当前位置： SCI文献检索 > JOURNAL OF APPLIED GENETICS期刊下所有文献 > The genetic diversity of group-1 homoeologs and characterization of novel LMW-GS genes from Chinese Xinjiang winter wheat landraces (Triticum aestivum L.).

The genetic diversity of group-1 homoeologs and characterization of novel LMW-GS genes from Chinese Xinjiang winter wheat landraces (Triticum aestivum L.).

Abstract：

:Group-1 homoelog genes in wheat genomes encode storage proteins and are the major determinants of wheat product properties. Consequently, understanding the genetic diversity of group-1 homoelogs and genes encoding storage proteins, especially the low-molecular-weight glutenins (LMW-GSs), within wheat landrace genomes is necessary to further improve the quality of modern wheat crops. The genetic diversity of group-1 homoelogs in 75 Xinjiang winter wheat landraces was evaluated by Diversity Arrays Technology (DArT) markers. These data were used to select 15 landraces for additional LMW-GS gene isolation. The genetic similarity coefficients among landraces were highly similar regardless if considering the diversity markers on 1A, 1B, and 1D chromosomes individually or using all of the markers together. These similarities were evinced by the generation of four similar cluster dendrograms that comprised 11-15 landrace groups, regardless of the dataset used to generate the dendrograms. A total of 105 LMW-GS sequences corresponding to 79 unique genes were identified overall by using primers designed to target Glu-A3 and Glu-B3 loci, and 54 mature proteins were predicted from the unique LMW-GS genes. Nine novel chimeric LMW-GS genes were also identified, of which, one was recombinant for -i/-m, one for -s/-m, and seven for -m/-m parent genes, respectively. Phylogenetic analysis separated all of the LMW-GSs into three clades that were supported by moderate bootstrap values (> 70%). The clades corresponded to LMW-GS genes primarily harboring different N-terminals. These results provide useful information for better understanding the evolutionary genetics of the important Glu-3 locus of wheat, and they also provide new novel gene targets that can potentially be exploited to improve wheat quality.

journal_name

J Appl Genet

journal_title

Journal of applied genetics

authors

Hu X,Dai S,Yan Y,Liu Y,Zhang J,Lu Z,Wei Y,Zheng Y,Cong H,Yan Z

doi

10.1007/s13353-020-00564-6

subject

Has Abstract

pub_date

2020-09-01 00:00:00

pages

379-389

issue

3

eissn

1234-1983

issn

2190-3883

pii

10.1007/s13353-020-00564-6

journal_volume

61

pub_type

杂志文章

相关文献

JOURNAL OF APPLIED GENETICS文献大全
  • Post mortem identification of deoxyguanosine kinase (DGUOK) gene mutations combined with impaired glucose homeostasis and iron overload features in four infants with severe progressive liver failure.

    abstract：:Deoxyguanosine kinase deficiency (dGK) is a frequent cause of the hepatocerebral form of mitochondrial depletion syndrome (MDS). A group of 28 infants with severe progressive liver failure of unknown cause was recruited for post mortem search for deoxyguanosine kinase (DGUOK) gene mutations. Four affected patients (14...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-010-0008-y

    authors： Pronicka E,Węglewska-Jurkiewicz A,Taybert J,Pronicki M,Szymańska-Dębińska T,Karkucińska-Więckowska A,Jakóbkiewicz-Banecka J,Kowalski P,Piekutowska-Abramczuk D,Pajdowska M,Socha P,Sykut-Cegielska J,Węgrzyn G

    更新日期：2011-02-01 00:00:00

  • Limb-girdle muscular dystrophy with severe heart failure overlapping with lipodystrophy in a patient with LMNA mutation p.Ser334del.

    abstract：:Laminopathies, a group of heterogeneous disorders associated with lamin A/C gene (LMNA) mutations, encompass a wide spectrum of clinical phenotypes, which may present as separate disease or as overlapping syndromes. We describe a 35-year-old female in whom a novel sporadic heterozygous mutation c.1001_1003delGCC (p.Se...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-016-0365-2

    authors： Madej-Pilarczyk A,Niezgoda A,Janus M,Wojnicz R,Marchel M,Fidziańska A,Grajek S,Hausmanowa-Petrusewicz I

    更新日期：2017-02-01 00:00:00

  • A simplified AFLP method for fingerprinting of common wheat (Triticum aestivum L.) cultivars.

    abstract：:The simplified AFLP method was developed and evaluated for identification and genetic diversity studies of wheat cultivars. Selective primers exploited in AFLP assay based on a single cutting enzyme PstI ((PstI)AFLP) generated total of 111 robust fragments, including 67 (60%) monomorphic and 12 (11%) cultivar-specific...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：

    authors： Tyrka M

    更新日期：2002-01-01 00:00:00

  • QTL mapping of 1000-kernel weight, kernel length, and kernel width in bread wheat (Triticum aestivum L.).

    abstract：:Kernel size and morphology influence the market value and milling yield of bread wheat (Triticum aestivum L.). The objective of this study was to identify quantitative trait loci (QTLs) controlling kernel traits in hexaploid wheat. We recorded 1000-kernel weight, kernel length, and kernel width for 185 recombinant inb...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/BF03208872

    authors： Ramya P,Chaubal A,Kulkarni K,Gupta L,Kadoo N,Dhaliwal HS,Chhuneja P,Lagu M,Gupta V

    更新日期：2010-01-01 00:00:00

  • Expression analysis of somatic embryogenesis-related SERK, LEC1, VP1 and NiR ortologues in rye (Secale cereale L.).

    abstract：:The genetic basis of the regeneration process in cultured immature embryos of rye (Secale cereale L.) was analyzed. The experiments were designed to reveal differences between the in vitro culture responses of two inbred lines: L318 (a high regeneration ability) and L9 (a low potential for regeneration). The rye ortol...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-010-0015-z

    authors： Gruszczyńska A,Rakoczy-Trojanowska M

    更新日期：2011-02-01 00:00:00

  • The mutation profile of differentiated thyroid cancer coexisting with undifferentiated anaplastic cancer resembles that of anaplastic thyroid cancer but not that of archetypal differentiated thyroid cancer.

    abstract：:Differentiated thyroid cancer (DTC) has one of the lowest cancer mutational burdens, while anaplastic thyroid cancer (ATC) has a much higher mutation frequency. A fraction of ATC has an associated differentiated component, which suggests the coevolution of both cancers. Here, we aimed to compare mutation frequency in ...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-020-00594-0

    authors： Mika J,Łabaj W,Chekan M,Abramowicz A,Pietrowska M,Polański A,Widłak P

    更新日期：2021-02-01 00:00:00

  • A new PCR-RFLP within the domestic pigeon (Columba livia var. domestica) cytochrome b (MTCYB) gene.

    abstract：:A total of 244 domestic pigeons (Columba livia var. domestica) were genotyped using the PCR-RFLP method. A 999 bp fragment of the MTCYB gene was amplified. The amplification products were digested with restriction enzymes. PCR-RFLP for MvaI restriction enzyme was observed. Frequencies of alleles were as follows: MTCYB...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：

    authors： Dybus A,Knapik K

    更新日期：2005-01-01 00:00:00

  • A new SNP in the promoter region of the porcine MYF5 gene has no effect on its transcript level in m. longissimus dorsi.

    abstract：:Myogenic factor 5 (myf-5) is the product of the MYF5 gene, belonging to the MyoD family. This transcription factor participates in the control of myogenesis. We identified 3 new mutations in the promoter region of the gene: A65C, C580T and C613T. The aim of this study was to evaluate the influence of the A65C transver...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/BF03194600

    authors： Urbański P,Flisikowski K,Starzyński RR,Kurył J,Kamyczek M

    更新日期：2006-01-01 00:00:00

  • Decreased neural stem cell proliferation and olfaction in mouse models of Niemann-Pick C1 disease and the response to hydroxypropyl-β-cyclodextrin.

    abstract：:The Npc1nih/nih-null model and the Npc1nmf164/nmf164 hypomorph models of Niemann-Pick C1 (NPC1) disease show defects in olfaction. We have tested the effects of the life-prolonging treatment hydroxypropyl-beta-cyclodextrin (HPBCD) on olfaction and neural stem cell numbers when delivered either systemically or by nasal...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-019-00517-8

    authors： Dragotto J,Palladino G,Canterini S,Caporali P,Patil R,Fiorenza MT,Erickson RP

    更新日期：2019-11-01 00:00:00

  • CCAAT/enhancer binding protein-beta negatively regulates the expression of glycerol-3-phosphate dehydrogenase 1 in pig PK-15 cells.

    abstract：:Soluble glycerol-3-phosphate dehydrogenase 1 (GPD1, EC 1.1.1.8) plays important roles in the synthesis of triacylglycerol and in the glycerol-3-phosphate shutter. Though GPD1 is expressed in most adult tissues, little is known about the regulation of its expression. In this study, we analyzed the characters, organizat...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-011-0050-4

    authors： Gao Y,Pan Y

    更新日期：2011-11-01 00:00:00

  • Biochemical differences in Cannabis sativa L. depending on sexual phenotype.

    abstract：:Hemp (Cannabis sativa L.) is a species considered as having one of the most complicated mechanisms of sex determination. Peroxidase and esterase isoenzymes in leaves of the two sexual phenotypes of hemp were studied. Significant differences in isoperoxidase and isoesterase patterns were found between male and female p...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：

    authors： Truţa E,Gille E,Tóth E,Maniu M

    更新日期：2002-01-01 00:00:00

  • A novel genotype c.1228C>G/c.1448C-1498C (L371V/Rec-NciI) in a 3-year-old child with type 1 Gaucher disease.

    abstract：:Gaucher disease (GD) is an autosomal recessive inborn error of metabolism, resulting from a deficiency of the enzyme glucocerebrosidase, causing an accumulation of the glycolipid glucocerebroside within lysosomes of macrophages in the reticuloendothelial system. Three major clinical forms have been assigned and more t...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/BF03195642

    authors： Yassin NA,Muwakkit SA,Ibrahim AO,Kayim IM,Habbal MZ,Chamseddine NM,Musallam KM,Shamseddine AI

    更新日期：2008-01-01 00:00:00

  • Neural stem cell implantation extends life in Niemann-Pick C1 mice.

    abstract：:In order to evaluate the phenotypic effects of implanted neural stem cells (NSCs) in the mouse model of Niemann-Pick C (NPC) disease, we injected a well-characterized clone of murine NSCs into the cerebella of neonatal Npc1(-/-) and control mice. The implanted cells survived and were abundant in some regions of the ce...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/BF03195222

    authors： Ahmad I,Hunter RE,Flax JD,Snyder EY,Erickson RP

    更新日期：2007-01-01 00:00:00

  • Analysis of chromosomal polymorphism in barley (Hordeum vulgare L. ssp. vulgare) and between H. vulgare and H. chilense using three-color fluorescence in situ hybridization (FISH).

    abstract：:The aim of the present work was to study chromosomal polymorphism within cultivated barley (Hordeum vulgare ssp. vulgare) using three-color fluorescence in situ hybridization (FISH). The physical distribution of the most frequently used, highly repetitive DNA sequences (GAA)7 specific for pericentromeric heterochromat...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-013-0167-8

    authors： Szakács É,Kruppa K,Molnár-Láng M

    更新日期：2013-11-01 00:00:00

  • The F279Y polymorphism of the GHR gene and its relation to milk production and somatic cell score in German Holstein dairy cattle.

    abstract：:The bovine growth hormone receptor (GHR) gene has been identified as a strong positional and functional candidate gene influencing milk production. A non-synonymous single nucleotide polymorphism (SNP) in exon 8 leads to a phenylalanine to tyrosine amino acid substitution (F279Y) in the receptor. The aim of the study ...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-011-0051-3

    authors： Rahmatalla SA,Müller U,Strucken EM,Reissmann M,Brockmann GA

    更新日期：2011-11-01 00:00:00

  • A novel TPM2 gene splice-site mutation causes severe congenital myopathy with arthrogryposis and dysmorphic features.

    abstract：:To date, only two splice-site mutations within the TPM2 gene have been shown to be causative for congenital myopathies. While the majority of TPM2 gene mutations are causative for nemaline myopathy, cap disease or distal arthrogryposis, some mutations in this gene have been found to be associated with non-specific con...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-016-0368-z

    authors： Mroczek M,Kabzińska D,Chrzanowska KH,Pronicki M,Kochański A

    更新日期：2017-05-01 00:00:00

  • Homozygous 2p11.2 deletion supports the implication of ELMOD3 in hearing loss and reveals the potential association of CAPG with ASD/ID etiology.

    abstract：:Autism spectrum disorder (ASD) is a set of neurodevelopmental conditions characterized by early-onset difficulties in social communication and unusually restricted, repetitive behavior and interests. Parental consanguinity may lead to higher risk of ASD and to more severe clinical presentations in the offspring. Studi...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-018-0472-3

    authors： Lahbib S,Leblond CS,Hamza M,Regnault B,Lemée L,Mathieu A,Jaouadi H,Mkaouar R,Youssef-Turki IB,Belhadj A,Kraoua I,Bourgeron T,Abdelhak S

    更新日期：2019-02-01 00:00:00

  • Oligonucleotides replacing the roles of repetitive sequences pAs1, pSc119.2, pTa-535, pTa71, CCS1, and pAWRC.1 for FISH analysis.

    abstract：:Hybrids derived from wheat (Triticum aestivum L.) × rye (Secale cereale L.) have been widely studied because of their important roles in wheat cultivar improvement. Repetitive sequences pAs1, pSc119.2, pTa-535, pTa71, CCS1, and pAWRC.1 are usually used as probes in fluorescence in situ hybridization (FISH) analysis of...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-014-0215-z

    authors： Tang Z,Yang Z,Fu S

    更新日期：2014-08-01 00:00:00

  • DNA asymmetry and the replicational mutational pressure.

    abstract：:The mode of replication and organisation of bacterial genomes impose asymmetry on their nucleotide composition. The asymmetry is seen in coding and non-coding sequences and is reflected in the amino acid composition of proteins. The mechanisms generating asymmetry include: unequal mutation rates connected with replica...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：

    authors： Kowalczuk M,Mackiewicz P,Mackiewicz D,Nowicka A,Dudkiewicz M,Dudek MR,Cebrat S

    更新日期：2001-01-01 00:00:00

  • Cardiac ion channel gene mutations in Greek long QT syndrome patients.

    abstract：:The long QT syndrome (LQTS) is an inherited cardiac arrhythmia that may lead to sudden death in the absence of structural heart disease. Mutations in the cardiac potassium and sodium channel genes can be found in approximately 70 percent of patients with a highly probable clinical diagnosis. In this study, we aimed to...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/BF03208882

    authors： Kotta CM,Anastasakis A,Gatzoulis K,Papagiannis J,Geleris P,Stefanadis C

    更新日期：2010-01-01 00:00:00

  • A de novo interstitial 6q deletion in a boy with a split hand malformation.

    abstract：:We report on a de novo interstitial deletion of (6)(q15q22.2) in a 5-year-old boy with developmental delay, microcephaly, facial dysmorphism, cryptorchidism, congenital heart defect, and split-hand malformation. Previous reports and this patient suggest that 6q21 may contain a gene or genes related either directly or ...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/BF03195240

    authors： Duran-Gonzalez J,Gutierrez-Angulo M,Garcia-Cruz D,Ayala Mde L,Padilla M,Davalos IP

    更新日期：2007-01-01 00:00:00

  • The cre-inducer doxycycline lowers cytokine and chemokine transcript levels in the gut of mice.

    abstract：:The antibiotic doxycycline is used as an inducer of recombinase (cre)-based conditional gene knockout in mice, which is a common tool to show the effect of disrupted gene functions only in one period of a research animal's life. However, other types of such antibiotics have been shown to have a strong impact on the im...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-017-0401-x

    authors： Hansen AK,Malm SA,Metzdorff SB

    更新日期：2017-11-01 00:00:00

  • Genetic control of bacterial biofilms.

    abstract：:Nearly all bacterial species, including pathogens, have the ability to form biofilms. Biofilms are defined as structured ecosystems in which microbes are attached to surfaces and embedded in a matrix composed of polysaccharides, eDNA, and proteins, and their development is a multistep process. Bacterial biofilms const...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章,评审

    doi：10.1007/s13353-015-0309-2

    authors： Wolska KI,Grudniak AM,Rudnicka Z,Markowska K

    更新日期：2016-05-01 00:00:00

  • Novel linkage mapping approach using DNA pooling in human and animal genetics. II. Detection of quantitative traits loci in dairy cattle.

    abstract：:Selective DNA pooling is an advanced methodology for linkage mapping of quantitative trait loci (QTL) in farm animals. The principle is based on densitometric estimates of marker allele frequency in pooled DNA samples of phenotypically extreme individuals from half-sib, backcross and F(2) experimental designs in farm ...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章,评审

    doi：

    authors： Pareek CS,Pareek RS,Walawski K

    更新日期：2002-01-01 00:00:00

  • Genetic relationships among wheat genotypes, as revealed by microsatellite markers and pedigree analysis.

    abstract：:Genetic relationships among 20 elite wheat genotypes were studied using microsatellite markers and pedigree analysis. A total of 93 polymorphic bands were obtained with 25 microsatellite primer pairs. Coefficient of parentage (COP) values were calculated using parentage information at the expansion level of 5. The ped...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：

    authors： Sud S,Bains NS,Nanda GS

    更新日期：2005-01-01 00:00:00

  • Genetic variability of milk fatty acids.

    abstract：:The milk fatty acid (FA) profile is far from the optimal fat composition in regards to human health. The natural sources of variation, such as feeding or genetics, could be used to increase the concentrations of unsaturated fatty acids. The impact of feeding is well described. However, genetic effects on the milk FA c...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/BF03195649

    authors： Arnould VM,Soyeurt H

    更新日期：2009-01-01 00:00:00

  • Fingerprinting of common wheat cultivars with an Alw44I-based AFLP method.

    abstract：:A simplified AFLP method, based on methylation-sensitive Alw44I restriction endonuclease, has been developed and evaluated for fingerprinting 15 wheat cultivars. The selected germplasms represented groups of spring and winter wheats with and without the 1BL.1RS translocation. Ten selective primers yielded 57 markers, ...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：

    authors： Tyrka M

    更新日期：2004-01-01 00:00:00

  • Epigenetic chromatin modifications in barley after mutagenic treatment.

    abstract：:In addition to their normal developmental processes, plants have evolved complex genetic and epigenetic regulatory mechanisms to cope with various environmental stresses. It has been shown that both DNA methylation and histone modifications are involved in DNA damage response to various types of stresses. In this stud...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：10.1007/s13353-014-0226-9

    authors： Braszewska-Zalewska A,Tylikowska M,Kwasniewska J,Szymanowska-Pulka J

    更新日期：2014-11-01 00:00:00

  • The current state of xenotransplantation.

    abstract：:Pigs as a source of grafts for xenotransplantation can help to overcome the rapidly growing shortage of human donors. However, in the case of pig-to-human transplantation, the antibody-xenoantigen complexes lead to the complement activation and immediate hyperacute rejection. Methods eliminating hyperacute rejection (...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章,评审

    doi：10.1007/s13353-014-0261-6

    authors： Zeyland J,Lipiński D,Słomski R

    更新日期：2015-05-01 00:00:00

  • Length polymorphism of PCR-amplified genomic fragments of the Pregnancy-Associated Glycoprotein (PAG) gene family in the pig and some other domestic and wild mammals.

    abstract：:Porcine pregnancy-associated glycoprotein genes (pPAG) are known as a multigene family, in which five members have been cloned and sequences of their cDNAs identified. Porcine PAG1 and pPAG3 genes, belonging to the pPAG1-like subfamily, both encode enzymatically inactive precursors. In contrast, cDNAs of pPAG2, pPAG4 ...

    journal_title：Journal of applied genetics

    pub_type： 杂志文章

    doi：

    authors： Szafrańska B,Panasiewicz G,Wacławik A

    更新日期：2001-01-01 00:00:00