Measures of residue density in protein structures.

abstract：:High-resolution single nucleotide polymorphism genomic microarray (SNP-chip) is a useful tool to define gene dosage levels over the whole genome, allowing precise detection of deletions and duplications/amplifications of chromosomes in cancer cells. We found that this new technology can also identify breakpoints of ch...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kawamata N,Ogawa S,Zimmermann M,Niebuhr B,Stocking C,Sanada M,Hemminki K,Yamatomo G,Nannya Y,Koehler R,Flohr T,Miller CW,Harbott J,Ludwig WD,Stanulla M,Schrappe M,Bartram CR,Koeffler HP

更新日期：2008-08-19 00:00:00

abstract：:The constant heavy chain (CH1) domain affects antibody affinity and fine specificity, challenging the paradigm that only variable regions contribute to antigen binding. To investigate the role of the CH1 domain, we constructed IgA2 from the broadly neutralizing anti-HIV-1 2F5 IgG1, and compared 2F5 IgA2 and IgG bindin...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Tudor D,Yu H,Maupetit J,Drillet AS,Bouceba T,Schwartz-Cornil I,Lopalco L,Tuffery P,Bomsel M

更新日期：2012-07-31 00:00:00

abstract：:Plants balance their competing requirements for growth and stress tolerance via a sophisticated regulatory circuitry that controls responses to the external environments. We have identified a plant-specific gene, COST1 (constitutively stressed 1), that is required for normal plant growth but negatively regulates droug...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Bao Y,Song WM,Wang P,Yu X,Li B,Jiang C,Shiu SH,Zhang H,Bassham DC

更新日期：2020-03-31 00:00:00

abstract：:Certain cognitive functions differ in men and women, although the anatomical and functional substrates underlying these differences remain unknown. Because neocortical activity is directly related with higher brain function, numerous studies have focused on the cerebral cortex when searching for possible structural co...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Alonso-Nanclares L,Gonzalez-Soriano J,Rodriguez JR,DeFelipe J

更新日期：2008-09-23 00:00:00

abstract：:Patients with hematological malignancies can be successfully treated with HLA-matched T cell-depleted allogeneic stem cell transplantation (alloSCT) and subsequent donor lymphocyte infusions (DLIs). The efficacy of DLI is mediated by donor T cells recognizing minor histocompatibility antigens (mHags) on malignant reci...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Griffioen M,van der Meijden ED,Slager EH,Honders MW,Rutten CE,van Luxemburg-Heijs SA,von dem Borne PA,van Rood JJ,Willemze R,Falkenburg JH

更新日期：2008-03-11 00:00:00

abstract：:The DnaE intein in Synechocystis sp. strain PCC6803 is the first and only naturally split intein that has been identified so far. It is capable of catalyzing a protein trans-splicing mechanism to assemble a mature protein from two separate precursors. Therefore, it is a powerful tool for protein modification and engin...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Yang J,Fox GC Jr,Henry-Smith TV

更新日期：2003-03-18 00:00:00

abstract：:Five peptides corresponding to amino acid sequences predicted from all three reading frames of the nucleotide sequence of the third internal repeat array (IR3) of the Epstein-Barr virus (EBV) genome were synthesized chemically. All five peptides elicited antipeptide antibodies in rabbits. The antiserum raised against ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Dillner J,Sternås L,Kallin B,Alexander H,Ehlin-Henriksson B,Jörnvall H,Klein G,Lerner R

更新日期：1984-08-01 00:00:00

abstract：:A cDNA sequence coding for murine granulocyte colony-stimulating factor (G-CSF) has been isolated from a cDNA library prepared with mRNA derived from murine fibrosarcoma NFSA cells, which produce G-CSF constitutively. Identification of murine G-CSF cDNA was based on the cross-hybridization with human G-CSF cDNA under ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Tsuchiya M,Asano S,Kaziro Y,Nagata S

更新日期：1986-10-01 00:00:00

abstract：:Prototrophic hybrids formed from an adenine-requiring Chinese hamster cell and human fibroblasts uniformly display new esterase activity that differs from that of either parental cell in electrophoretic mobility and substrate specificity. The hybrids that grew in the selective medium and possessed the new esterase act...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kao FT,Puck TT

更新日期：1972-11-01 00:00:00

abstract：:Colloidal and sol-gel procedures have been used to prepare heterogeneous catalysts consisting of platinum metal particles with narrow size distributions and well defined shapes dispersed on high-surface-area silica supports. The overall procedure was developed in three stages. First, tetrahedral and cubic colloidal me...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lee I,Morales R,Albiter MA,Zaera F

更新日期：2008-10-07 00:00:00

abstract：:An oligomeric intermediate in the biosynthetic pathway of peptidoglycan was isolated from B. megaterium. The oligomer has been identified as [disaccharide(pentapeptide)]12 pyrophosphoryl undecaprenol. ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Fuchs-Cleveland E,Gilvarg C

更新日期：1976-11-01 00:00:00

abstract：:We have found a soluble cyclase, using for assay radioactively marked ATP as precursor. The reaction product was isolated by thin-layer chromatography and identified by specific degradation. After homogenization, part of the activity remained in the particulate fraction but could be easily extracted. The cyclase was c...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Tao M,Lipmann F

更新日期：1969-05-01 00:00:00

abstract：:A remarkable property of tetrapod bone is its ability to detect and remodel areas where damage has accumulated through prolonged use. This process, believed vital to the long-term health of bone, is considered to be initiated and orchestrated by osteocytes, cells within the bone matrix. It is therefore surprising that...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Atkins A,Dean MN,Habegger ML,Motta PJ,Ofer L,Repp F,Shipov A,Weiner S,Currey JD,Shahar R

更新日期：2014-11-11 00:00:00

abstract：:Tau is a highly soluble protein, yet it aggregates abnormally in Alzheimer's disease. Here, we address the question of proteolytic processing of tau and the nucleation of aggregates by tau fragments. We show in neuronal cell models that fragments of the repeat domain of tau containing mutations of FTDP17 (frontotempor...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Wang YP,Biernat J,Pickhardt M,Mandelkow E,Mandelkow EM

更新日期：2007-06-12 00:00:00

abstract：:Dense granular materials display a complicated set of flow properties, which differentiate them from ordinary fluids. Despite their ubiquity, no model has been developed that captures or predicts the complexities of granular flow, posing an obstacle in industrial and geophysical applications. Here we propose a 3D cons...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Henann DL,Kamrin K

更新日期：2013-04-23 00:00:00

abstract：:Relatively little is understood about the dynamics of global host-pathogen transcriptome changes that occur during bacterial infection of mucosal surfaces. To test the hypothesis that group A Streptococcus (GAS) infection of the oropharynx provokes a distinct host transcriptome response, we performed genome-wide trans...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Shea PR,Virtaneva K,Kupko JJ 3rd,Porcella SF,Barry WT,Wright FA,Kobayashi SD,Carmody A,Ireland RM,Sturdevant DE,Ricklefs SM,Babar I,Johnson CA,Graham MR,Gardner DJ,Bailey JR,Parnell MJ,Deleo FR,Musser JM

更新日期：2010-03-09 00:00:00

abstract：:We provide a framework for structural multiscale geometric organization of graphs and subsets of R(n). We use diffusion semigroups to generate multiscale geometries in order to organize and represent complex structures. We show that appropriately selected eigenfunctions or scaling functions of Markov matrices, which d...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Coifman RR,Lafon S,Lee AB,Maggioni M,Nadler B,Warner F,Zucker SW

更新日期：2005-05-24 00:00:00

abstract：:Mobile ectothermic animals can control their body temperatures by selecting specific thermal conditions in the environment, but embryos--trapped within an immobile egg and lacking locomotor structures--have been assumed to lack that ability. Falsifying that assumption, our experimental studies show that even early sta...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Du WG,Zhao B,Chen Y,Shine R

更新日期：2011-06-07 00:00:00

abstract：:Glutamate transporters clear synaptically released glutamate to maintain precise communication between neurons and limit glutamate neurotoxicity. Although much progress has been made on the topology, structure, and function of these carriers, few studies have addressed large-scale structural motions collectively assoc...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Jiang J,Shrivastava IH,Watts SD,Bahar I,Amara SG

更新日期：2011-09-13 00:00:00

abstract：:The neonatal Fc receptor for IgG (FcRn) is a distant member of the MHC class I protein family. It binds IgG and albumin in a pH-dependent manner and protects these from catabolism by diverting them from a degradative fate in lysosomes. In addition, FcRn-mediated IgG transport across epithelial barriers is responsible ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Qiao SW,Kobayashi K,Johansen FE,Sollid LM,Andersen JT,Milford E,Roopenian DC,Lencer WI,Blumberg RS

更新日期：2008-07-08 00:00:00

abstract：:Superresolution fluorescence microscopy overcomes the diffraction resolution barrier and allows the molecular intricacies of life to be revealed with greatly enhanced detail. However, many current superresolution techniques still face limitations and their implementation is typically associated with a steep learning c...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Dedecker P,Mo GC,Dertinger T,Zhang J

更新日期：2012-07-03 00:00:00

abstract：:Ascorbic acid metabolism is associated with a number of mechanisms known to be involved in host resistance to malignant disease. Cancer patients are significantly depleted of ascorbic acid, and in our opinion this demonstrable biochemical characteristic indicates a substantially increased requirement and utilization o...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cameron E,Pauling L

更新日期：1976-10-01 00:00:00

abstract：:Epstein-Barr virus-induced gene 3 (EBI3) is a widely expressed IL-12p40-related protein that associates as a heterodimer with either IL-12p35 or an IL-12p35 homologue, p28, to create a new cytokine (IL-27). To define the function of EBI3 in vivo, we generated knockout mice in which the ebi3 gene was targeted by homolo...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Nieuwenhuis EE,Neurath MF,Corazza N,Iijima H,Trgovcich J,Wirtz S,Glickman J,Bailey D,Yoshida M,Galle PR,Kronenberg M,Birkenbach M,Blumberg RS

更新日期：2002-12-24 00:00:00

abstract：:Increased DNA levels in centrally located endosperm nuclei are shown to be related to endosperm development in Zea mays. Mitotic activity sharply decreases in endosperm cells 10-12 days after pollination. At this time nuclear size and DNA content per nucleus (where C = haploid content) sharply increase until peak leve...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kowles RV,Phillips RL

更新日期：1985-10-01 00:00:00

abstract：:Intact DNA molecules extracted from HSV-1 (herpes simplex virus 1, human herpes virus 1) strain MP virions have a molecular weight of approximately 97 X 10(6), but cleavage with the HinIII restriction enzyme yields fourteen fragments with summed molecular weights of 160 X 10(6). Six "major" fragments occur once in eve...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hayward GS,Jacob RJ,Wadsworth SC,Roizman B

更新日期：1975-11-01 00:00:00

abstract：:Synaptic loss is the cardinal feature linking neuropathology to cognitive decline in Alzheimer's disease (AD). However, the mechanism of synaptic damage remains incompletely understood. Here, using FRET-based glutamate sensor imaging, we show that amyloid-β peptide (Aβ) engages α7 nicotinic acetylcholine receptors to ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Talantova M,Sanz-Blasco S,Zhang X,Xia P,Akhtar MW,Okamoto S,Dziewczapolski G,Nakamura T,Cao G,Pratt AE,Kang YJ,Tu S,Molokanova E,McKercher SR,Hires SA,Sason H,Stouffer DG,Buczynski MW,Solomon JP,Michael S,Powers E

更新日期：2013-07-02 00:00:00

abstract：:Infection of BALB/3T3 cells by polyoma virus causes an alteration in the cell surface, characterized by enhanced agglutination of the cells by wheat germ agglutinin or concanavalin A. Infection by the thermosensitive mutant of polyoma, ts-3, causes the cell surface alteration at the permissive temperature, but not at ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Eckhart W,Dulbecco R,Burger MM

更新日期：1971-02-01 00:00:00

abstract：:Ubiquitylation of proteins can be a signal for a variety of cellular processes beyond the classical role in proteolysis. The different signaling functions of ubiquitylation are thought to rely on ubiquitin-binding domains (UBDs). Several distinct UBD families are known, but their functions are not understood in detail...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Tyrrell A,Flick K,Kleiger G,Zhang H,Deshaies RJ,Kaiser P

更新日期：2010-11-16 00:00:00

abstract：:The rat anterior pituitary gland (AP) receives all of its blood supply via the hypophyseal portal circulation. We now report, in rats with estradiol (E2)-induced prolactin-secreting tumors, that newly formed arteries directly supply the AP and that this arteriogenesis is closely correlated with the sensitivity of two ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Elias KA,Weiner RI

更新日期：1984-07-01 00:00:00

abstract：:Coherent multidimensional electronic spectroscopy is commonly used to investigate photophysical phenomena such as light harvesting in photosynthesis in which the system returns back to its ground state after energy transfer. By contrast, we introduce multidimensional spectroscopy to study ultrafast photochemical proce...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ruetzel S,Diekmann M,Nuernberger P,Walter C,Engels B,Brixner T

更新日期：2014-04-01 00:00:00