Four-state models and regulation of contraction of smooth muscle. I. Physical considerations, stability, and solutions.

Abstract:

:Cyclic four-state models are frequently used in biology to represent a variety of molecular behaviors. A common experimental strategy to test such models is to follow the behavior of the real system after some of the rate constants are changed in a stepwise manner. We analyze the mathematical behavior of a simple example of such a model applicable to the regulation of contraction of smooth muscle, but our results apply in general to any linear, cyclic four-state model. We discuss detailed balance and requirements for linearity. We find that the only way to have sustained oscillations is for the rate constants of the model to be themselves oscillatory. We state conditions for decaying oscillations and find that in models that do not follow strictly first-order kinetics and do not satisfy detailed balance, these conditions can hold. We show analytically that the response of any state to step changes in the rate constants is the sum of three weighted exponentials plus a constant term, the steady-state value. We provide explicit expressions for the time dependence of all state variables. We discuss a simple way to use these results to obtain numerical solutions in cases where the rate constants change in an arbitrary way.

journal_name

Math Biosci

journal_title

Mathematical biosciences

authors

Lazalde CA,Barr L

doi

10.1016/0025-5564(92)90086-c

subject

Has Abstract

pub_date

1992-11-01 00:00:00

pages

1-30

issue

1

eissn

0025-5564

issn

1879-3134

pii

0025-5564(92)90086-C

journal_volume

112

pub_type

杂志文章
  • Random and non-random mating populations: Evolutionary dynamics in meiotic drive.

    abstract::Game theoretic tools are utilized to analyze a one-locus continuous selection model of sex-specific meiotic drive by considering nonequivalence of the viabilities of reciprocal heterozygotes that might be noticed at an imprinted locus. The model draws attention to the role of viability selections of different types to...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2015.10.013

    authors: Sarkar B

    更新日期:2016-01-01 00:00:00

  • Crossover in spreading behavior due to memory in population dynamics.

    abstract::The reaction-diffusion equation is one of the possible ways for modeling animal movement, where the reactive part stands for the population growth and the diffusive part for random dispersal of the population. However, a reaction-diffusion model may not represent all aspects of the spatial dynamics, because of the exi...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2020.108346

    authors: Oliveira KA,Berbert JM

    更新日期:2020-06-01 00:00:00

  • Coding of information in models of tuberous electroreceptors.

    abstract::Weakly electric fish continuously emit a quasi-sinusoidal electric organ discharge (EOD) to probe their near environment (electrolocation). P-type tuberous receptors located on their skin respond to amplitude modulations of the EOD by varying their firing rate. These receptors, and the neuronal circuitry downstream fr...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2003.08.012

    authors: St-Hilaire M,Longtin A

    更新日期:2004-03-01 00:00:00

  • Theory of the locomotion of nematodes: control of the somatic motor neurons by interneurons.

    abstract::The only animal of which the complete neural circuitry is known at the submicroscopical level is the nematode Caenorhabditis elegans. This anatomical knowledge is complemented by functional insight from electrophysiological experiments in the related nematode Ascaris lumbricoides, which show that Ascaris motor neurons...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/0025-5564(93)90033-7

    authors: Niebur E,Erdös P

    更新日期:1993-11-01 00:00:00

  • Optimal control of tumor size used to maximize survival time when cells are resistant to chemotherapy.

    abstract::The high failure rates encountered in the chemotherapy of some cancers suggest that drug resistance is a common phenomenon. In the current study, the tumor burden during therapy is used to slow the growth of the drug-resistant cells, thereby maximizing the survival time of the host. Three types of tumor growth model a...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/0025-5564(92)90038-x

    authors: Martin RB,Fisher ME,Minchin RF,Teo KL

    更新日期:1992-07-01 00:00:00

  • Prostate cancer: progression of prostate-specific antigen after external beam irradiation.

    abstract::This paper is concerned with the development of a stochastic path of prostate-specific antigen (PSA) level after radiation treatment for prostate cancer. PSA is a biomarker for prostate cancer, higher levels of which indicate the seriousness of the cancer progression. Following the deterministic modeling of the data b...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/s0025-5564(02)00215-8

    authors: Dayananda PW,Taylor JM,Whiting DG

    更新日期:2003-04-01 00:00:00

  • CXCR4 and CCR5 regulation and expression patterns on T- and monocyte-macrophage cell lineages: implications for susceptibility to infection by HIV-1.

    abstract::Chemokine receptor expression may vary dramatically among cell subsets. Therefore, the stage of differentiation and the lineage of CD4 cells may profoundly affect their susceptibility to infection by human immunodeficiency virus type 1 (HIV-1). However, the mechanisms of coreceptor competition for association with HIV...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2005.01.002

    authors: Joly M,Pinto JM

    更新日期:2005-05-01 00:00:00

  • Evaluating spread of invaders from gravity scores--a way of using gravity models in ecology.

    abstract::This study is a theoretical excursion into gravity models and their usability in evaluating importance of spatial structure and population development for the spread of colonizing organisms. A so called "gravity score" for sites is deduced, and such a score could be used for predicting risk of colonization once one si...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2009.08.008

    authors: Järemo J

    更新日期:2009-11-01 00:00:00

  • Time delay in physiological systems: analyzing and modeling its impact.

    abstract::This article examines the functional and clinical impact of time delays that arise in human physiological systems, especially control systems. An overview of the mathematical and physiological contexts for considering time delays will be illustrated, from the system level to cell level, by examining models that incorp...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章,评审

    doi:10.1016/j.mbs.2011.08.006

    authors: Batzel JJ,Kappel F

    更新日期:2011-12-01 00:00:00

  • An epidemiological model for direct and indirect transmission of typhoid fever.

    abstract::The modified SIS epidemiological model considers the usual direct transmission (short cycle) and indirect transmission (long cycle) of typhoid fever. Thresholds are determined, and the equilibrium points are shown to be globally stable. Local stability of the equilibrium points is shown in the corresponding model with...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/0025-5564(89)90081-3

    authors: González-Guzmán J

    更新日期:1989-09-01 00:00:00

  • Dynamics of vaccination in a time-delayed epidemic model with awareness.

    abstract::This paper investigates the effects of vaccination on the dynamics of infectious disease, which is spreading in a population concurrently with awareness. The model considers contributions to the overall awareness from a global information campaign, direct contacts between unaware and aware individuals, and reported ca...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2017.09.007

    authors: Agaba GO,Kyrychko YN,Blyuss KB

    更新日期:2017-12-01 00:00:00

  • A comparison of different bivariate correlated frailty models and estimation strategies.

    abstract::Frailty models are becoming increasingly popular in multivariate survival analysis. Shared frailty models in particular are often used despite their limitations. To overcome their disadvantages numerous correlated frailty models were established during the last decade. In the present study, we examine bivariate correl...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2004.11.010

    authors: Wienke A,Arbeev KG,Locatelli I,Yashin AI

    更新日期:2005-11-01 00:00:00

  • Mean and quasideterministic equivalence for linear stochastic dynamics.

    abstract::In linear, stochastic dynamics it is shown that the quasideterministic population size is equivalent to the mean population size. The quasideterministic dynamics are defined by the conditional infinitesimal mean of the process. The stochastic component of the dynamics includes both Gaussian and Poisson white noise, wi...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/0025-5564(89)90010-2

    authors: Hanson FB,Ryan D

    更新日期:1989-03-01 00:00:00

  • Inferring ancestral sequences in taxon-rich phylogenies.

    abstract::Statistical consistency in phylogenetics has traditionally referred to the accuracy of estimating phylogenetic parameters for a fixed number of species as we increase the number of characters. However, it is also useful to consider a dual type of statistical consistency where we increase the number of species, rather ...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2010.07.002

    authors: Gascuel O,Steel M

    更新日期:2010-10-01 00:00:00

  • Modelling the role of CtfA/B in reverse shift continuous culture experiments of Clostridium acetobutylicum.

    abstract::In continuous phosphate-limited conditions, under pH control from high pH (pH ≳ 5.2) to low pH (pH ≲ 5.2), the metabolism of the Gram-positive bacterium Clostridium acetobutylicum,switches from acid to solvent production. Three main enzymes are responsible for the shift, acetoacetate decarboxylase (Adc), alcohol dehyd...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2016.03.003

    authors: Thorn GJ,King JR

    更新日期:2016-06-01 00:00:00

  • A stochastic mover/stayer model for an HIV epidemic.

    abstract::A multicompartmental model is proposed to deal with the spread of the HIV epidemic. Stratification with respect to high- and low-risk groups is taken into account, introducing a "fuzzy" decomposition of the compartment of susceptibles. The infectivity period is staged using different levels of CD4 cell counts. Asympto...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/0025-5564(91)90021-a

    authors: Rossi C

    更新日期:1991-12-01 00:00:00

  • Equilibrium distributions and simulation methods for age structured populations.

    abstract::A simulation method is presented for the demographic and genetic variation of age structured haploid populations. First, we use matrix analytic methods to derive an equilibrium distribution for the age class sizes conditioned on the total population size. Knowledge of this distribution eliminates the need of a burn-in...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2015.08.003

    authors: Olsson F,Hössjer O

    更新日期:2015-10-01 00:00:00

  • Model parameter uncertainties in a dual-species biofilm competition model affect ecological output parameters much stronger than morphological ones.

    abstract::Bacterial biofilms are complex microbial depositions on immersed interfaces that form wherever the environmental conditions sustain microbial growth. Despite their name, biofilms can develop in highly irregular structures. Recently several mathematical concepts have been introduced to model these spatially structured ...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2011.05.006

    authors: Muhammad N,Eberl HJ

    更新日期:2011-09-01 00:00:00

  • A class of phylogenetic networks reconstructable from ancestral profiles.

    abstract::Rooted phylogenetic networks provide an explicit representation of the evolutionary history of a set X of sampled species. In contrast to phylogenetic trees which show only speciation events, networks can also accommodate reticulate processes (for example, hybrid evolution, endosymbiosis, and lateral gene transfer). A...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2019.04.009

    authors: Erdős PL,Semple C,Steel M

    更新日期:2019-07-01 00:00:00

  • Spreading speeds as slowest wave speeds for cooperative systems.

    abstract::It is well known that in many scalar models for the spread of a fitter phenotype or species into the territory of a less fit one, the asymptotic spreading speed can be characterized as the lowest speed of a suitable family of traveling waves of the model. Despite a general belief that multi-species (vector) models hav...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2005.03.008

    authors: Li B,Weinberger HF,Lewis MA

    更新日期:2005-07-01 00:00:00

  • Theoretical analysis of lethal factors in plant populations.

    abstract::In this article, we are interested in the problem of the existence of a few linkage groups in which lethal infertile genes associated with yield factors are present. This hypothesis is supported by the finding of natural balanced lethal systems, which keep a short heterotic chromosome segment. It is very important to ...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/s0025-5564(96)00132-0

    authors: Ronceros RB,Sorarrain O,Salerno JC,Favret EA

    更新日期:1997-03-01 00:00:00

  • A switching control law approach for cancer immunotherapy of an evolutionary tumor growth model.

    abstract::We propose a new approach for tumor immunotherapy which is based on a switching control strategy defined on domains of attraction of equilibria of interest. For this, we consider a recently derived model which captures the effects of the tumor cells on the immune system and viceversa, through predator-prey competition...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2016.09.008

    authors: Doban AI,Lazar M

    更新日期:2017-02-01 00:00:00

  • Numerical solution of inward solidification of a dilute ternary solution towards a semi-permeable spherical cell.

    abstract::Modeling a cell's response to encroaching ice has informed the development of cryopreservation protocols for four decades. It has been well documented that knowledge of the cellular state as a function of media and cooling rate faciliate informed cryopreservation protocol design and explain mechanisms of damage. Howev...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2019.108240

    authors: Anderson DM,Benson JD,Kearsley AJ

    更新日期:2019-10-01 00:00:00

  • Inference of cell-cell interactions from population density characteristics and cell trajectories on static and growing domains.

    abstract::A key feature of cell migration is how cell movement is affected by cell-cell interactions. Furthermore, many cell migratory processes such as neural crest stem cell migration [Thomas and Erickson, 2008; McLennan et al., 2012] occur on growing domains or in the presence of a chemoattractant. Therefore, it is important...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2015.04.002

    authors: Ross RJ,Yates CA,Baker RE

    更新日期:2015-06-01 00:00:00

  • Kinetics of the formation of a protein corona around nanoparticles.

    abstract::Interaction of metal or oxide nanoparticles (NPs) with biological soft matter is one of the central phenomena in basic and applied biology-oriented nanoscience. Often, this interaction includes adsorption of suspended proteins on the NP surface, resulting in the formation of the protein corona around NPs. Structurally...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2016.09.018

    authors: Zhdanov VP,Cho NJ

    更新日期:2016-12-01 00:00:00

  • Mathematical modeling of cancer radiovirotherapy.

    abstract::Cancer virotherapy represents a dynamical system that requires mathematical modeling for complete understanding of the outcomes. The combination of virotherapy with radiation (radiovirotherapy) has been recently shown to successfully eliminate tumors when virotherapy alone failed. However, it introduces a new level of...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2005.11.001

    authors: Dingli D,Cascino MD,Josić K,Russell SJ,Bajzer Z

    更新日期:2006-01-01 00:00:00

  • Generalised probability mass function for the final epidemic size of an SIR model on a line of triangles network.

    abstract::We explore the feasibility of deriving generalised expressions for the probability mass function (PMF) of the final epidemic size of a Susceptible - Infected - Recovered (SIR) model on a finite network of an arbitrary number of nodes. Expressions for the probability that the infection progresses along a given pathway ...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2019.02.003

    authors: McCulloch K,Roberts MG,Laing CR

    更新日期:2019-05-01 00:00:00

  • A comprehensive mathematical framework for modeling intestinal smooth muscle cell contraction with applications to intestinal edema.

    abstract::The contraction of intestinal smooth muscle cells (ISMCs) involves many coordinated biochemical and mechanical processes. In this work, we present a framework for modeling ISMC contractility that begins with chemical models of calcium dynamics, continues with myosin light chain phosphorylation and force generation, an...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2014.12.009

    authors: Young J,Ozisik S,Riviere B,Shamim M

    更新日期:2015-04-01 00:00:00

  • Prediction of aptamer-protein interacting pairs based on sparse autoencoder feature extraction and an ensemble classifier.

    abstract::Aptamer-protein interacting pairs play important roles in physiological functions and structural characterization. Identifying aptamer-protein interacting pairs is challenging and limited, despite of the tremendous applications of aptamers. Therefore, it is vital to construct a high prediction performance model for id...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/j.mbs.2019.01.009

    authors: Yang Q,Jia C,Li T

    更新日期:2019-05-01 00:00:00

  • A differential-delay model of pasture accumulation and loss in controlled grazing systems.

    abstract::A grazing population dynamics model is proposed where organisms in a grazed population have a fixed life span. The motivating context is that of ruminants grazing grass-dominant pasture. The model takes the form of a differential-delay equation in which the rate of loss of pasture due to senescence at some time depend...

    journal_title:Mathematical biosciences

    pub_type: 杂志文章

    doi:10.1016/0025-5564(94)90031-0

    authors: Woodward SJ,Wake GC

    更新日期:1994-05-01 00:00:00