Thiophilic adsorption: a comparison of model protein behavior.

Abstract:

:A newly recognized type of protein-ligand interaction phenomenon has resulted in the preparation of simple, nonionic, and highly specific gel derivatives for selective adsorption chromatography. The essential structure of the immobilized ligand can be represented as agarose-CH2CH2SO2CH2CH2SCH2CH2OH, which was prepared by using mercaptoethanol to derivatize [0.9-1.0 mmol (g of dry gel)-1] divinyl sulfone activated agarose (thiophilic or T-gel). Proteins interacting with this ligand are provisionally termed "thiophilic" to recognize their affinity for the definitive sulfone-thioether constituents. To better understand the experimental variables affecting adsorption efficiency and selectivity, several well-characterized proteins with diverse physicochemical features have been evaluated for thiophilic properties. Thiophilic interaction chromatography was investigated as a function of pH as well as the type and concentration of water-structure-forming salts required to promote adsorption. The model proteins characterized varied distinctly in their individual thiophilic affinities. At acidic pH values, a salt-independent adsorption process was observed. Furthermore, a minimum in the salt-promoted thiophilic adsorption tendency at pH 5-6 was found, with varying magnitude, for each of the model proteins evaluated. Recovery of adsorbed proteins routinely varied from 90% to 100%. There does not appear as yet to be any easily recognized physicochemical property associated with either thiophilic or nonthiophilic behavior. These results suggest that thiophilic interaction chromatography is a process that utilizes a previously unrecognized protein-ligand interaction mechanism. We suggest that salt allows the protein into close proximity with the sulfone-thioether group where short-range forces are effective.(ABSTRACT TRUNCATED AT 250 WORDS)

journal_name

Biochemistry

journal_title

Biochemistry

authors

Hutchens TW,Porath J

doi

10.1021/bi00396a049

subject

Has Abstract

pub_date

1987-11-03 00:00:00

pages

7199-204

issue

22

eissn

0006-2960

issn

1520-4995

journal_volume

26

pub_type

杂志文章
  • Biochemical characterization of the tetrodotoxin binding protein from Electrophorus electricus.

    abstract::Biochemical properties of a detergent-solubilized tetrodotoxin binding component from Electrophorus electricus have been examined and compared with those found for the membrane-bound protein. The toxin binding component was solubilized with high efficiency by a variety of nonionic detergents and with lower efficiency ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00267a029

    authors: Moore AC,Agnew WS,Raftery MA

    更新日期:1982-11-23 00:00:00

  • One-step purification of Actinoplanes missouriensis D-xylose isomerase by high-performance immobilized copper-affinity chromatography: functional analysis of surface histidine residues by site-directed mutagenesis.

    abstract::D-Xylose isomerase (XI) is a heat-stable homotetrameric enzyme used in industry for the production of high-fructose corn syrups by isomerization of D-glucose into D-fructose. To carry out biochemical and structural studies of this enzyme and of its engineered variants, a rapid and convenient method of purification of ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00125a009

    authors: Mrabet NT

    更新日期:1992-03-17 00:00:00

  • A carbon-13 nuclear magnetic resonance study of hyperactive and hypoactive derivatives of luteinizing hormone-releasing hormone: des-Gly-NH210-[DLeu6]LH-RH ethylamide and des-Gly-NH210-[L-Leu6]LH-RH ethylamide.

    abstract::The carbon-13 (13C) nuclear magnetic resonance (NMR) behavior of the hyperactive analogue of luteinizing-hormone-releasing hormone (LH-RH), des-Gly-NH2(10)-[D-Leu6]LH-RH ethylamide, has been studied. The spectra are compared with those of the hypoactive des-Gly-NH2(10)-[L-Leu6]LH-RH ethylamide. Spin-lattice relaxation...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00666a020

    authors: Deslauriers R,Komoroski RA,Levy GC,Seely JH,Smith IC

    更新日期:1976-10-19 00:00:00

  • Probing the heme iron coordination structure of alkaline chloroperoxidase.

    abstract::The mechanism by which the heme-containing peroxidase, chloroperoxidase, is able to chlorinate substrates is poorly understood. One approach to advance our understanding of the mechanism of the enzyme is to determine those factors which contribute to its stability. In particular, under alkaline conditions, chloroperox...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi961512m

    authors: Blanke SR,Martinis SA,Sligar SG,Hager LP,Rux JJ,Dawson JH

    更新日期:1996-11-19 00:00:00

  • Identification of a cis-acting negative DNA element which modulates human hepatic triglyceride lipase gene expression.

    abstract::The promoter fragment -1550/+129 of the human hepatic triglyceride lipase (HTGL) gene drives the expression of the CAT gene in HepG2 cells, albeit at very low levels. Transient transfections in HepG2 and HeLa cells of 5' deletion constructs indicated that the regulatory elements that control this expression are locate...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00088a018

    authors: Hadzopoulou-Cladaras M,Cardot P

    更新日期:1993-09-21 00:00:00

  • Profiling Aglycon-Recognizing Sites of UDP-glucose:glycoprotein Glucosyltransferase by Means of Squarate-Mediated Labeling.

    abstract::Because of its ability to selectively glucosylate misfolded glycoproteins, UDP-glucose:glycoprotein glucosyltransferase (UGGT) functions as a folding sensor in the glycoprotein quality control system in the endoplasmic reticulum (ER). The unique property of UGGT derives from its ability to transfer a glucose residue t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.5b00785

    authors: Ohara K,Takeda Y,Daikoku S,Hachisu M,Seko A,Ito Y

    更新日期:2015-08-11 00:00:00

  • Determination of the three-dimensional structure of the bifunctional alpha-amylase/trypsin inhibitor from ragi seeds by NMR spectroscopy.

    abstract::The three-dimensional structure of the bifunctional alpha-amylase/trypsin inhibitor (RBI) from seeds of ragi (Eleusine coracana Gaertneri) has been determined in solution using multidimensional 1H and 15N NMR spectroscopy. The inhibitor consists of 122 amino acids, with 5 disulfide bridges, and belongs to the plant al...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00026a009

    authors: Strobl S,Mühlhahn P,Bernstein R,Wiltscheck R,Maskos K,Wunderlich M,Huber R,Glockshuber R,Holak TA

    更新日期:1995-07-04 00:00:00

  • Either the carboxyl- or the amino-terminal region of the human ecto-ATPase (E-NTPDase 2) confers detergent and temperature sensitivity to the chicken ecto-ATP-diphosphohydrolase (E-NTPDase 8).

    abstract::Human ecto-ATPase (E-NTPDase 2) and chicken ecto-ATP-diphosphohydrolase (E-NTPDase 8) are cell surface nucleotidases with two transmembranous domains, one each at the N- and C-termini. Hydrolysis of substrates occurs in active sites residing in their extracellular domains. Human ecto-ATPase activity is decreased by NP...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi050019k

    authors: Mukasa T,Lee Y,Knowles AF

    更新日期:2005-08-23 00:00:00

  • RuvB protein-mediated ATP hydrolysis: functional asymmetry in the RuvB hexamer.

    abstract::A survey of RuvB protein-mediated ATP hydrolysis yields the following observations. (1) The RuvB protein exhibits a DNA-independent ATPase activity with a turnover number (based on a RuvB monomer) approaching 6 min-1 and a Km of 154 microM. Single-stranded DNA and linear duplex DNA have small but significant effects o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00030a019

    authors: Marrione PE,Cox MM

    更新日期:1995-08-01 00:00:00

  • Identifying the lipid-protein interface and transmembrane structural transitions of the Torpedo Na,K-ATPase using hydrophobic photoreactive probes.

    abstract::To identify regions of the Torpedo Na,K-ATPase alpha-subunit that interact with membrane lipid and to characterize conformationally dependent structural changes in the transmembrane domain, we have proteolytically mapped the sites of photoincorporation of the hydrophobic compounds 3-(trifluoromethyl)-3-(m-[(125)I]iodo...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0015461

    authors: Blanton MP,McCardy EA

    更新日期:2000-11-07 00:00:00

  • Antisense L/D-oligodeoxynucleotide chimeras: nuclease stability, base-pairing properties, and activity at directing ribonuclease H.

    abstract::Ultraviolet thermal denaturation studies substantiate our earlier hypothesis that substitution of a L-nucleotide residue for a D-nucleotide within a DNA duplex permits a stable structure in which all bases are paired through Watson-Crick hydrogen bonds (Damha, M. J., Giannaris, P. A., Marfey, P., & Reid, L. S. (1991) ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00191a015

    authors: Damha MJ,Giannaris PA,Marfey P

    更新日期:1994-06-28 00:00:00

  • Sugar recognition by CscB and LacY.

    abstract::The sucrose permease (CscB) and lactose permease (LacY) of Escherichia coli belong to the oligosaccharide/H(+) symporter subfamily of the major facilitator superfamily, and both catalyze sugar/H(+) symport across the cytoplasmic membrane. Thus far, there is no common substrate for the two permeases; CscB transports su...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi201592y

    authors: Sugihara J,Smirnova I,Kasho V,Kaback HR

    更新日期:2011-12-27 00:00:00

  • Isolation and characterization of a dog serum lipoprotein having apolipoprotein A-I as its predominant protein constituent.

    abstract::The serum high density lipoproteins (HDL) of normolipemic dogs (beagles) were isolated in the density range of p 1.063 to 1.21 g/ml, and characterized in terms of composition and physical properties (flotation and diffusion coefficients, partial specific volume, molecular weight, electrophoretic mobility, ultraviolet ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00654a022

    authors: Edelstein C,Lewis LL,Shainoff JR,Naito H,Scanu AM

    更新日期:1976-05-04 00:00:00

  • There is only one phosphoenzyme intermediate with bound calcium on the reaction pathway of the sarcoplasmic reticulum calcium ATPase.

    abstract::Identical first-order rate constants for phosphorylation of the calcium ATPase of sarcoplasmic reticulum by bound inorganic phosphate (Pi) of 25 +/- 2 s-1 with empty vesicles and 25 +/- 1 s-1 with vesicles that were passively loaded with 40 mM Ca2+ were obtained by treating the reaction as an approach to equilibrium (...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00009a039

    authors: Myung J,Jencks WP

    更新日期:1995-03-07 00:00:00

  • Crystal structure of guanosine-free ribonuclease T1, complexed with vanadate (V), suggests conformational change upon substrate binding.

    abstract::Ribonuclease T1 was crystallized in the presence of vanadate(V). The crystal structure was solved by molecular replacement and refined by least-squares methods using stereochemical restraints. The refinement was based on data between 10 and 1.8 A and converged at a crystallographic R factor of 0.137. Except for the su...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00445a014

    authors: Kostrewa D,Choe HW,Heinemann U,Saenger W

    更新日期:1989-09-19 00:00:00

  • Origin of the anomalous Fe-CO stretching mode in the CO complex of Ascaris hemoglobin.

    abstract::We report an unusually high frequency (543 cm(-)(1)) for an Fe-CO stretching mode in the CO complex of Ascaris suum hemoglobin as compared to vertebrate hemoglobins in which the frequency of the Fe-CO mode is much lower. A second Fe-CO stretching mode in Ascaris hemoglobin is observed at 515 cm(-1). We propose that th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9922087

    authors: Das TK,Friedman JM,Kloek AP,Goldberg DE,Rousseau DL

    更新日期:2000-02-01 00:00:00

  • Protonmotive activity of cytochrome c oxidase: control of oxidoreduction of the heme centers by the protonmotive force in the reconstituted beef heart enzyme.

    abstract::This paper contributes to the characterization of partial steps of electron and proton transfer in mitochondrial cytochrome c oxidase with respect to their membrane arrangement and involvement in energy-linked protonmotive activity. It is shown that delta psi controls electron flow from cytochrome c to heme a is consi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00464a008

    authors: Capitanio N,De Nitto E,Villani G,Capitanio G,Papa S

    更新日期:1990-03-27 00:00:00

  • ATR-FTIR spectroscopy studies of iron-sulfur protein and cytochrome c1 in the Rhodobacter capsulatus cytochrome bc1 complex.

    abstract::Redox transitions in the Rhodobacter capsulatus cytochrome bc(1) complex were investigated by perfusion-induced attenuated total reflection-Fourier transform infrared (ATR-FTIR) spectroscopy combined with synchronous visible spectroscopy, in both the wild type and a cytochrome c(1) point mutant, M183K, in which the mi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi049211x

    authors: Iwaki M,Osyczka A,Moser CC,Dutton PL,Rich PR

    更新日期:2004-07-27 00:00:00

  • Photo-cross-linking studies suggest a model for the architecture of an active human immunodeficiency virus type 1 integrase-DNA complex.

    abstract::The virally encoded integrase protein carries out retroviral integration, which requires specific interactions with the two ends of the viral DNA, and also with host DNA that is the target of integration. We attached a photo-cross-linking agent to specific viral and target DNA sites to identify regions of the integras...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972949c

    authors: Heuer TS,Brown PO

    更新日期:1998-05-12 00:00:00

  • Thermodynamics of reversible and irreversible unfolding and domain interactions of glucoamylase from Aspergillus niger studied by differential scanning and isothermal titration calorimetry.

    abstract::The stability of three forms of glucoamylase from Aspergillus niger has been investigated by differential scanning and isothermal titration calorimetry: Glucoamylase 1 (GA1), which consists of a catalytic domain and a starch-binding domain (SBD) connected by a heavily O-glycosylated linker region; glucoamylase 2 (GA2)...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990185q

    authors: Christensen T,Svensson B,Sigurskjold BW

    更新日期:1999-05-11 00:00:00

  • Phenothiazine-binding and attachment sites of CAPP1-calmodulin.

    abstract::In the presence of Ca2+ norchlorpromazine isothiocyanate forms a monocovalent complex with calmodulin: CAPP1-calmodulin (Newton et al, 1983). Trypsin digestion of [3H]CAPP1-calmodulin yields as the major radioactive peptide N epsilon-CAPP-Lys-Met-Lys, corresponding to residues 75-77 of calmodulin. Stoichiometric amoun...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00435a019

    authors: Newton DL,Klee CB

    更新日期:1989-05-02 00:00:00

  • Solution structure of the paramagnetic complex of the N-terminal domain of calmodulin with two Ce3+ ions by 1H NMR.

    abstract::The solution structure of the dicerium(III) complex of the N-terminal domain of calmodulin (Ce2-TR1C hereafter) has been solved employing paramagnetic T1 relaxation enhancements and pseudocontact shifts introduced by the Ce3+ ions, together with conventional NOE constraints. The use of pseudocontact shift constraints ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi971022+

    authors: Bentrop D,Bertini I,Cremonini MA,Forsén S,Luchinat C,Malmendal A

    更新日期:1997-09-30 00:00:00

  • Absence of evidence for metabolite-modulated association between alpha-glycerol-3-phosphate dehydrogenase and L-lactate dehydrogenase.

    abstract::Evidence for the NADH-modulated formation of a complex between alpha-glycerol-3-phosphate dehydrogenase and l-lactate dehydrogenase was reported [Yong, H., Thomas, G. A., and Peticolas, W. L. (1993) Biochemistry 32, 11124-11131]. This NADH-modulated association suggested a mechanism of potentially great importance to ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi027244b

    authors: Lehoux EA,Baker SM,Kovina MV,Hays FA,Spivey HO

    更新日期:2003-05-27 00:00:00

  • A coupled dinuclear iron cluster that is perturbed by substrate binding in myo-inositol oxygenase.

    abstract::myo-Inositol oxygenase (MIOX) uses iron as its cofactor and dioxygen as its cosubstrate to effect the unique, ring-cleaving, four-electron oxidation of its cyclohexan-(1,2,3,4,5,6-hexa)-ol substrate to d-glucuronate. The nature of the iron cofactor and its interaction with the substrate, myo-inositol (MI), have been p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0519607

    authors: Xing G,Hoffart LM,Diao Y,Prabhu KS,Arner RJ,Reddy CC,Krebs C,Bollinger JM Jr

    更新日期:2006-05-02 00:00:00

  • Nucleosome recognition by the Piccolo NuA4 histone acetyltransferase complex.

    abstract::The mechanisms by which multisubunit histone acetyltransferase (HAT) complexes recognize and perform efficient acetylation on nucleosome substrates are largely unknown. Here, we use a variety of biochemical approaches and compare histone-based substrates of increasing complexity to determine the critical components of...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi602366n

    authors: Berndsen CE,Selleck W,McBryant SJ,Hansen JC,Tan S,Denu JM

    更新日期:2007-02-27 00:00:00

  • Importance of size and sulfation of heparin in release of basic fibroblast growth factor from the vascular endothelium and extracellular matrix.

    abstract::We have characterized the importance of size, sulfation, and anticoagulant activity of heparin in release of basic fibroblast growth factor (bFGF) from the subendothelial extracellular matrix (ECM) and the luminal surface of the vascular endothelium. For this purpose, 125I-bFGF was first incubated with ECM and conflue...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00122a027

    authors: Ishai-Michaeli R,Svahn CM,Weber M,Chajek-Shaul T,Korner G,Ekre HP,Vlodavsky I

    更新日期:1992-02-25 00:00:00

  • Expression, purification, and characterization of human factor XIII in Saccharomyces cerevisiae.

    abstract::Factor XIII is the terminal enzyme of the clotting cascade. A cDNA sequence encoding human placental factor XIII was expressed in Saccharomyces cerevisiae with the yeast ADH2-4c promoter. Expression levels were a strong function of the noncoding flanking DNA content of the construction. When the terminal 3'-flanking n...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00459a028

    authors: Bishop PD,Teller DC,Smith RA,Lasser GW,Gilbert T,Seale RL

    更新日期:1990-02-20 00:00:00

  • Ligand binding to heme proteins: the effect of light on ligand binding in myoglobin.

    abstract::Extended illumination slows the rebinding of CO to myoglobin after photodissociation at cryogenic temperatures. Two types of models have been put forward to explain the effect: motions of the CO within the heme pocket or conformational transitions of the protein. To resolve this ambiguity, we have studied the effect o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00249a030

    authors: Nienhaus GU,Mourant JR,Chu K,Frauenfelder H

    更新日期:1994-11-15 00:00:00

  • Substitution of Tyr254 with Phe at the active site of flavocytochrome b2: consequences on catalysis of lactate dehydrogenation.

    abstract::A role for Tyr254 in L-lactate dehydrogenation catalyzed by flavocytochrome b2 has recently been proposed on the basis of the known active-site structure and of studies that had suggested a mechanism involving the initial formation of a lactate carbanion [Lederer, F., & Mathews, F.S. (1987) in Flavins and Flavoprotein...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00479a008

    authors: Dubois J,Chapman SK,Mathews FS,Reid GA,Lederer F

    更新日期:1990-07-10 00:00:00

  • Modulator protein as a component of the myosin light chain kinase from chicken gizzard.

    abstract::The Ca2+-dependent regulation of smooth muscle actomyosin involves a myosin light chain kinase (ATP: myosin light chain phosphotransferase). It has been shown (Dabrowska, R., Aromatorio, D., Sherry, J.M.F., and Hartshorne, D.J. 1977, Biochem. Biophys. Res. Commun. 78, 1263) that the kinase is composed of two proteins ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00595a010

    authors: Dabrowska R,Sherry JM,Aromatorio DK,Hartshorne DJ

    更新日期:1978-01-24 00:00:00