An antisense transcript in the human cytomegalovirus UL87 gene region.

Abstract:

BACKGROUND:Rapid advances in research on antisense transcripts are gradually changing our comprehension of genomic and gene expression aspects of the Herpesviridae. One such herpesvirus is the human cytomegalovirus (HCMV). Although transcription of the HCMV UL87 gene has not been specifically investigated, cDNA clones of UL87 antisense transcripts were found in HCMV cDNA libraries previously. In this study, the transcription of the UL87 antisense strand was investigated in three clinically isolated HCMV strains. RESULTS:First, an 800 nucleotides transcript having an antisense orientation to the UL87 gene was found in a late HCMV cDNA library. Then, the UL87 antisense transcript was confirmed by Rapid amplification of cDNA ends (RACE) and Northern blot in three HCMV clinical strains. Two ORFs were predicted in the antisense transcript. The putative protein of ORF 1 showed a high degree of conservation among HCMV and other CMV strains. CONCLUSION:An 800nt antisense transcript in the UL87 gene region exists in HCMV clinical strains.

journal_name

Virol J

journal_title

Virology journal

authors

Ma Y,Wang N,Li M,Gao S,Wang L,Ji Y,Qi Y,He R,Sun Z,Ruan Q

doi

10.1186/1743-422X-8-515

subject

Has Abstract

pub_date

2011-11-11 00:00:00

pages

515

issn

1743-422X

pii

1743-422X-8-515

journal_volume

8

pub_type

杂志文章
  • Occurrence of genetic modifications in core, 5'UTR and NS5b of HCV associated with viral response to treatment.

    abstract:BACKGROUND:It is becoming progressively more understandable that genetic variability of viruses is a major challenge in translating the laboratory findings to clinic. Genetic variability is the underlying cause of variant viral proteins which are not targetable by host immunological machinery. METHODS:500 patients wer...

    journal_title:Virology journal

    pub_type: 临床试验,杂志文章

    doi:10.1186/1743-422X-11-171

    authors: Kanwal S,Mahmood T

    更新日期:2014-09-30 00:00:00

  • Drug susceptibility to etravirine and darunavir among Human Immunodeficiency Virus Type 1-derived pseudoviruses in treatment-experienced patients with HIV/AIDS in South Korea.

    abstract:BACKGROUND:In South Korea, about 20 types of antiretroviral drugs are used in the treatment of patients with human immunodeficiency virus/acquired immune deficiency syndrome. Since 2010, raltegravir, etravirine, and darunavir have been spotlighted as new drugs for highly active antiretroviral therapy (HAART)-experience...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-015-0283-7

    authors: Kwon OK,Kim SS,Rhee JE,Kee MK,Park M,Oh HR,Choi JY

    更新日期:2015-04-09 00:00:00

  • HHV-6A in vitro infection of thyrocytes and T cells alters the expression of miRNA associated to autoimmune thyroiditis.

    abstract:BACKGROUND:Human herpesviruses have been hypothesized as environmental triggers in the development of autoimmune thyroid diseases (AITD), and in particular active human herpesvirus 6A (HHV-6A) infection was detected in thyrocytes of Hashimoto's thyroiditis (HT) patients, who also show specific anti-viral immune respons...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-016-0672-6

    authors: Caselli E,D'Accolti M,Soffritti I,Zatelli MC,Rossi R,Degli Uberti E,Di Luca D

    更新日期:2017-01-11 00:00:00

  • Identification of novel human adenovirus candidates using the coxsackievirus and adenovirus receptor for cell entry.

    abstract:BACKGROUND:There are over 100 known human adenovirus (HAdV) types, which are able to cause a broad variety of different self-limiting but also lethal diseases especially in immunocompromised patients. Only limited information about the pathogenesis and biology of the majority of these virus types is available. In the p...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-020-01318-w

    authors: Mese K,Bunz O,Schellhorn S,Volkwein W,Jung D,Gao J,Zhang W,Baiker A,Ehrhardt A

    更新日期:2020-04-09 00:00:00

  • Expression of Ebolavirus glycoprotein on the target cells enhances viral entry.

    abstract:BACKGROUND:Entry of Ebolavirus to the target cells is mediated by the viral glycoprotein GP. The native GP exists as a homotrimer on the virions and contains two subunits, a surface subunit (GP1) that is involved in receptor binding and a transmembrane subunit (GP2) that mediates the virus-host membrane fusion. Previou...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-6-75

    authors: Manicassamy B,Rong L

    更新日期:2009-06-08 00:00:00

  • Phylogenetic analysis of Torque Teno Virus genome from Pakistani isolate and incidence of co-infection among HBV/HCV infected patients.

    abstract:BACKGROUND:Torque Teno Virus (TTV) was the first single stranded circular DNA virus to be discovered that infects humans. Although there have been numerous reports regarding the prevalence of TTV from other countries of South Asia, there is severe lack of information regarding its prevalence in Pakistan. Thus the prese...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-9-320

    authors: Hussain T,Manzoor S,Waheed Y,Tariq H,Hanif K

    更新日期:2012-12-28 00:00:00

  • Plant-derived antivirals against hepatitis c virus infection.

    abstract::Hepatitis C virus (HCV) infection is a worldwide public health burden and it is estimated that 185 million people are or have previously been infected worldwide. There is no effective vaccine for prevention of HCV infection; however, a number of drugs are available for the treatment of infection. The availability of d...

    journal_title:Virology journal

    pub_type: 杂志文章,评审

    doi:10.1186/s12985-018-0945-3

    authors: Jardim ACG,Shimizu JF,Rahal P,Harris M

    更新日期:2018-02-13 00:00:00

  • Analysis of the 5'UTR of HCV genotype 3 grown in vitro in human B cells, T cells, and macrophages.

    abstract:BACKGROUND:Previously, we have reported the isolation and molecular characterization of human Hepatitis C virus genotype 1 (HCV-1) from infected patients. We are now reporting an analysis of HCV obtained from patients infected with HCV genotype 3 (HCV-3) as diagnosed by clinical laboratories. RESULTS:HCV was cultured ...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-7-155

    authors: Revie D,Alberti MO,Prichard JG,Kelley AS,Salahuddin SZ

    更新日期:2010-07-13 00:00:00

  • Bat origin of human coronaviruses.

    abstract::Bats have been recognized as the natural reservoirs of a large variety of viruses. Special attention has been paid to bat coronaviruses as the two emerging coronaviruses which have caused unexpected human disease outbreaks in the 21st century, Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) and Middle East Re...

    journal_title:Virology journal

    pub_type: 杂志文章,评审

    doi:10.1186/s12985-015-0422-1

    authors: Hu B,Ge X,Wang LF,Shi Z

    更新日期:2015-12-22 00:00:00

  • A simplified in vitro ligation approach to clone an E1B55k-deleted double-targeted conditionally-replicative adenovirus.

    abstract:BACKGROUND:Construction of conditionally-replicative Adenovirus (CRAd) is complex and time-consuming. While homologous recombination (HR) using a two-plasmid system in bacteria is commonly used to generate CRAds, alternative methods may be required when HR fails. Previously, in vitro ligation has been suggested to faci...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-6-18

    authors: Haviv YS

    更新日期:2009-02-07 00:00:00

  • Isolation of a novel Rhabdovirus from an insectivorous bat (Pipistrellus kuhlii) in Italy.

    abstract:BACKGROUND:Rhabdoviridae is one of the most ecologically diverse families of RNA viruses which can infect a wide range of vertebrates and invertebrates. Bats, among mammals, are pointed to harbor a significantly higher proportion of unknown or emerging viruses with zoonotic potential. Herein, we report the isolation of...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-018-0949-z

    authors: Lelli D,Prosperi A,Moreno A,Chiapponi C,Gibellini AM,De Benedictis P,Leopardi S,Sozzi E,Lavazza A

    更新日期:2018-02-17 00:00:00

  • The relationship between human leukocyte antigen-DP/DQ gene polymorphisms and the outcomes of HCV infection in a Chinese population.

    abstract:BACKGROUND:Recently, human leukocyte antigen (HLA) class-II gene polymorphisms have been reported to be related to Hepatitis C virus (HCV) infection and chronicity. The objective of this study was to explore the relationship of HLA-DP rs9277535 and HLA-DQ rs7453920 with the outcomes of HCV infection. METHODS:The rs927...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-017-0901-7

    authors: Huang P,Fan H,Tian T,Liao P,Li J,Yu R,Xia X,Feng Y,Wang J,Liu Y,Zhang Y,Yue M

    更新日期:2017-12-06 00:00:00

  • Capsid display of a conserved human papillomavirus L2 peptide in the adenovirus 5 hexon protein: a candidate prophylactic hpv vaccine approach.

    abstract:BACKGROUND:Infection by any one of 15 high risk human papillomavirus (hrHPV) types causes most invasive cervical cancers. Their oncogenic genome is encapsidated by L1 (major) and L2 (minor) coat proteins. Current HPV prophylactic vaccines are composed of L1 virus-like particles (VLP) that elicit type restricted immunit...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-015-0364-7

    authors: Wu WH,Alkutkar T,Karanam B,Roden RB,Ketner G,Ibeanu OA

    更新日期:2015-09-11 00:00:00

  • The new temperature-sensitive mutation PA-F35S for developing recombinant avian live attenuated H5N1 influenza vaccine.

    abstract:BACKGROUND:H5N1 highly pathogenic avian influenza virus (HPAIV) is continuously circulating in many Asian countries and threatening poultry industry and human population. Vaccination is the best strategy to control H5N1 HPAIV infection in poultry and transmission to human population. The aim of this study is to identif...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-9-97

    authors: Zhang W,Tu J,Zhao Z,Chen H,Jin M

    更新日期:2012-05-23 00:00:00

  • Potential effects of telbivudine and entecavir on renal function: a systematic review and meta-analysis.

    abstract:BACKGROUND:To assess the potential effects of telbivudine (LdT) and entecavir (ETV) on renal function in patients with chronic hepatitis B (CHB), we performed a meta-analysis of the relevant data available on these agents to evaluate their effects on the estimated glomerular filtration rate (eGFR) during treatment. ME...

    journal_title:Virology journal

    pub_type: 杂志文章,meta分析,评审

    doi:10.1186/s12985-016-0522-6

    authors: Wu X,Cai S,Li Z,Zheng C,Xue X,Zeng J,Peng J

    更新日期:2016-04-09 00:00:00

  • Molecular characterization of echovirus 30-associated outbreak of aseptic meningitis in Guangdong in 2012.

    abstract:BACKGROUND:Evaluation of the primary etiologic agents that cause aseptic meningitis outbreaks may provide valuable information regarding the prevention and management of aseptic meningitis. An outbreak of aseptic meningitis occurred from May to June, 2012, in Guangdong Province, China. In order to determine the etiolog...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-10-263

    authors: Xiao H,Guan D,Chen R,Chen P,Monagin C,Li W,Su J,Ma C,Zhang W,Ke C

    更新日期:2013-08-23 00:00:00

  • Global phylogenetic analysis of contemporary aleutian mink disease viruses (AMDVs).

    abstract:BACKGROUND:Aleutian mink disease has major economic consequences on the mink farming industry worldwide, as it causes a disease that affects both the fur quality and the health and welfare of the mink. The virus causing this disease is a single-stranded DNA virus of the genus Amdoparvovirus belonging to the family of P...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-017-0898-y

    authors: Ryt-Hansen P,Hagberg EE,Chriél M,Struve T,Pedersen AG,Larsen LE,Hjulsager CK

    更新日期:2017-11-22 00:00:00

  • A gel-based PCR method to differentiate sheeppox virus field isolates from vaccine strains.

    abstract:BACKGROUND:Sheeppox (SPP) and goatpox (GTP) caused by sheeppox virus (SPPV) and goatpox virus (GTPV), respectively of the genus Capripoxvirus in the family Poxviridae, are severely afflicting small ruminants' production systems in Africa and Asia. In endemic areas, SPP and GTP are controlled using vaccination with live...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-018-0969-8

    authors: Chibssa TR,Grabherr R,Loitsch A,Settypalli TBK,Tuppurainen E,Nwankpa N,Tounkara K,Madani H,Omani A,Diop M,Cattoli G,Diallo A,Lamien CE

    更新日期:2018-04-02 00:00:00

  • New Vibrio cholerae O1 biotype ElTor bacteriophages.

    abstract::We report the presence of three new O1 ElTor vibriophages named AS1, AS2 and AS3, isolated from the sewage and pond waters of the outskirts of Kolkata. A few phages, named AS4, with hexagonal heads and abnormally long tails with typical curly projections were also found in the water samples. ...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-2-28

    authors: Sen A,Ghosh AN

    更新日期:2005-04-11 00:00:00

  • Geminivirus mixed infection on pepper plants: synergistic interaction between PHYVV and PepGMV.

    abstract:BACKGROUND:PHYVV and PepGMV are plant viruses reported in Mexico and Southern US as causal agents of an important pepper disease known as "rizado amarillo". Mixed infections with PHYVV and PepGMV have been reported in several hosts over a wide geographic area. Previous work suggested that these viruses might interact a...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-8-104

    authors: Rentería-Canett I,Xoconostle-Cázares B,Ruiz-Medrano R,Rivera-Bustamante RF

    更新日期:2011-03-08 00:00:00

  • A predominance of R5-like HIV genotypes in vaginal secretions is associated with elevated plasma HIV-1 RNA levels and the absence of anti-retroviral therapy.

    abstract::HIV expressed in genital secretions provides the inoculum from which transmitting variants are selected, both in sexual transmission and mother-to-infant transmission during partuition. Characterization of HIV levels and genotypes found in vaginal secretions and the impact of anti-retroviral therapy (ART) on this viru...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-5-87

    authors: Randolph TC,Kissinger PJ,Clark RA,Lacour N,Amedee AM

    更新日期:2008-07-29 00:00:00

  • Matrix-M™ adjuvation broadens protection induced by seasonal trivalent virosomal influenza vaccine.

    abstract:BACKGROUND:Influenza virus infections are responsible for significant morbidity worldwide and therefore it remains a high priority to develop more broadly protective vaccines. Adjuvation of current seasonal influenza vaccines has the potential to achieve this goal. METHODS:To assess the immune potentiating properties ...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-015-0435-9

    authors: Cox F,Saeland E,Baart M,Koldijk M,Tolboom J,Dekking L,Koudstaal W,Lövgren Bengtsson K,Goudsmit J,Radošević K

    更新日期:2015-12-08 00:00:00

  • Reduction of the survival time of pig xenotransplants by porcine cytomegalovirus.

    abstract:BACKGROUND:Xenotransplantation using pig cells, tissues and organs may help to overcome the shortage of human tissues and organs for the treatment of tissue and organ failure. Progress in the prevention of immunological rejection using genetically modified pigs and new, more effective, immunosuppression regimens will a...

    journal_title:Virology journal

    pub_type: 杂志文章,评审

    doi:10.1186/s12985-018-1088-2

    authors: Denner J

    更新日期:2018-11-08 00:00:00

  • Transient expression of homologous hairpin RNA interferes with PVY transmission by aphids.

    abstract::Hairpin RNAs have been used to confer resistance to viruses in plants through RNA silencing. However, it has not been demonstrated that RNA silencing was effective against inoculation by aphids of non-persistently transmitted viruses, the major route of plant virus spread in nature. As a proof-of-principle strategy, w...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-5-42

    authors: Vargas M,Martínez-García B,Díaz-Ruíz JR,Tenllado F

    更新日期:2008-03-19 00:00:00

  • A dual function TAR Decoy serves as an anti-HIV siRNA delivery vehicle.

    abstract::The TAR RNA of HIV was engineered as an siRNA delivery vehicle to develop a combinatorial therapeutic approach. The TAR backbone was found to be a versatile backbone for expressing siRNAs. Upon expression in human cells, pronounced and specific inhibition of reporter gene expression was observed with TARmiR. The resul...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-7-33

    authors: Unwalla HJ,Rossi JJ

    更新日期:2010-02-10 00:00:00

  • Clinical validation of REALQUALITY RQ-HPV Screen according to the international guidelines for human papillomavirus DNA test requirements for cervical screening.

    abstract:BACKGROUND:According to international guidelines, HPV DNA tests represent a valid alternative to Pap Test for primary cervical cancer screening, provided that they guarantee balanced clinical sensitivity and specificity for cervical intraepithelial neoplasia grade 2 or more severe lesions. The aim of this study was to ...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/s12985-018-0965-z

    authors: Iacobellis M,Violante C,Notarachille G,Simone A,Scarfì R,Giuffrè G

    更新日期:2018-03-20 00:00:00

  • Development and validation of a prokaryotically expressed foot-and-mouth disease virus non-structural protein 2C'3AB-based immunochromatographic strip to differentiate between infected and vaccinated animals.

    abstract:BACKGROUND:Foot-and-mouth disease (FMD) is an extremely contagious viral disease of cattle, pigs, sheep, goats, and many cloven-hoofed wild animals. FMDV serotypes O and Asia 1 have circulated separately in China during the last fifty years, and eliminating infected animals and vaccination are the main policies to prev...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-8-186

    authors: Wu L,Jiang T,Lu ZJ,Yang YM,Sun P,Liang Z,Li D,Fu YF,Cao YM,Liu XT,Liu ZX

    更新日期:2011-04-23 00:00:00

  • Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene.

    abstract::A TaqMan-based real-time polymerase chain reaction (PCR) assay was devised for the detection of porcine parvovirus (PPV). Two primers and a TaqMan probe for the non-structural protein NS1 gene were designed. The detection limit was 1 x 10² DNA copies/μL, and the assay was linear in the range of 1 x 10² to 1 x 10⁹ copi...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-7-353

    authors: Song C,Zhu C,Zhang C,Cui S

    更新日期:2010-12-02 00:00:00

  • HPV prevalence and type distribution in women with or without cervical lesions in the Northeast region of Romania.

    abstract:BACKGROUND:Cervical cancer is a major public health problem worldwide. While Romania has the highest incidence of cervical cancer in Europe, the prevalence of HPV has not been evaluated. We report the first data on HPV prevalence and type distribution in Northeast Romania. METHODS:HPV prevalence and genotype distribut...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-8-558

    authors: Ursu RG,Onofriescu M,Nemescu D,Iancu LS

    更新日期:2011-12-22 00:00:00

  • Use of cracked maize as a carrier for NDV4 vaccine in experimental vaccination of chickens.

    abstract::The suitability of V4 vaccine coated on cracked local grain (maize) and its husks and used for oral vaccination of chickens was assessed. Seventy-two (72) birds aged three (3) weeks and above were divided into six groups of twelve (12) birds per group. The birds were bled to determine their prevaccination HI antibody ...

    journal_title:Virology journal

    pub_type: 杂志文章

    doi:10.1186/1743-422X-7-67

    authors: Olabode AO,Ndako JA,Echeonwu GO,Nwankiti OO,Chukwuedo AA

    更新日期:2010-03-23 00:00:00