Towards complete cofactor arrangement in the 3.0 A resolution structure of photosystem II.

Abstract:

:Oxygenic photosynthesis in plants, algae and cyanobacteria is initiated at photosystem II, a homodimeric multisubunit protein-cofactor complex embedded in the thylakoid membrane. Photosystem II captures sunlight and powers the unique photo-induced oxidation of water to atmospheric oxygen. Crystallographic investigations of cyanobacterial photosystem II have provided several medium-resolution structures (3.8 to 3.2 A) that explain the general arrangement of the protein matrix and cofactors, but do not give a full picture of the complex. Here we describe the most complete cyanobacterial photosystem II structure obtained so far, showing locations of and interactions between 20 protein subunits and 77 cofactors per monomer. Assignment of 11 beta-carotenes yields insights into electron and energy transfer and photo-protection mechanisms in the reaction centre and antenna subunits. The high number of 14 integrally bound lipids reflects the structural and functional importance of these molecules for flexibility within and assembly of photosystem II. A lipophilic pathway is proposed for the diffusion of secondary plastoquinone that transfers redox equivalents from photosystem II to the photosynthetic chain. The structure provides information about the Mn4Ca cluster, where oxidation of water takes place. Our study uncovers near-atomic details necessary to understand the processes that convert light to chemical energy.

journal_name

Nature

journal_title

Nature

authors

Loll B,Kern J,Saenger W,Zouni A,Biesiadka J

doi

10.1038/nature04224

keywords:

subject

Has Abstract

pub_date

2005-12-15 00:00:00

pages

1040-4

issue

7070

eissn

0028-0836

issn

1476-4687

pii

nature04224

journal_volume

438

pub_type

杂志文章

相关文献

NATURE文献大全
  • Identification of a proline residue as a transduction element involved in voltage gating of gap junctions.

    abstract::Gap junction channels are structurally distinct from other ion channels in that they comprise two hemichannels which interact head-to-head to form an aqueous channel between cells. Intercellular voltage differences together with increased intracellular concentrations of H+ and Ca2+ cause closure of these normally pate...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/365847a0

    authors: Suchyna TM,Xu LX,Gao F,Fourtner CR,Nicholson BJ

    更新日期:1993-10-28 00:00:00

  • Successful establishment of Wolbachia in Aedes populations to suppress dengue transmission.

    abstract::Genetic manipulations of insect populations for pest control have been advocated for some time, but there are few cases where manipulated individuals have been released in the field and no cases where they have successfully invaded target populations. Population transformation using the intracellular bacterium Wolbach...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature10356

    authors: Hoffmann AA,Montgomery BL,Popovici J,Iturbe-Ormaetxe I,Johnson PH,Muzzi F,Greenfield M,Durkan M,Leong YS,Dong Y,Cook H,Axford J,Callahan AG,Kenny N,Omodei C,McGraw EA,Ryan PA,Ritchie SA,Turelli M,O'Neill SL

    更新日期:2011-08-24 00:00:00

  • Complex mammalian-like haematopoietic system found in a colonial chordate.

    abstract::Haematopoiesis is an essential process that evolved in multicellular animals. At the heart of this process are haematopoietic stem cells (HSCs), which are multipotent and self-renewing, and generate the entire repertoire of blood and immune cells throughout an animal's life1. Although there have been comprehensive stu...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-018-0783-x

    authors: Rosental B,Kowarsky M,Seita J,Corey DM,Ishizuka KJ,Palmeri KJ,Chen SY,Sinha R,Okamoto J,Mantalas G,Manni L,Raveh T,Clarke DN,Tsai JM,Newman AM,Neff NF,Nolan GP,Quake SR,Weissman IL,Voskoboynik A

    更新日期:2018-12-01 00:00:00

  • A hexagonal planar transition-metal complex.

    abstract::Transition-metal complexes are widely used in the physical and biological sciences. They have essential roles in catalysis, synthesis, materials science, photophysics and bioinorganic chemistry. Our understanding of transition-metal complexes originates from Alfred Werner's realization that their three-dimensional sha...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-019-1616-2

    authors: Garçon M,Bakewell C,Sackman GA,White AJP,Cooper RI,Edwards AJ,Crimmin MR

    更新日期:2019-10-01 00:00:00

  • Krox-20 controls myelination in the peripheral nervous system.

    abstract::The molecular mechanisms controlling the process of myelination by Schwann cells remain elusive, despite recent progress in the identification and characterization of genes encoding myelin components (reviewed in ref. 1). We have created a null allele in the mouse Krox-20 gene, which encodes a zinc-finger transcriptio...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/371796a0

    authors: Topilko P,Schneider-Maunoury S,Levi G,Baron-Van Evercooren A,Chennoufi AB,Seitanidou T,Babinet C,Charnay P

    更新日期:1994-10-27 00:00:00

  • Imidazole inhibits a temperature-dependent component of mammalial skeletal muscle action potential.

    abstract::Temperature-dependent transition of conductance in ionic channels has been described in several membrane systems. We report here an abrupt change in the maximal rate of rise of the action potentials of the rat extensor digitorum longus (EDL) at 32 degrees C, indicating alteration in the functional characteristics of t...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/283485a0

    authors: Cheung DW,Daniel EE

    更新日期:1980-01-31 00:00:00

  • Electrical conduction through DNA molecules.

    abstract::The question of whether DNA is able to transport electrons has attracted much interest, particularly as this ability may play a role as a repair mechanism after radiation damage to the DNA helix. Experiments addressing DNA conductivity have involved a large number of DNA strands doped with intercalated donor and accep...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/18855

    authors: Fink HW,Schönenberger C

    更新日期:1999-04-01 00:00:00

  • A simple gadget nudges people to save energy in the shower.

    abstract:: ...

    journal_title:Nature

    pub_type: 新闻

    doi:10.1038/d41586-018-07471-1

    authors:

    更新日期:2018-11-01 00:00:00

  • Evolution of antibody immunity to SARS-CoV-2.

    abstract::Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has infected 78 million individuals and is responsible for over 1.7 million deaths to date. Infection is associated with development of variable levels of antibodies with neutralizing activity that can protect against infection in animal models1,2. Antibody ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-021-03207-w

    authors: Gaebler C,Wang Z,Lorenzi JCC,Muecksch F,Finkin S,Tokuyama M,Cho A,Jankovic M,Schaefer-Babajew D,Oliveira TY,Cipolla M,Viant C,Barnes CO,Bram Y,Breton G,Hägglöf T,Mendoza P,Hurley A,Turroja M,Gordon K,Millard KG,

    更新日期:2021-01-18 00:00:00

  • Clonal analysis of lineage fate in native haematopoiesis.

    abstract::Haematopoiesis, the process of mature blood and immune cell production, is functionally organized as a hierarchy, with self-renewing haematopoietic stem cells and multipotent progenitor cells sitting at the very top. Multiple models have been proposed as to what the earliest lineage choices are in these primitive haem...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature25168

    authors: Rodriguez-Fraticelli AE,Wolock SL,Weinreb CS,Panero R,Patel SH,Jankovic M,Sun J,Calogero RA,Klein AM,Camargo FD

    更新日期:2018-01-11 00:00:00

  • Observation of coherent optical information storage in an atomic medium using halted light pulses.

    abstract::Electromagnetically induced transparency is a quantum interference effect that permits the propagation of light through an otherwise opaque atomic medium; a 'coupling' laser is used to create the interference necessary to allow the transmission of resonant pulses from a 'probe' laser. This technique has been used to s...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35054017

    authors: Liu C,Dutton Z,Behroozi CH,Hau LV

    更新日期:2001-01-25 00:00:00

  • Crystal structure at 2.8 A resolution of a soluble form of the cell adhesion molecule CD2.

    abstract::The crystal structure of a soluble form of the T lymphocyte antigen CD2 provides the first complete view of the extracellular region of a cell adhesion molecule. The topology of the molecule, which comprises two immunoglobulin-like domains, is the same as that of the first two domains of CD4 but the relative domain or...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/360232a0

    authors: Jones EY,Davis SJ,Williams AF,Harlos K,Stuart DI

    更新日期:1992-11-19 00:00:00

  • Cyclin is degraded by the ubiquitin pathway.

    abstract::Cyclin degradation is the key step governing exit from mitosis and progress into the next cell cycle. When a region in the N terminus of cyclin is fused to a foreign protein, it produces a hybrid protein susceptible to proteolysis at mitosis. During the course of degradation, both cyclin and the hybrid form conjugates...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/349132a0

    authors: Glotzer M,Murray AW,Kirschner MW

    更新日期:1991-01-10 00:00:00

  • Sexual selection and the maintenance of sex.

    abstract::Sex is expensive. A population of females that reproduce asexually should prima facie have twice the growth rate of an otherwise equivalent anisogamous sexual population lacking paternal care, or a population with modes of paternal care that can be co-opted by parthenogenetic females. The two leading theories for the ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35079578

    authors: Siller S,Department of Zoology, University of Oxford, UK. steven.siller@zoo.ox.ac.uk.

    更新日期:2001-06-07 00:00:00

  • Regulation of cytolytic T-lymphocyte generation by B-cell stimulatory factor.

    abstract::The growth and differentiation of cytolytic T lymphocytes (CTL) is regulated by soluble growth hormones, of which interleukin-2 (IL-2) is considered to be of prime importance. Here we report that the lymphokine B-cell stimulatory factor (BSF-1 or interleukin-4) also has profound effects on the generation of these func...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/326795a0

    authors: Widmer MB,Grabstein KH

    更新日期:1987-04-23 00:00:00

  • Discovery and saturation analysis of cancer genes across 21 tumour types.

    abstract::Although a few cancer genes are mutated in a high proportion of tumours of a given type (>20%), most are mutated at intermediate frequencies (2-20%). To explore the feasibility of creating a comprehensive catalogue of cancer genes, we analysed somatic point mutations in exome sequences from 4,742 human cancers and the...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature12912

    authors: Lawrence MS,Stojanov P,Mermel CH,Robinson JT,Garraway LA,Golub TR,Meyerson M,Gabriel SB,Lander ES,Getz G

    更新日期:2014-01-23 00:00:00

  • Genetics and the public interest.

    abstract::The seemingly endless studies of the ethical connotations of genetics serve a valuable role in general understanding even if the ethical problems involved are often insubstantial. ...

    journal_title:Nature

    pub_type: 社论

    doi:10.1038/356365a0

    authors:

    更新日期:1992-04-02 00:00:00

  • Association of Cdk-activating kinase subunits with transcription factor TFIIH.

    abstract::The RNA polymerase II large subunit contains an essential carboxy-terminal domain (CTD) believed to be involved in the response to regulators during transcription initiation. The CTD is phosphorylated on a portion of RNA polymerase II molecules in vivo and it can be phosphorylated by the general transcription factor T...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/374280a0

    authors: Serizawa H,Mäkelä TP,Conaway JW,Conaway RC,Weinberg RA,Young RA

    更新日期:1995-03-16 00:00:00

  • Global variation in copy number in the human genome.

    abstract::Copy number variation (CNV) of DNA sequences is functionally significant but has yet to be fully ascertained. We have constructed a first-generation CNV map of the human genome through the study of 270 individuals from four populations with ancestry in Europe, Africa or Asia (the HapMap collection). DNA from these ind...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature05329

    authors: Redon R,Ishikawa S,Fitch KR,Feuk L,Perry GH,Andrews TD,Fiegler H,Shapero MH,Carson AR,Chen W,Cho EK,Dallaire S,Freeman JL,González JR,Gratacòs M,Huang J,Kalaitzopoulos D,Komura D,MacDonald JR,Marshall CR,Mei R,M

    更新日期:2006-11-23 00:00:00

  • Female transference and mate choice among Tana River red colobus.

    abstract::Red colobus are one of a small number of primate species in which females have been reported to transfer between breeding groups more commonly than males. Several authors have hypothesised that in such species transference may serve to reduce the risk to females of producing offspring of lower fitness through inbreedi...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/281568a0

    authors: Marsh CW

    更新日期:1979-10-18 00:00:00

  • High-throughput discovery of novel developmental phenotypes.

    abstract::Approximately one-third of all mammalian genes are essential for life. Phenotypes resulting from knockouts of these genes in mice have provided tremendous insight into gene function and congenital disorders. As part of the International Mouse Phenotyping Consortium effort to generate and phenotypically characterize 5,...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature19356

    authors: Dickinson ME,Flenniken AM,Ji X,Teboul L,Wong MD,White JK,Meehan TF,Weninger WJ,Westerberg H,Adissu H,Baker CN,Bower L,Brown JM,Caddle LB,Chiani F,Clary D,Cleak J,Daly MJ,Denegre JM,Doe B,Dolan ME,Edie SM,Fuchs

    更新日期:2016-09-22 00:00:00

  • Evidence for a macroscopic electric field in the sedimentation profiles of charged colloids.

    abstract::The determination of molecular masses from barometric sedimentation profiles, a main topic in ultracentrifugal analysis, is thought to be quantitatively correct for non-interacting particles. Whereas this expectation is justified for uncharged colloids or macromolecules at low volume fractions, early ultracentrifugati...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature02672

    authors: Raşa M,Philipse AP

    更新日期:2004-06-24 00:00:00

  • Gene inhibition using antisense oligodeoxynucleotides.

    abstract::Antisense oligodeoxynucleotides (ODNs) have great promise as agents for the specific manipulation of gene expression. Until recently, nonspecific effects of ODNs often confounded the interpretation of antisense studies. Improvements in ODN chemistry and cellular delivery techniques now allow for more potent and specif...

    journal_title:Nature

    pub_type: 杂志文章,评审

    doi:10.1038/372333a0

    authors: Wagner RW

    更新日期:1994-11-24 00:00:00

  • Potent antitumour activity of a new class of tumour-specific killer cells.

    abstract::Two approaches to the antibody-directed targeting of toxic or cytolytic activity and augmentation of cellular immune responses have been explored for tumour immunotherapy, but so far success has been limited. Obstacles facing immunotherapy are the limited accessibility of antibodies or antibody conjugates to solid tum...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/385078a0

    authors: Chen SY,Yang AG,Chen JD,Kute T,King CR,Collier J,Cong Y,Yao C,Huang XF

    更新日期:1997-01-02 00:00:00

  • The entorhinal grid map is discretized.

    abstract::The medial entorhinal cortex (MEC) is part of the brain's circuit for dynamic representation of self-location. The metric of this representation is provided by grid cells, cells with spatial firing fields that tile environments in a periodic hexagonal pattern. Limited anatomical sampling has obscured whether the grid ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature11649

    authors: Stensola H,Stensola T,Solstad T,Frøland K,Moser MB,Moser EI

    更新日期:2012-12-06 00:00:00

  • The Earth's 'hum' is driven by ocean waves over the continental shelves.

    abstract::Observations show that the seismic normal modes of the Earth at frequencies near 10 mHz are excited at a nearly constant level in the absence of large earthquakes. This background level of excitation has been called the 'hum' of the Earth, and is equivalent to the maximum excitation from a magnitude 5.75 earthquake. I...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature05536

    authors: Webb SC

    更新日期:2007-02-15 00:00:00

  • Measurement of thermal contribution to photoreceptor sensitivity.

    abstract::Activation of a visual pigment molecule to initiate phototransduction requires a minimum energy, Ea, that need not be wholly derived from a photon, but may be supplemented by heat. Theory predicts that absorbance at very long wavelengths declines with the fraction of molecules that have a sufficient complement of ther...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35003242

    authors: Koskelainen A,Ala-Laurila P,Fyhrquist N,Donner K

    更新日期:2000-01-13 00:00:00

  • The structural basis of the activation of Ras by Sos.

    abstract::The crystal structure of human H-Ras complexed with the Ras guanine-nucleotide-exchange-factor region of the Son of sevenless (Sos) protein has been determined at 2.8 A resolution. The normally tight interaction of nucleotides with Ras is disrupted by Sos in two ways. First, the insertion into Ras of an alpha-helix fr...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/28548

    authors: Boriack-Sjodin PA,Margarit SM,Bar-Sagi D,Kuriyan J

    更新日期:1998-07-23 00:00:00

  • X-ray analysis of beta B2-crystallin and evolution of oligomeric lens proteins.

    abstract::The beta, gamma-crystallins form a class of homologous proteins in the eye lens. Each gamma-crystallin comprises four topologically equivalent, Greek key motifs; pairs of motifs are organized around a local dyad to give domains and two similar domains are in turn related by a further local dyad. Sequence comparisons a...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/347776a0

    authors: Bax B,Lapatto R,Nalini V,Driessen H,Lindley PF,Mahadevan D,Blundell TL,Slingsby C

    更新日期:1990-10-25 00:00:00

  • Wave-particle duality of C(60) molecules.

    abstract::Quantum superposition lies at the heart of quantum mechanics and gives rise to many of its paradoxes. Superposition of de Broglie matter waves' has been observed for massive particles such as electrons, atoms and dimers, small van der Waals clusters, and neutrons. But matter wave interferometry with larger objects has...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/44348

    authors: Arndt M,Nairz O,Vos-Andreae J,Keller C,van der Zouw G,Zeilinger A

    更新日期:1999-10-14 00:00:00