Role of diverse fermentative factors towards microbial community shift in ruminants.

Abstract:

:Besides the liver, rumen is one of the most important components of metabolism in ruminants. However, the microbes residing in the rumen are influenced by several complex factors such as diet, which result in fluctuations in the rumen pH. Rumen pH affects feed intake and feed digestibility, subsequently causing microbial shift in the individual members of microbial community residing in the foregut and hindgut. This in turn causes an increase in lipopolysaccharide concentration, among other factors, in the gut fluid and animal blood. Irrespective of diet fed to animals, Firmicutes would probably be the most dominant in high grain diet while Bacteroidetes are dominant in hay diet, and both have a relative abundance of about 80% or more at times. The shift in microbial population is not limited to adult ruminants alone but also occur in calves. Firmicutes, Bacteroidetes, Actinobacteria, and Proteobacteria were the most abundant in both hay and concentrate diet of newly weaned calves. Prolonged, depressed pH, causes subacute ruminal acidosis. This leads to compromise in the integrity of both foregut and hindgut of ruminants, eventually causing structural changes in the gut physiology. Furthermore, diet containing C-12:0 and C-14:0, which are medium-chain fatty acids, were toxic to rumen protozoa. Phytochemical content in some plant residues when fed to animals also causes shift in microbial population. Therefore, foregut and hindgut pH stability is important for ruminant health and for optimal productivity.

journal_name

J Appl Microbiol

authors

Faniyi TO,Adegbeye MJ,Elghandour MMMY,Pilego AB,Salem AZM,Olaniyi TA,Adediran O,Adewumi MK

doi

10.1111/jam.14212

subject

Has Abstract

pub_date

2019-07-01 00:00:00

pages

2-11

issue

1

eissn

1364-5072

issn

1365-2672

journal_volume

127

pub_type

杂志文章,评审
  • Viability of Escherichia coli O157:H7 in natural river water determined by the use of flow cytometry.

    abstract::The enzymatic activity and viability of Escherichia coli O157:H7 in natural river water was determined by flow cytometry. River water was collected at two sites (an agricultural area and an industrial area) on the Aigawa River (Osaka, Japan). To facilitate estimation of the physiology of E. coli O157 in natural river ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.2000.00960.x

    authors: Tanaka Y,Yamaguchi N,Nasu M

    更新日期:2000-02-01 00:00:00

  • A feed additive containing Bacillus toyonensis (Toyocerin(®) ) protects against enteric pathogens in postweaning piglets.

    abstract:AIMS:This study evaluated the efficacy of a probiotic containing Bacillus toyonensis spores (Toyocerin(®) ) in postweaning piglets against enteric pathogens. METHODS AND RESULTS:Seven hundred and ninety-two healthy weaning pigs of a commercial farrow-to-finish pig farm were used. The negative control group fed without...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章,随机对照试验

    doi:10.1111/jam.12729

    authors: Kantas D,Papatsiros VG,Tassis PD,Giavasis I,Bouki P,Tzika ED

    更新日期:2015-03-01 00:00:00

  • Use of selected enterococci and Rhizopus oryzae proteases to hydrolyse wheat proteins responsible for celiac disease.

    abstract:AIMS:This work aimed at using a pool of selected enterococci and fungal proteases to hydrolyse wheat gluten during long-time fermentation. METHODS AND RESULTS:A liquid dough made with wheat flour (20% w/w) was fermented with three Enterococcus strains (dough A) or with the combination of enterococci and Rhizopus oryza...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2008.04008.x

    authors: M'hir S,Rizzello CG,Di Cagno R,Cassone A,Hamdi M

    更新日期:2009-02-01 00:00:00

  • Effect of biochanin A on corn grain (Zea mays) fermentation by bovine rumen amylolytic bacteria.

    abstract:AIMS:The objective was to determine the effect of biochanin A (BCA), an isoflavone produced by red clover (Trifolium pratense L.), on corn fermentation by rumen micro-organisms. METHODS AND RESULTS:When bovine rumen bacterial cell suspensions (n = 3) were incubated (24 h, 39°C) with ground corn, amylolytic bacteria in...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.13397

    authors: Harlow BE,Flythe MD,Aiken GE

    更新日期:2017-04-01 00:00:00

  • Characterization of a broad pH range protease of Candida caseinolytica.

    abstract:AIMS:The study of a protease secreted by Candida caseinolytica for use in future industrial applications. METHODS AND RESULTS:Growth of Candida caseinolytica on a medium containing milk induced a rapid production of an extracellular enzyme able to hydrolyse casein. The crude extract was applied to both Sephacryl S-200...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.2001.01458.x

    authors: Poza M,de Miguel T,Sieiro C,Villa TG

    更新日期:2001-11-01 00:00:00

  • Lactococcus piscium: a psychrotrophic lactic acid bacterium with bioprotective or spoilage activity in food-a review.

    abstract::The genus Lactococcus comprises 12 species, some known for decades and others more recently described. Lactococcus piscium, isolated in 1990 from rainbow trout, is a psychrotrophic lactic acid bacterium, probably disregarded because most of the strains are unable to grow at 30°C. During the last 10 years, this species...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章,评审

    doi:10.1111/jam.13179

    authors: Saraoui T,Leroi F,Björkroth J,Pilet MF

    更新日期:2016-10-01 00:00:00

  • Molecular phylogeny, identification and pathogenicity of Rhizopus oryzae associated with root rot of mulberry in India.

    abstract:AIMS:Root rot caused by a group of fungi is a serious disease in mulberry. This study aims to identify and characterize Rhizopus oryzae and other fungal species associated with root rot of mulberry in India. METHODS AND RESULTS:Rotted root samples were collected from the mulberry gardens from four states of Southern I...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.14959

    authors: Gnanesh BN,Tejaswi A,Arunakumar GS,Supriya M,Manojkumar HB,Tewary P

    更新日期:2020-12-04 00:00:00

  • PCR-fingerprinting and RAPD approaches for tracing the source of yeast contamination in a carbonated orange juice production chain.

    abstract:AIMS:To investigate the sort and the origin of the contamination of a packed fruit juice. METHODS AND RESULTS:Fifty-eight yeast isolates were collected in a survey of two different visits to a carbonated orange juice factory. In each visit, samples were collected, six times, from seven points in the production chain. ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2005.02542.x

    authors: Pina C,Teixeiró P,Leite P,Villa M,Belloch C,Brito L

    更新日期:2005-01-01 00:00:00

  • Rumen bacteria at work: bioaugmentation strategies to enhance biogas production from cow manure.

    abstract:AIMS:To investigate the effects of different bioaugmentation strategies for enhancing the biogas production from cow manure and evaluate microbial community patterns. METHODS AND RESULTS:Co-inoculation with cow rumen fluid and cow rumen-derived enriched microbial consortia was evaluated in anaerobic batch tests at 36°...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.13668

    authors: Ozbayram EG,Akyol Ç,Ince B,Karakoç C,Ince O

    更新日期:2018-02-01 00:00:00

  • Immune responses of chickens inoculated with recombinant Lactobacillus expressing the haemagglutinin of the avian influenza virus.

    abstract:AIMS:To develop a safe, effective and convenient vaccine for the prevention of highly pathogenic avian influenza (HPAI), we have successfully constructed a recombinant lactobacillus (LDL17-pH) that expresses the foreign HPAI protein, haemagglutinin 1 (HA1 ). METHODS AND RESULTS:The mucosal and systemic immune response...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.12325

    authors: Wang Z,Yu Q,Fu J,Liang J,Yang Q

    更新日期:2013-12-01 00:00:00

  • Comparison of microbial communities in four different composting processes as evaluated by denaturing gradient gel electrophoresis analysis.

    abstract:AIMS:We aimed to systematically understand the composting processes by a comparison of microbial communities during four full-scale composting processes. METHODS AND RESULTS:Microbial communities during the four different full-scale composting processes were analysed by denaturing gradient gel electrophoresis combined...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.2003.01949.x

    authors: Ishii K,Takii S

    更新日期:2003-01-01 00:00:00

  • Analysis of environmental Escherichia coli isolates for virulence genes using the TaqMan PCR system.

    abstract:AIMS:To assess the presence of virulence genes in environmental and foodborne Escherichia coli isolates using the TaqMan PCR system. METHODS AND RESULTS:Three TaqMan pathogen detection kits called O157:H7, StxI and StxII were used to investigate the presence of virulence genes in Escherichia coli isolates. All 54 food...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.2003.02023.x

    authors: Davis KC,Nakatsu CH,Turco R,Weagant SD,Bhunia AK

    更新日期:2003-01-01 00:00:00

  • Biocide use in the food industry and the disinfectant resistance of persistent strains of Listeria monocytogenes and Escherichia coli.

    abstract:AIMS:The aims of the project were threefold: to survey the use of disinfectants in the UK food industry; to assess the product and environmental microflora of selected food factories for the persistence of Listeria monocytogenes and Escherichia coli; and to determine the disinfectant resistance of any persistent strain...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:

    authors: Holah JT,Taylor JH,Dawson DJ,Hall KE

    更新日期:2002-01-01 00:00:00

  • Effects of environmental conditions on microbial proteolysis in a pork myofibril model system.

    abstract::A number of bacterial strains used for meat fermentations were screened for proteolytic activity. A strain of Micrococcus which was found to be proteolytic was evaluated for the effects of environmental conditions on its proteolytic activity against pork myofibrillar proteins using response surface methodology. Three ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.1999.00829.x

    authors: Kenneally PM,Fransen NG,Grau H,O'Neill EE,Arendt EK

    更新日期:1999-12-01 00:00:00

  • Changes in bacterial community during fermentative hydrogen and acid production from organic waste by thermophilic anaerobic microflora.

    abstract:AIMS:Changes in fermentation pattern during the treatment of organic wastes containing solid materials by thermophilic anaerobic microflora were investigated with respect to product formation and bacterial community structure during hydrogen production. METHODS AND RESULTS:Anaerobic microflora enriched from sludge com...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2006.02939.x

    authors: Ueno Y,Sasaki D,Fukui H,Haruta S,Ishii M,Igarashi Y

    更新日期:2006-08-01 00:00:00

  • RNA extraction from cheese for analysis of in situ gene expression of Lactococcus lactis.

    abstract:AIMS:The isolation of high-quality RNA from cheese is a prerequisite for analysis of in situ gene expression of dairy micro-organisms. METHODS AND RESULTS:A method for rapid isolation of bacterial cells from cheese using cold citrate buffer followed by mechanical cell disruption was developed. RNA was extracted from e...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2008.03869.x

    authors: Ulve VM,Monnet C,Valence F,Fauquant J,Falentin H,Lortal S

    更新日期:2008-11-01 00:00:00

  • Genotypic heterogeneity among Lactobacillus helveticus strains isolated from natural cheese starters.

    abstract::A total of 23 strains of Lactobacillus helveticus isolated from natural whey starter cultures for Italian hard cheeses and three reference strains were characterized by plasmid profiling, ribotyping and random amplified polymorphic DNA (RAPD) fingerprinting. The data showed an interesting strain heterogeneity in natur...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.1998.853464.x

    authors: Giraffa G,De Vecchi P,Rossi P,Nicastro G,Fortina MG

    更新日期:1998-09-01 00:00:00

  • Response to high-pressure, low-temperature treatment in vegetables: determination of survival rates of microbial populations using flow cytometry and detection of peroxidase activity using confocal microscopy.

    abstract::Application of high hydrostatic pressure (200, 300, 350 and 400 MPa) at 5 degrees C for 30 min to different micro-organisms, including Gram-positive and Gram-negative bacteria, moulds and yeasts, proved to be more effective in inactivating these organisms than treatments at 20 degrees C for 10 min and at 10 degrees C ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.1999.00701.x

    authors: Arroyo G,Sanz PD,Préstamo G

    更新日期:1999-03-01 00:00:00

  • Sorbitol-fermenting bifidobacteria as indicators of diffuse human faecal pollution in estuarine watersheds.

    abstract::Sorbitol fermenting bifidobacteria were evaluated as indicators of non-point source human faecal pollution to three sub-estuaries with elevated faecal coliform densities. Human-specific bifidobacteria correlated with identifiable human sanitary deficiencies in feeder streams to estuarine creeks in two of three watersh...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.1999.00845.x

    authors: Rhodes MW,Kator H

    更新日期:1999-10-01 00:00:00

  • Soil microbiota respond to green manure in organic vineyards.

    abstract:AIMS:The aim of this work was to investigate the effects of biodynamic management with and without the addition of green manure, in comparison with organic management, on the microbiota in vineyards soil. METHODS AND RESULTS:High throughput sequencing was used to compare the taxonomic structure of the soil bacterial a...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.13606

    authors: Longa CMO,Nicola L,Antonielli L,Mescalchin E,Zanzotti R,Turco E,Pertot I

    更新日期:2017-12-01 00:00:00

  • Use of bacteriophage endolysin EL188 and outer membrane permeabilizers against Pseudomonas aeruginosa.

    abstract:AIMS:To select and evaluate an appropriate outer membrane (OM) permeabilizer to use in combination with the highly muralytic bacteriophage endolysin EL188 to inactivate (multi-resistant) Pseudomonas aeruginosa. METHODS AND RESULTS:We tested the combination of endolysin EL188 and several OM permeabilizing compounds on ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2010.04931.x

    authors: Briers Y,Walmagh M,Lavigne R

    更新日期:2011-03-01 00:00:00

  • Pseudomonas aeruginosa biofilm disruption using microbial surfactants.

    abstract:AIMS:To establish the ability of the rhamnolipids biosurfactants from Pseudomonas aeruginosa, in the presence and absence of caprylic acid and ascorbic acid, to disrupt bacterial biofilms, compared with the anionic alkyl sulphate surfactant Sodium dodecyl sulphate (SDS). METHODS AND RESULTS:Pseudomonas aeruginosa ATCC...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.13049

    authors: Díaz De Rienzo MA,Stevenson PS,Marchant R,Banat IM

    更新日期:2016-04-01 00:00:00

  • Development of a novel triplex PCR assay for the detection and differentiation of thermophilic species of Campylobacter using 16S-23S rDNA internal transcribed spacer (ITS) region.

    abstract:AIM:Campylobacter species are significantly implicated in human gastrointestinal infections. Of 20 species of Campylobacter, C. jejuni, C. coli and C. lari have been considered as the most important causative agents of human infections. In order to better understand the occurrence and epidemiology of these thermophilic...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2007.03511.x

    authors: Khan IU,Edge TA

    更新日期:2007-12-01 00:00:00

  • Bacterial community structure, compartmentalization and activity in a microbial fuel cell.

    abstract:AIMS:To characterize bacterial populations and their activities within a microbial fuel cell (MFC), using cultivation-independent and cultivation approaches. METHODS AND RESULTS:Electron microscopic observations showed that the fuel cell electrode had a microbial biofilm attached to its surface with loosely associated...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2006.02923.x

    authors: Kim GT,Webster G,Wimpenny JW,Kim BH,Kim HJ,Weightman AJ

    更新日期:2006-09-01 00:00:00

  • Identification of antimicrobial metabolites produced by a potential biocontrol Actinomycete strain A217.

    abstract:AIMS:To extract and identify the metabolites of strain A217 as well as its antifungal spectrum and control effect on various plant pathogens. METHODS AND RESULTS:Strain A217 was identified as a Streptomyces sp. which was most similar to Streptomyces lienomycini. An antimicrobial spectrum test indicated that strain A21...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.14548

    authors: He H,Hao X,Zhou W,Shi N,Feng J,Han L

    更新日期:2020-04-01 00:00:00

  • A disclosure gel for visual detection of live Bacillus anthracis spores.

    abstract:AIMS:To develop a gel formulation to trigger a visual signal for rapid disclosure of the location and extent of surface contamination with viable Bacillus anthracis spores. METHODS AND RESULTS:Methylumbelliferyl-α-d-glucopyranoside was combined with hyaluronic acid to produce a gel that could be applied to a surface a...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.14226

    authors: Robinson CV,Bishop AH

    更新日期:2019-06-01 00:00:00

  • Inhibition of multidrug-resistant Staphylococci by sodium chlorate and select nitro- and medium chain fatty acid compounds.

    abstract:AIMS:Determine the antimicrobial effects of 5 μmol ml-1 sodium chlorate, 9 μmol ml-1 nitroethane or 2-nitropropanol as well as lauric acid, myristic acid and the glycerol ester of lauric acid Lauricidin® , each at 5 mg ml-1 , against representative methicillin-resistant staphylococci, important mastitis- and opportunis...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.14232

    authors: Božić A,Anderson RC,Arzola-Alvarez C,Ruiz-Barrera O,Corral-Luna A,Castillo-Castillo Y,Arzola-Rubio A,Poole TL,Harvey RB,Hume ME,Beier RC,Nisbet DJ

    更新日期:2019-05-01 00:00:00

  • Trends, application and future prospectives of microbial carbonic anhydrase mediated carbonation process for CCUS.

    abstract::Growing industrialization and the desire for a better economy in countries has accelerated the emission of greenhouse gases (GHGs), by more than the buffering capacity of the earth's atmosphere. Among the various GHGs, carbon dioxide occupies the first position in the anthroposphere and has detrimental effects on the ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章,评审

    doi:10.1111/jam.13589

    authors: Bhagat C,Dudhagara P,Tank S

    更新日期:2018-02-01 00:00:00

  • Isolation and characterization of antifungal compound from Lactobacillus plantarum KCC-10 from forage silage with potential beneficial properties.

    abstract:AIMS:The purpose of this study was to isolate, identify and characterize an antifungal compound from Lactobacillus plantarum KCC-10 from forage silage with potential beneficial properties. METHODS AND RESULTS:The 16S rRNA gene-based phylogenetic affiliation was determined using bioinformatic tools and identified as La...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.12319

    authors: Valan Arasu M,Jung MW,Ilavenil S,Jane M,Kim DH,Lee KD,Park HS,Hur TY,Choi GJ,Lim YC,Al-Dhabi NA,Choi KC

    更新日期:2013-11-01 00:00:00

  • Vertical profiles of community and activity of methanotrophs in landfill cover soils of different age.

    abstract:AIM:Aerobic CH4 oxidation is an important process controlling CH4 release from landfills to the atmosphere. The aim of this study was to investigate the link between CH4 oxidation activity and methanotrophs abundance and diversity in landfill cover soils of different age. METHODS AND RESULTS:Among the three investigat...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.12263

    authors: Kong JY,Su Y,Zhang QQ,Bai Y,Xia FF,Fang CR,He R

    更新日期:2013-09-01 00:00:00