Infant fungal communities: current knowledge and research opportunities.

Abstract:

:The microbes colonizing the infant gastrointestinal tract have been implicated in later-life disease states such as allergies and obesity. Recently, the medical research community has begun to realize that very early colonization events may be most impactful on future health, with the presence of key taxa required for proper immune and metabolic development. However, most studies to date have focused on bacterial colonization events and have left out fungi, a clinically important sub-population of the microbiota. A number of recent findings indicate the importance of host-associated fungi (the mycobiota) in adult and infant disease states, including acute infections, allergies, and metabolism, making characterization of early human mycobiota an important frontier of medical research. This review summarizes the current state of knowledge with a focus on factors influencing infant mycobiota development and associations between early fungal exposures and health outcomes. We also propose next steps for infant fungal mycobiome research, including longitudinal studies of mother-infant pairs while monitoring long-term health outcomes, further exploration of bacterium-fungus interactions, and improved methods and databases for mycobiome quantitation.

journal_name

BMC Med

journal_title

BMC medicine

authors

Ward TL,Knights D,Gale CA

doi

10.1186/s12916-017-0802-z

subject

Has Abstract

pub_date

2017-02-13 00:00:00

pages

30

issue

1

issn

1741-7015

pii

10.1186/s12916-017-0802-z

journal_volume

15

pub_type

杂志文章,评审
  • A method for inferring medical diagnoses from patient similarities.

    abstract:BACKGROUND:Clinical decision support systems assist physicians in interpreting complex patient data. However, they typically operate on a per-patient basis and do not exploit the extensive latent medical knowledge in electronic health records (EHRs). The emergence of large EHR systems offers the opportunity to integrat...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/1741-7015-11-194

    authors: Gottlieb A,Stein GY,Ruppin E,Altman RB,Sharan R

    更新日期:2013-09-02 00:00:00

  • Serum magnesium levels and risk of coronary artery disease: Mendelian randomisation study.

    abstract:BACKGROUND:Observational studies have shown that serum magnesium levels are inversely associated with risk of cardiovascular disease, but whether this association is causal is unknown. We conducted a Mendelian randomisation study to investigate whether serum magnesium levels may be causally associated with coronary art...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-018-1065-z

    authors: Larsson SC,Burgess S,Michaëlsson K

    更新日期:2018-05-17 00:00:00

  • Malaria eradication and elimination: views on how to translate a vision into reality.

    abstract::Although global efforts in the past decade have halved the number of deaths due to malaria, there are still an estimated 219 million cases of malaria a year, causing more than half a million deaths. In this forum article, we asked experts working in malaria research and control to discuss the ways in which malaria mig...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-015-0384-6

    authors: Tanner M,Greenwood B,Whitty CJ,Ansah EK,Price RN,Dondorp AM,von Seidlein L,Baird JK,Beeson JG,Fowkes FJ,Hemingway J,Marsh K,Osier F

    更新日期:2015-07-25 00:00:00

  • Application of real-time global media monitoring and 'derived questions' for enhancing communication by regulatory bodies: the case of human papillomavirus vaccines.

    abstract:BACKGROUND:The benefit-risk balance of vaccines is regularly debated by the public, but the utility of media monitoring for regulatory bodies is unclear. A media monitoring study was conducted at the European Medicines Agency (EMA) concerning human papillomavirus (HPV) vaccines during a European Union (EU) referral pro...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-017-0850-4

    authors: Bahri P,Fogd J,Morales D,Kurz X,ADVANCE consortium.

    更新日期:2017-05-02 00:00:00

  • Group-based developmental BMI trajectories, polycystic ovary syndrome, and gestational diabetes: a community-based longitudinal study.

    abstract:BACKGROUND:Obesity is common in young women, increasing insulin resistance (IR) and worsening pregnancy complications, including gestational diabetes (GDM). Women with polycystic ovary syndrome (PCOS) are commonly obese, which aggravates the severity of PCOS clinical expression. Relationships between these common insul...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-017-0957-7

    authors: Kakoly NS,Earnest A,Moran LJ,Teede HJ,Joham AE

    更新日期:2017-11-06 00:00:00

  • Chlamydia trachomatis transmission between the oropharynx, urethra and anorectum in men who have sex with men: a mathematical model.

    abstract:BACKGROUND:It has been presumed that Chlamydia trachomatis is transmitted between men only through anal or oral sex, but no mathematical models have tested this presumption. METHODS:To test this presumption, we created 20 compartmental mathematical models of different sexual practices that included both oral and anal ...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-020-01796-3

    authors: Xu X,Chow EPF,Ong JJ,Hoebe CJPA,Zou Z,Hocking JS,Fairley CK,Zhang L

    更新日期:2020-11-17 00:00:00

  • Comparative assessment of absolute cardiovascular disease risk characterization from non-laboratory-based risk assessment in South African populations.

    abstract:BACKGROUND:All rigorous primary cardiovascular disease (CVD) prevention guidelines recommend absolute CVD risk scores to identify high- and low-risk patients, but laboratory testing can be impractical in low- and middle-income countries. The purpose of this study was to compare the ranking performance of a simple, non-...

    journal_title:BMC medicine

    pub_type: 杂志文章,随机对照试验

    doi:10.1186/1741-7015-11-170

    authors: Gaziano TA,Pandya A,Steyn K,Levitt N,Mollentze W,Joubert G,Walsh CM,Motala AA,Kruger A,Schutte AE,Naidoo DP,Prakaschandra DR,Laubscher R

    更新日期:2013-07-24 00:00:00

  • Progress in adjuvant chemotherapy for breast cancer: an overview.

    abstract::Breast cancer is the most common cause of cancer and cancer death worldwide. Although most patients present with localized breast cancer and may be rendered disease-free with local therapy, distant recurrence is common and is the primary cause of death from the disease. Adjuvant systemic therapies are effective in red...

    journal_title:BMC medicine

    pub_type: 杂志文章,评审

    doi:10.1186/s12916-015-0439-8

    authors: Anampa J,Makower D,Sparano JA

    更新日期:2015-08-17 00:00:00

  • Fatty fish intake and cognitive function: FINS-KIDS, a randomized controlled trial in preschool children.

    abstract:BACKGROUND:Marine resources including fatty fish are important sources of n-3 long chain polyunsaturated fatty acids (n-3 LC-PUFAs), which are important for brain development. To our knowledge, this is the first randomized controlled trial (RCT) investigating the impact of fatty fish on cognition in preschool children....

    journal_title:BMC medicine

    pub_type: 杂志文章,随机对照试验

    doi:10.1186/s12916-018-1020-z

    authors: Øyen J,Kvestad I,Midtbø LK,Graff IE,Hysing M,Stormark KM,Markhus MW,Baste V,Frøyland L,Koletzko B,Demmelmair H,Dahl L,Lie Ø,Kjellevold M

    更新日期:2018-03-12 00:00:00

  • Lifestyle factors in preventing mental health disorders: an interview with Felice Jacka.

    abstract::In this video Q&A, we talk to Associate Professor Felice Jacka about population health approaches to the primary prevention of mental disorders across the lifespan. These include addressing lifestyle factors, such as diet, smoking and physical activity. Latest strategies are being developed through epidemiological stu...

    journal_title:BMC medicine

    pub_type: 面试

    doi:10.1186/s12916-015-0490-5

    authors: Jacka FN

    更新日期:2015-10-14 00:00:00

  • Hospital admissions in relation to body mass index in UK women: a prospective cohort study.

    abstract:BACKGROUND:Adiposity is associated with many adverse health outcomes but little direct evidence exists about its impact on the use of health care services. We aim to describe the relationship between body mass index (BMI) and rates of hospital admission in middle-aged UK women. METHODS:Among 1,251,619 Million Women St...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/1741-7015-12-45

    authors: Reeves GK,Balkwill A,Cairns BJ,Green J,Beral V,Million Women Study Collaborators.

    更新日期:2014-03-15 00:00:00

  • Collectives of diagnostic biomarkers identify high-risk subpopulations of hematuria patients: exploiting heterogeneity in large-scale biomarker data.

    abstract:BACKGROUND:Ineffective risk stratification can delay diagnosis of serious disease in patients with hematuria. We applied a systems biology approach to analyze clinical, demographic and biomarker measurements (n = 29) collected from 157 hematuric patients: 80 urothelial cancer (UC) and 77 controls with confounding patho...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/1741-7015-11-12

    authors: Emmert-Streib F,Abogunrin F,de Matos Simoes R,Duggan B,Ruddock MW,Reid CN,Roddy O,White L,O'Kane HF,O'Rourke D,Anderson NH,Nambirajan T,Williamson KE

    更新日期:2013-01-17 00:00:00

  • Age, sex, disease severity, and disease duration difference in placebo response: implications from a meta-analysis of diabetes mellitus.

    abstract:BACKGROUND:The placebo response in patients with diabetes mellitus is very common. A systematic evaluation needs to be updated with the current evidence about the placebo response in diabetes mellitus and the associated factors in clinical trials of anti-diabetic medicine. METHODS:Literature research was conducted in ...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-020-01787-4

    authors: Lin C,Cai X,Yang W,Lv F,Nie L,Ji L

    更新日期:2020-11-16 00:00:00

  • Renal function estimation and Cockroft-Gault formulas for predicting cardiovascular mortality in population-based, cardiovascular risk, heart failure and post-myocardial infarction cohorts: The Heart 'OMics' in AGEing (HOMAGE) and the high-risk myocardial

    abstract:BACKGROUND:Renal impairment is a major risk factor for mortality in various populations. Three formulas are frequently used to assess both glomerular filtration rate (eGFR) or creatinine clearance (CrCl) and mortality prediction: body surface area adjusted-Cockcroft-Gault (CG-BSA), Modification of Diet in Renal Disease...

    journal_title:BMC medicine

    pub_type: 杂志文章,随机对照试验

    doi:10.1186/s12916-016-0731-2

    authors: Ferreira JP,Girerd N,Pellicori P,Duarte K,Girerd S,Pfeffer MA,McMurray JJ,Pitt B,Dickstein K,Jacobs L,Staessen JA,Butler J,Latini R,Masson S,Mebazaa A,Rocca HP,Delles C,Heymans S,Sattar N,Jukema JW,Cleland JG,Za

    更新日期:2016-11-10 00:00:00

  • Advances in understanding ischemic acute kidney injury.

    abstract::Acute kidney injury (AKI) is independently associated with increased morbidity and mortality. Ischemia is the leading cause of AKI, and short of supportive measures, no currently available therapy can effectively treat or prevent ischemic AKI. This paper discusses recent developments in the understanding of ischemic A...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/1741-7015-9-11

    authors: Munshi R,Hsu C,Himmelfarb J

    更新日期:2011-02-02 00:00:00

  • Advances in immunotherapy for melanoma.

    abstract::In recent years, the introduction and Federal Drug Administration approval of immune checkpoint inhibitor antibodies has dramatically improved the clinical outcomes for patients with advanced melanoma. These antagonist monoclonal antibodies are capable of unleashing dormant or exhausted antitumor immunity, which has l...

    journal_title:BMC medicine

    pub_type: 杂志文章,评审

    doi:10.1186/s12916-016-0571-0

    authors: Redman JM,Gibney GT,Atkins MB

    更新日期:2016-02-06 00:00:00

  • Better management of multimorbidity: a critical look at the 'Ariadne principles'.

    abstract::Primary care clinicians and researchers are growing increasingly aware of the prevalence of multimorbidity among long-term conditions, and the impact on patient experience, health, and utilisation of care. The correspondence paper by Muth et al. entitled 'The Ariadne principles: how to handle multimorbidity in primary...

    journal_title:BMC medicine

    pub_type: 社论

    doi:10.1186/s12916-014-0222-2

    authors: Bower P

    更新日期:2014-12-08 00:00:00

  • Plasmodium falciparum dihydroartemisinin-piperaquine failures in Cambodia are associated with mutant K13 parasites presenting high survival rates in novel piperaquine in vitro assays: retrospective and prospective investigations.

    abstract:BACKGROUND:The declining efficacy of dihydroartemisinin-piperaquine against Plasmodium falciparum in Cambodia, along with increasing numbers of recrudescent cases, suggests resistance to both artemisinin and piperaquine. Available in vitro piperaquine susceptibility assays do not correlate with treatment outcome. A nov...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-015-0539-5

    authors: Duru V,Khim N,Leang R,Kim S,Domergue A,Kloeung N,Ke S,Chy S,Eam R,Khean C,Loch K,Ken M,Lek D,Beghain J,Ariey F,Guerin PJ,Huy R,Mercereau-Puijalon O,Witkowski B,Menard D

    更新日期:2015-12-22 00:00:00

  • The research burden of randomized controlled trial participation: a systematic thematic synthesis of qualitative evidence.

    abstract:BACKGROUND:Participation in randomized controlled trials (RCTs) may be quite demanding and could represent an important burden for patients. We aimed to explore this research burden (i.e., the psychological, physical, and financial burdens) experienced by patients through their participation in a RCT. METHODS:We condu...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-019-1476-5

    authors: Naidoo N,Nguyen VT,Ravaud P,Young B,Amiel P,Schanté D,Clarke M,Boutron I

    更新日期:2020-01-20 00:00:00

  • Large-scale external validation and comparison of prognostic models: an application to chronic obstructive pulmonary disease.

    abstract:BACKGROUND:External validations and comparisons of prognostic models or scores are a prerequisite for their use in routine clinical care but are lacking in most medical fields including chronic obstructive pulmonary disease (COPD). Our aim was to externally validate and concurrently compare prognostic scores for 3-year...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-018-1013-y

    authors: Guerra B,Haile SR,Lamprecht B,Ramírez AS,Martinez-Camblor P,Kaiser B,Alfageme I,Almagro P,Casanova C,Esteban-González C,Soler-Cataluña JJ,de-Torres JP,Miravitlles M,Celli BR,Marin JM,Ter Riet G,Sobradillo P,Lange P,Ga

    更新日期:2018-03-02 00:00:00

  • Risk of invasive breast cancer in relatives of patients with breast carcinoma in situ: a prospective cohort study.

    abstract:BACKGROUND:Wide implementation of mammography screening has resulted in increased numbers of women diagnosed with breast carcinoma in situ. We aimed to determine the risk of invasive breast cancer in relatives of patients with breast carcinoma in situ in comparison to the risk in relatives of patients with invasive bre...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-020-01772-x

    authors: Mukama T,Fallah M,Brenner H,Xu X,Sundquist K,Sundquist J,Kharazmi E

    更新日期:2020-11-05 00:00:00

  • Developing risk prediction models for type 2 diabetes: a systematic review of methodology and reporting.

    abstract:BACKGROUND:The World Health Organisation estimates that by 2030 there will be approximately 350 million people with type 2 diabetes. Associated with renal complications, heart disease, stroke and peripheral vascular disease, early identification of patients with undiagnosed type 2 diabetes or those at an increased risk...

    journal_title:BMC medicine

    pub_type: 杂志文章,评审

    doi:10.1186/1741-7015-9-103

    authors: Collins GS,Mallett S,Omar O,Yu LM

    更新日期:2011-09-08 00:00:00

  • Safety and tolerability of the antimicrobial peptide human lactoferrin 1-11 (hLF1-11).

    abstract:BACKGROUND:The treatment of patients with haematological malignancies by means of haematopoietic stem cell transplantation (HSCT) is often accompanied by life threatening infections. With emerging antimicrobial resistance there is an increased need for new agents, with a beneficial safety profile. Therefore we evaluate...

    journal_title:BMC medicine

    pub_type: 杂志文章,随机对照试验

    doi:10.1186/1741-7015-7-44

    authors: Velden WJ,van Iersel TM,Blijlevens NM,Donnelly JP

    更新日期:2009-09-08 00:00:00

  • Novel therapeutic strategies targeting HIV integrase.

    abstract::Integration of the viral genome into host cell chromatin is a pivotal and unique step in the replication cycle of retroviruses, including HIV. Inhibiting HIV replication by specifically blocking the viral integrase enzyme that mediates this step is an obvious and attractive therapeutic strategy. After concerted effort...

    journal_title:BMC medicine

    pub_type: 杂志文章,评审

    doi:10.1186/1741-7015-10-34

    authors: Quashie PK,Sloan RD,Wainberg MA

    更新日期:2012-04-12 00:00:00

  • Concordance between DSM-IV and DSM-5 criteria for delirium diagnosis in a pooled database of 768 prospectively evaluated patients using the delirium rating scale-revised-98.

    abstract:BACKGROUND:The Diagnostic and Statistical Manual fifth edition (DSM-5) provides new criteria for delirium diagnosis. We examined delirium diagnosis using these new criteria compared with the Diagnostic and Statistical Manual fourth edition (DSM-IV) in a large dataset of patients assessed for delirium and related presen...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-014-0164-8

    authors: Meagher DJ,Morandi A,Inouye SK,Ely W,Adamis D,Maclullich AJ,Rudolph JL,Neufeld K,Leonard M,Bellelli G,Davis D,Teodorczuk A,Kreisel S,Thomas C,Hasemann W,Timmons S,O'Regan N,Grover S,Jabbar F,Cullen W,Dunne C,Kam

    更新日期:2014-09-30 00:00:00

  • Delta-9 tetrahydrocannabinol (THC) inhibits lytic replication of gamma oncogenic herpesviruses in vitro.

    abstract:BACKGROUND:The major psychoactive cannabinoid compound of marijuana, delta-9 tetrahydrocannabinol (THC), has been shown to modulate immune responses and lymphocyte function. After primary infection the viral DNA genome of gamma herpesviruses persists in lymphoid cell nuclei in a latent episomal circular form. In respon...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/1741-7015-2-34

    authors: Medveczky MM,Sherwood TA,Klein TW,Friedman H,Medveczky PG

    更新日期:2004-09-15 00:00:00

  • Clinical evaluation of iron treatment efficiency among non-anemic but iron-deficient female blood donors: a randomized controlled trial.

    abstract:BACKGROUND:Iron deficiency without anemia is related to adverse symptoms that can be relieved by supplementation. Since a blood donation can induce such an iron deficiency, we investigated the clinical impact of iron treatment after a blood donation. METHODS:One week after donation, we randomly assigned 154 female don...

    journal_title:BMC medicine

    pub_type: 杂志文章,随机对照试验

    doi:10.1186/1741-7015-10-8

    authors: Waldvogel S,Pedrazzini B,Vaucher P,Bize R,Cornuz J,Tissot JD,Favrat B

    更新日期:2012-01-24 00:00:00

  • Hair regrowth in alopecia areata patients following Stem Cell Educator therapy.

    abstract:BACKGROUND:Alopecia areata (AA) is one of the most common autoimmune diseases and targets the hair follicles, with high impact on the quality of life and self-esteem of patients due to hair loss. Clinical management and outcomes are challenged by current limited immunosuppressive and immunomodulating regimens. METHODS...

    journal_title:BMC medicine

    pub_type: 杂志文章

    doi:10.1186/s12916-015-0331-6

    authors: Li Y,Yan B,Wang H,Li H,Li Q,Zhao D,Chen Y,Zhang Y,Li W,Zhang J,Wang S,Shen J,Li Y,Guindi E,Zhao Y

    更新日期:2015-04-20 00:00:00

  • Meta-analysis of the prognostic and clinical value of tumor-associated macrophages in adult classical Hodgkin lymphoma.

    abstract:BACKGROUND:The prognostic significance of tumor-associated macrophages (TAM) in adult classical Hodgkin lymphoma (cHL) remains controversial. Here, we report a meta-analysis of the association of CD68 and CD163 infiltration on the clinical outcome of adult cHL. METHODS:A comprehensive search to identify relevant artic...

    journal_title:BMC medicine

    pub_type: 杂志文章,meta分析

    doi:10.1186/s12916-016-0711-6

    authors: Guo B,Cen H,Tan X,Ke Q

    更新日期:2016-10-17 00:00:00

  • Vedolizumab trough level monitoring in inflammatory bowel disease: a state-of-the-art overview.

    abstract:BACKGROUND:Therapeutic drug monitoring involves therapeutic modifications based on the measurement of drug levels and antidrug antibodies. The viability of therapeutic drug monitoring in vedolizumab-treated patients with inflammatory bowel disease remains questioned. MAIN BODY:Accumulating evidence from clinical trial...

    journal_title:BMC medicine

    pub_type: 杂志文章,评审

    doi:10.1186/s12916-019-1323-8

    authors: Pouillon L,Vermeire S,Bossuyt P

    更新日期:2019-05-08 00:00:00