An anatomy of normal and malignant gene expression.

Abstract:

:A gene's expression pattern provides clues to its role in normal physiology and disease. To provide quantitative expression levels on a genome-wide scale, the Cancer Genome Anatomy Project (CGAP) uses serial analysis of gene expression (SAGE). Over 5 million transcript tags from more than 100 human cell types have been assembled. To enhance the utility of this data, the CGAP SAGE project created SAGE Genie, a web site for the analysis and presentation of SAGE data (http://cgap.nci.nih.gov/SAGE). SAGE Genie provides an automatic link between gene names and SAGE transcript levels, accounting for alternative transcription and many potential errors. These informatics advances provide a rapid and intuitive view of transcript expression in the human body or brain, displayed on the SAGE Anatomic Viewer. We report here an easily accessible view of nearly any gene's expression in a wide variety of malignant and normal tissues.

authors

Boon K,Osorio EC,Greenhut SF,Schaefer CF,Shoemaker J,Polyak K,Morin PJ,Buetow KH,Strausberg RL,De Souza SJ,Riggins GJ

doi

10.1073/pnas.152324199

keywords:

subject

Has Abstract

pub_date

2002-08-20 00:00:00

pages

11287-92

issue

17

eissn

0027-8424

issn

1091-6490

pii

152324199

journal_volume

99

pub_type

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