes to T cell polarization.

    abstract::The osteopontin (Opn) glycoprotein has been implicated in diverse physiological processes, including vascularization, bone formation, and inflammatory responses. Studies of its role in immune responses has suggested that Opn can set the early stage of type-1 immune (cell-mediated) responses through differential regula...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0508666102

    authors: Shinohara ML,Jansson M,Hwang ES,Werneck MB,Glimcher LH,Cantor H

    更新日期:2005-11-22 00:00:00

  • Organic-mineral interfacial chemistry drives heterogeneous nucleation of Sr-rich (Ba x , Sr1-x )SO4 from undersaturated solution.

    abstract::Sr-bearing marine barite [(Ba x , Sr1-x )SO4] cycling has been widely used to reconstruct geochemical evolutions of paleoenvironments. However, an understanding of barite precipitation in the ocean, which is globally undersaturated with respect to barite, is missing. Moreo...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1821065116

    authors: Deng N,Stack AG,Weber J,Cao B,De Yoreo JJ,Hu Y

    更新日期:2019-07-02 00:00:00

  • A neurohypophyseal hormone analog with selective oxytocin-like activities and resistance to enzymatic inactivation: an approach to the design of peptide drugs.

    abstract::Stepwise, synthetic alteration of oxytocin, guided by conformational and enzymological considerations, has led to analogs with specifically modified activity profiles and resistance to enzymatic inactivation. General requirements for the design of peptides with therapeutic value are discussed. ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.71.5.1901

    authors: Walter R,Yamanaka T,Sakakibara S

    更新日期:1974-05-01 00:00:00

  • Isolation and characterization of adult bovine heart muscle chalones.

    abstract::A three-step purification procedure for the isolation of heart muscle chalones is described. The method uses ultrafiltration followed by concanavalin A-Sepharose affinity chromatography and subsequent sucrose density gradient centrifugation. Analytical ultracentrifugation of the highly purified chalone fraction indica...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.78.7.4161

    authors: Kriek JA,van der Walt BJ,Bester AJ

    更新日期:1981-07-01 00:00:00

  • Pronounced climatic variations in Alaska during the last two millennia.

    abstract::Paired oxygen-isotopic analyses of abiotic carbonate and benthic-ostracode shells from lake sediments provide a continuous quantitative record of growing-season temperature for the past 2000 years in the northwestern foothills of the Alaska Range. This record reveals three time intervals of comparable warmth: anno Dom...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.181333798

    authors: Hu FS,Ito E,Brown TA,Curry BB,Engstrom DR

    更新日期:2001-09-11 00:00:00

  • Cytosynalin: a Mr 35,000 cytoskeleton-interacting and calmodulin-binding protein.

    abstract::A Mr 35,000 calmodulin-binding protein, which also possesses the ability to interact with a number of cytoskeletal elements, was purified from bovine synaptosomal membranes, using hydroxylapatite and phosphocellulose column chromatography. We call this protein "cytosynalin," which is derived from a combination of the ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.7.1916

    authors: Sobue K,Okabe T,Kadowaki K,Itoh K,Tanaka T,Fujio Y

    更新日期:1987-04-01 00:00:00

  • Kinetics of mature T-cell development in the thymus.

    abstract::We have reexamined the balance between cell birth, cell maturation, and cell death in the thymus by labeling dividing thymocytes and their progeny in vivo with [3H]-thymidine, isolating clearly defined subpopulations by fluorescence-activated cell sorting, and determining the distribution of label by autoradiography. ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.87.7.2579

    authors: Egerton M,Scollay R,Shortman K

    更新日期:1990-04-01 00:00:00

  • Transcriptional induction of two genes in human cells by beta interferon.

    abstract::The binding of interferons to distinct cell surface receptors leads to the induction of synthesis of several unique polypeptides and their corresponding mRNAs (1-6). We have isolated two cDNAs that are complementary to nuclear RNA whose synthesis is induced from undetectable levels to maximal rates of transcription wi...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.81.21.6733

    authors: Larner AC,Jonak G,Cheng YS,Korant B,Knight E,Darnell JE Jr

    更新日期:1984-11-01 00:00:00

  • Modeling the status, trends, and impacts of wild bee abundance in the United States.

    abstract::Wild bees are highly valuable pollinators. Along with managed honey bees, they provide a critical ecosystem service by ensuring stable pollination to agriculture and wild plant communities. Increasing concern about the welfare of both wild and managed pollinators, however, has prompted recent calls for national evalua...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1517685113

    authors: Koh I,Lonsdorf EV,Williams NM,Brittain C,Isaacs R,Gibbs J,Ricketts TH

    更新日期:2016-01-05 00:00:00

  • Surface photometry of celestial sources from a space vehicle: introduction and observational procedures.

    abstract::Diffuse celestial sources of relatively low surface brightness such as the Milky Way, zodiacal light, and gegenschein (or contre lumière) can be studied most reliably from above the earth's atmosphere with equipment flown in artificial satellites. We review the techniques used and some of the difficulties encountered ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.69.3.694

    authors: Roach FE,Carroll B,Aller LH,Smith L

    更新日期:1972-03-01 00:00:00

  • Synergistic and promoter-selective activation of transcription by recruitment of transcription factors TFIID and TFIIB.

    abstract::Eukaryotic transcriptional activators may function by stimulating formation of RNA polymerase II preinitiation complexes at the core promoter of genes. In this case, their mode of action will intrinsically depend on how these complexes assemble on promoters in living cells, an issue that remains largely unexplored. He...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.94.15.8036

    authors: Gonzalez-Couto E,Klages N,Strubin M

    更新日期:1997-07-22 00:00:00

  • Good genes sexual selection in nature.

    abstract::Whether the mate sampling and choice performed by females in nature influences offspring performance is a controversial issue in theory and an open empirical question. Pronghorn (Antilocapra americana) females engage in an obvious and energetically expensive mate sampling process to identify vigorous males. Although i...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0608184103

    authors: Byers JA,Waits L

    更新日期:2006-10-31 00:00:00

  • Ultrasonic vocalization impairment of Foxp2 (R552H) knockin mice related to speech-language disorder and abnormality of Purkinje cells.

    abstract::Previous studies have demonstrated that mutation in the forkhead domain of the forkhead box P2 (FOXP2) protein (R553H) causes speech-language disorders. To further analyze FOXP2 function in speech learning, we generated a knockin (KI) mouse for Foxp2 (R552H) [Foxp2 (R552H)-KI], corresponding to the human FOXP2 (R553H)...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0712298105

    authors: Fujita E,Tanabe Y,Shiota A,Ueda M,Suwa K,Momoi MY,Momoi T

    更新日期:2008-02-26 00:00:00

  • Spectrum and chemical composition of the remarkable planetary nebula NGC 6537.

    abstract::Observations with the image tube scanner at the Shane 3-m telescope are combined with data obtained with the International Ultraviolet Explorer to assess the spectrum of the remarkable high-excitation planetary nebula NGC 6537. We have analyzed the spectrum of this nitrogen-rich object with the aid of the theoretical ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.82.8.2202

    authors: Feibelman W,Aller LH,Keyes CD,Czyzak SJ

    更新日期:1985-04-01 00:00:00

  • Recovery of taste organs and sensory function after severe loss from Hedgehog/Smoothened inhibition with cancer drug sonidegib.

    abstract::Striking taste disturbances are reported in cancer patients treated with Hedgehog (HH)-pathway inhibitor drugs, including sonidegib (LDE225), which block the HH pathway effector Smoothened (SMO). We tested the potential for molecular, cellular, and functional recovery in mice from the severe disruption of taste-organ ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1712881114

    authors: Kumari A,Ermilov AN,Grachtchouk M,Dlugosz AA,Allen BL,Bradley RM,Mistretta CM

    更新日期:2017-11-28 00:00:00

  • The skeleton of tropical intraseasonal oscillations.

    abstract::The Madden-Julian oscillation (MJO) is the dominant mode of variability in the tropical atmosphere on intraseasonal timescales and planetary spatial scales. Despite the primary importance of the MJO and the decades of research progress since its original discovery, a generally accepted theory for its essential mechani...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0903367106

    authors: Majda AJ,Stechmann SN

    更新日期:2009-05-26 00:00:00

  • High-affinity transport of glutathione is part of a multicomponent system essential for mitochondrial function.

    abstract::Glutathione, an essential cellular antioxidant required for mitochondrial function, is not synthesized by mitochondria but is imported from the cytosol. Rat liver mitochondria have a multicomponent system that underlies the remarkable ability of mitochondria to take up and retain glutathione. At external glutathione l...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.87.18.7185

    authors: Mårtensson J,Lai JC,Meister A

    更新日期:1990-09-01 00:00:00

  • Allosteric modulation of alternatively spliced Ca2+-activated Cl- channels TMEM16A by PI(4,5)P2 and CaMKII.

    abstract::Transmembrane 16A (TMEM16A, anoctamin1), 1 of 10 TMEM16 family proteins, is a Cl- channel activated by intracellular Ca2+ and membrane voltage. This channel is also regulated by the membrane phospholipid phosphatidylinositol 4,5-bisphosphate [PI(4,5)P2]. We find that two splice variants of TMEM16A show different sensi...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2014520117

    authors: Ko W,Jung SR,Kim KW,Yeon JH,Park CG,Nam JH,Hille B,Suh BC

    更新日期:2020-12-01 00:00:00