Molecular diagnosis of Arcobacter and Campylobacter in diarrhoeal samples among Portuguese patients.

Abstract:

:The present study was conducted to investigate the prevalence and diversity of Arcobacter and Campylobacter spp. in 298 stool samples of patients with diarrhoea, collected from 22 Portuguese hospitals, between September and November 2012. Detection of Arcobacter and Campylobacter spp. was performed using molecular-based detection techniques, such as real-time fluorescence resonance energy transfer PCR, species-specific PCR, and sequencing of amplified PCR products. Overall, 1.3% of the samples were positive for Arcobacter butzleri and 0.3% for Arcobacter cryaerophilus. Campylobacter spp. were found in 31.9% of diarrhoeic faeces. Campylobacter jejuni and Campylobacter concisus were the most prevalent species (13.7% and 8.0%, respectively). The prevalence of Arcobacter and Campylobacter spp. was significantly different between children and adults (39.7% versus 22.8%, P = 0.003). We underline the high prevalence of these pathogens in diarrhoeal samples among Portuguese patients, with particular relevance in the paediatric age group.

authors

Ferreira S,Júlio C,Queiroz JA,Domingues FC,Oleastro M

doi

10.1016/j.diagmicrobio.2013.11.021

subject

Has Abstract

pub_date

2014-03-01 00:00:00

pages

220-5

issue

3

eissn

0732-8893

issn

1879-0070

pii

S0732-8893(13)00634-2

journal_volume

78

pub_type

杂志文章,多中心研究
  • Optimization of LipL32 PCR assay for increased sensitivity in diagnosing leptospirosis.

    abstract::Early diagnosis of leptospirosis in humans is critical with regard to initiation of appropriate treatment; however, the gold standard serological test cannot detect antibodies until nearly a week after symptom onset. PCR has been shown to be sensitive and specific in the early phase of leptospirosis. Previously, we de...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2015.03.024

    authors: Galloway RL,Hoffmaster AR

    更新日期:2015-07-01 00:00:00

  • Use of 2 pneumococcal common protein real-time polymerase chain reaction assays in healthy children colonized with Streptococcus pneumoniae.

    abstract::Polymerase chain reaction (PCR) offers promise in pneumococcal diagnostics, but whether nasopharyngeal carriage causes false-positive results in people colonized with Streptococcus pneumoniae is unknown. We found in serum no positive samples for pneumococcal DNA in 100 carriers and noncarriers using 2 different real-t...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2010.09.006

    authors: Rouphael N,Steyn S,Bangert M,Sampson JS,Adrian P,Madhi SA,Klugman KP,Ades EW

    更新日期:2011-08-01 00:00:00

  • Effectual detection of group B streptococci with reduced penicillin susceptibility (PRGBS) by commercially available methicillin-resistant-Staphylococcus aureus (MRSA)-selective agar.

    abstract::We evaluated the feasibility and efficacy of a commercially available methicillin-resistant Staphylococcus aureus (MRSA)-selective agar, chromID(™) MRSA, to detect group B streptococci with reduced penicillin susceptibility (PRGBS) in this study. The results showed 72.4% (21/29) sensitivity and 98.4% (60/61) specifici...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2016.04.018

    authors: Fukigai S,Morimoto M,Kimura K,Doyama Y,Miyazaki A,Kamiya C,Banno H,Morishima E,Onoda T,Nagano N,Jin W,Wachino JI,Yamada K,Arakawa Y

    更新日期:2016-07-01 00:00:00

  • The current and future impact of antimicrobial resistance among nosocomial bacterial pathogens.

    abstract::The selection of drug-resistant microorganisms has generally been associated with the widespread use of antimicrobial agents. The emergence of these antimicrobial resistance has an undesirable impact that often severely limits the use of these drugs that could have otherwise been identified as "drugs of first choice."...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章,评审

    doi:

    authors: Jones RN

    更新日期:1992-02-01 00:00:00

  • Enterobacterial repetitive intergenic consensus PCR is a useful tool for typing Mycobacterium chelonae and Mycobacterium abscessus isolates.

    abstract::Outbreaks of rapidly growing mycobacterium (RGM) infections are increasingly being reported worldwide. Information about genetic relatedness of isolates obtained during outbreaks can provide opportunities for prompt intervention. Pulsed-field gel electrophoresis (PFGE) is expensive, time consuming, and labor intensive...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2006.01.006

    authors: Sampaio JL,Viana-Niero C,de Freitas D,Höfling-Lima AL,Leão SC

    更新日期:2006-06-01 00:00:00

  • Evaluation of a rapid antigen detection point-of-care test for respiratory syncytial virus and influenza in a pediatric hospitalized population in the Netherlands.

    abstract::This pilot study evaluates the diagnostic performance of Sofia RSV Fluorescent Immunoassay Analyzer (FIA) and Sofia Influenza A + B FIA for rapid detection of respiratory syncytial virus and influenza A and B. Sofia had a lower-than-expected sensitivity for all viruses and a high rate of false-positive results for inf...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2014.08.010

    authors: Bruning AH,van Dijk K,van Eijk HW,Koen G,van Woensel JB,Kruisinga FH,Pajkrt D,Wolthers KC

    更新日期:2014-12-01 00:00:00

  • A multianalyte Dot-ELISA for simultaneous detection of malaria, Chagas disease, and syphilis-specific IgG antibodies.

    abstract::A multianalyte Dot-enzyme-linked immunosorbent assay (Dot-ELISA-Multi) with Trypanosoma cruzi epimastigote alkaline extract (EAE), trypomastigote excreted-secreted antigen (TESA), recombinant protein derived from 19-kDa C-terminal region of the Plasmodium vivax merozoite surface protein 1 (PvMSP1(19)), Plasmodium falc...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2006.12.011

    authors: Coelho JS,Soares IS,Lemos EA,Jimenez MC,Kudó ME,Moraes SL,Ferreira AW,Sanchez MC

    更新日期:2007-06-01 00:00:00

  • Comparative in vitro pharmacodynamics of imipenem and meropenem against ATCC strains of Escherichia coli, Staphylococcus aureus and Bacteroides fragilis.

    abstract::We evaluated the pharmacodynamics of imipenem and meropenem, utilizing time-kill studies over a concentration/MIC (C/MIC) range of 0.0625-1024 for E. coli ATCC 35218 (EC) and S. aureus ATCC 29213 (SA) and from 0.125-512 for B. fragilis ATCC 25285 (BF). Area under the time-kill curves were converted to percent response...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/s0732-8893(00)00219-4

    authors: White RL,Friedrich LV,Manduru M,Mihm LB,Bosso JA

    更新日期:2001-01-01 00:00:00

  • Activity of faropenem against resistant isolates of Streptococcus pneumoniae.

    abstract::An in vitro study of the activity of 9 agents against 181 US pediatric isolates of Streptococcus pneumoniae identified imipenem and faropenem as the most active agents. Overall, faropenem was the most potent oral agent inhibiting 98% of isolates at 1 microg/mL. ...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/s0732-8893(01)00283-8

    authors: Black JA,Moland ES,Chartrand SA,Thomson KS

    更新日期:2001-09-01 00:00:00

  • Bronchoalveolar lavage for the diagnosis of disseminated toxoplasmosis in AIDS patients.

    abstract::The usefulness of cell culture of bronchoalveolar lavage fluid for the diagnosis of toxoplasmosis in immunocompromised hosts has not been stressed previously. We report an acquired immunodeficiency syndrome patient with disseminated toxoplasmosis who was diagnosed by isolation of Toxoplasma gondii in cell cultures fro...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/0732-8893(95)00142-8

    authors: Gadea I,Cuenca M,Benito N,Pereda JM,Soriano F

    更新日期:1995-08-01 00:00:00

  • Use of cerebrospinal fluid shunt for the management of elevated intracranial pressure in a patient with active AIDS-related cryptococcal meningitis.

    abstract::Persistently elevated intracranial pressure (ICP) is one of the most accurate predictors of a poor prognosis in patients with AIDS-related cryptococcal meningitis. We present a severe case of persistent cryptococcal meningitis in a patient with advanced AIDS, complicated by elevation of ICP. A ventriculoperitoneal shu...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/s0732-8893(99)00025-5

    authors: Mylonakis E,Merriman NA,Rich JD,Flanigan TP,Walters BC,Tashima KT,Mileno MD,van der Horst CM

    更新日期:1999-06-01 00:00:00

  • Norepinephrine augmented in vitro growth of uropathogenic E. coli in Type 2 diabetes mellitus and its suppression by silodosin (alpha blocker).

    abstract::Norepinephrine is secreted under conditions of stress in humans. The ability of bacteria to sense mammalian hormone may have a role in propagation of infection. The present study investigated the effect of norepinephrine on in vitro growth of uropathogenic E. coli (UPEC) and the effect of silodosin on norepinephrine-i...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2018.05.005

    authors: Gond DP,Singh S,Agrawal NK

    更新日期:2018-10-01 00:00:00

  • Review and reassessment of dosing schedules for cefotaxime in selected medical indications.

    abstract::Cefotaxime, the first widely used "third-generation" cephalosporin, has established efficacy against a variety of serious bacterial pathogens. Some of the initial clinical studies in the United States using this agent employed large doses of the compound, up to 12 g/day, for adults. In contrast, however, initial Europ...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章,评审

    doi:10.1016/0732-8893(95)00103-h

    authors: Young LS

    更新日期:1995-05-01 00:00:00

  • In vitro activity of ciprofloxacin, levofloxacin, and trovafloxacin, alone and in combination with beta-lactams, against clinical isolates of Pseudomonas aeruginosa, Stenotrophomonas maltophilia, and Burkholderia cepacia.

    abstract::We tested three fluoroquinolones (ciprofloxacin, levofloxacin, and trovafloxacin), each combined with each of four beta-lactams (cefoperazone, ceftriaxone, imipenem, and meropenem) for synergy against clinical isolates of nosocomial strains of Pseudomonas aeruginosa, Stenotrophomonas maltophilia, and Burkholderia cepa...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/s0732-8893(98)00126-6

    authors: Isenberg HD,Alperstein P,France K

    更新日期:1999-02-01 00:00:00

  • Hepatitis C virus core antigen in the management of patients treated with new direct-acting antivirals.

    abstract::We evaluated the utility of Architect core antigen assay® Abbott Diagnostics (HCVAg) for monitoring patients with HCV infection and compared to HCV-RNA quantification (Cobas Ampliprep TaqMan-Roche Diagnostics). Samples from 262 patients were studied. Mean baseline HCV RNA and HCVAg levels were similar for responders (...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2017.06.006

    authors: Arboledas JCA,Guerrero IP,Rodríguez MJB,Martos ET,Pérez AB,León CC,Sierra Sánchez JF,Prieto MDL,Porcuna NC,Mochón MDO,Macías J,de la Iglesia Salgado A,Granger JR,Fernández MD,Lozano IG,Ramírez ER,Rivero A,Del Carmen Loz

    更新日期:2017-09-01 00:00:00

  • Specificity of low anti-Toxoplasma IgG titers with IMx and AxSYM Toxo IgG assays.

    abstract::Low antibody titers (3 to 6 IU/mL) detected by IMx and AxSYM Toxo IgG assays in serum samples from 264 pregnant women were confirmed by the dye test and a high-sensitivity agglutination test in, respectively, 98.5% and 95.6% of cases, attesting a premunition of these patients. ...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/s0732-8893(98)00060-1

    authors: Cimon B,Marty P,Morin O,Bessières MH,Marx-Chemla C,Gay-Andrieu F,Thulliez P

    更新日期:1998-09-01 00:00:00

  • Rapid diagnosis of tuberculosis by identification of Antigen 85 in mycobacterial culture system.

    abstract::The standard culture for identification of Mycobacterium tuberculosis takes a long time to perform. We introduce here a method for fast identification of M. tuberculosis in mycobacterial culture system. Antibodies to Antigen (Ag) 85 of M. tuberculosis were produced and subsequently used to develop enzyme-linked immuno...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2013.11.028

    authors: Phunpae P,Chanwong S,Tayapiwatana C,Apiratmateekul N,Makeudom A,Kasinrerk W

    更新日期:2014-03-01 00:00:00

  • Treatment of non-life-threatening methicillin-resistant Staphylococcus aureus infections with alternative antimicrobial agents: a 2-year retrospective review.

    abstract::The emergence of methicillin-resistant Staphylococcus aureus (MRSA) infections has created a need for additional antimicrobial options. Patients at the Minneapolis Veterans Affairs Medical Center, Minneapolis, MN, who received alternative (nonvancomycin, nonlinezolid) therapy for MRSA infections from January 2004 to D...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2008.10.001

    authors: Drekonja DM,Traynor LM,DeCarolis DD,Crossley KB,Johnson JR

    更新日期:2009-02-01 00:00:00

  • Development and evaluation of genotypic assays for the detection and characterization of enterotoxigenic Escherichia coli.

    abstract::We developed and evaluated a method to genotypically identify enterotoxigenic Escherichia coli (ETEC) and to characterize these organisms with respect to 18 of 21 known colonization factors (CFs). The method, which is based on polynucleotide DNA-DNA colony hybridization, includes a pooled toxin probe assay to identify...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/s0732-8893(02)00504-7

    authors: Steinsland H,Valentiner-Branth P,Grewal HM,Gaastra W,Mølbak K K,Sommerfelt H

    更新日期:2003-02-01 00:00:00

  • Detection of human enterovirus and human parechovirus (HPeV) genotypes from clinical stool samples: polymerase chain reaction and direct molecular typing, culture characteristics, and serotyping.

    abstract::Molecular (polymerase chain reaction [PCR]) methods are increasingly used to detect and type human enteroviruses (HEVs) and parechoviruses (HPeV). Here, we assessed their value in comparison to virus culture and serotyping for detection and typing of HEV and HPeV in stool samples from hospitalized patients. By use of ...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2010.05.016

    authors: Benschop K,Minnaar R,Koen G,van Eijk H,Dijkman K,Westerhuis B,Molenkamp R,Wolthers K

    更新日期:2010-10-01 00:00:00

  • Antimicrobial activity of ceftobiprole, a novel anti-methicillin-resistant Staphylococcus aureus cephalosporin, tested against contemporary pathogens: results from the SENTRY Antimicrobial Surveillance Program (2005-2006).

    abstract::Ceftobiprole is a 1st-in-class anti-methicillin-resistant Staphylococcus aureus (MRSA) extended-spectrum cephalosporin currently in clinical trials for the treatment of complicated skin and skin structure infections (cSSSIs) and nosocomial pneumonia. This agent is also active against other prominent Gram-positive and ...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2008.02.008

    authors: Fritsche TR,Sader HS,Jones RN

    更新日期:2008-05-01 00:00:00

  • A quick and cost-effective method for diagnosing disseminated histoplasmosis in children.

    abstract::The examination of fecal mucus for detecting yeast cells of Histoplasma capsulatum has proved to be a useful tool for diagnosing disseminated histoplasmosis in paediatric patients in a study of 13 cases carried out in Ecuador. ...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2006.10.016

    authors: Vega W,Almeida R,Miño G,Gené J,Guarro J

    更新日期:2007-04-01 00:00:00

  • Use of INNO-LIPA assay for rapid identification of mycobacteria.

    abstract::Using 106 clinical isolates of mycobacteria, we showed that INNO-LIPA Mycobacteria assay is an excellent tool to rapidly identify the most frequently isolated nontuberculous mycobacteria, in one procedure. It may be used as an additional technique to AccuProbe assay, which remains the fastest and the cheapest tool for...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/s0732-8893(03)00042-7

    authors: Lebrun L,Gönüllü N,Boutros N,Davoust A,Guibert M,Ingrand D,Ghnassia JC,Vincent V,Doucet-Populaire F

    更新日期:2003-06-01 00:00:00

  • Antimicrobial susceptibility of Streptococcus pyogenes in Central, Eastern, and Baltic European Countries, 2005 to 2006: the cefditoren surveillance program.

    abstract::The in vitro activity of penicillin, ampicillin, cefditoren, cefotaxime, erythromycin, clarithromycin, and levofloxacin against 763 clinical isolates of Streptococcus pyogenes was determined. Clinically significant isolates collected from November 2005 to December 2006 in the Czech Republic, Slovakia, Hungary, Poland,...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2008.12.018

    authors: Gracia M,Díaz C,Coronel P,Gimeno M,García-Rodas R,Rodríguez-Cerrato V,del Prado G,Huelves L,Ruiz V,Naves PF,Ponte MC,Granizo JJ,Soriano F

    更新日期:2009-05-01 00:00:00

  • Susceptibility of 100 blood isolates of Pseudomonas aeruginosa to 19 antipseudomonal antibiotics: old and new.

    abstract::The in vitro susceptibility of 19 antipseudomonal antibiotics, old and new, were tested against 100 blood isolates of Pseudomonas aeruginosa. The isolates were taken from consecutive bacteremic patients hospitalized in nine Pittsburgh hospitals from 1983 to 1984. Twelve percent of isolates tested were tobramycin-resis...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/0732-8893(87)90027-7

    authors: Korvick J,Yu VL,Hilf M

    更新日期:1987-06-01 00:00:00

  • Serological response to plasmid-encoded antigens in children and adults with shigellosis.

    abstract::The immunological response to plasmid-encoded antigens of virulent Shigella was determined in Thai children less than 4 yr of age and in Thai adults by immunoblot analysis and ELISA. Forty-two percent (8/19) of Thai children and 4% (1/22) of Thai adults with shigellosis developed a greater than or equal to 4-fold rise...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/0732-8893(88)90043-0

    authors: Echeverria P,Hanchalay S,Taylor DN

    更新日期:1988-06-01 00:00:00

  • An evaluation of a leukocyte esterase/nitrite test strip and a bioluminescence assay for detection of bacteriuria.

    abstract::A leukocyte esterase/nitrite (Chemstrip LNTM) and a bioluminescence assay (LumacTM) were evaluated for detection of bacteriuria in 1,000 urine specimens. Both devices provided high predictive negative values (95.4-97.8%); however, false-negative values at levels of bacteriuria greater than or equal to 10(4) CFU/ml wer...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/0732-8893(85)90023-9

    authors: Hughes JG,Snyder RJ,Washington JA 2nd

    更新日期:1985-03-01 00:00:00

  • Insufficient diagnostic accuracy of imported serological kits for Helicobacter pylori infection in Japanese population.

    abstract::Although there are many reports of the high diagnostic accuracy of commercially available serologic kits for Helicobacter pylori infection in Western countries, they rarely has been investigated in oriental population. Accordingly we examined their usefulness in 492 Japanese patients with dyspeptic symptoms. Diagnosti...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 临床试验,杂志文章

    doi:10.1016/s0732-8893(99)00143-1

    authors: Miwa H,Kikuchi S,Ohtaka K,Kobayashi O,Ogihara A,Hojo M,Nagahara A,Sato N

    更新日期:2000-02-01 00:00:00

  • Design and implementation of a protocol for the detection of Legionella in clinical and environmental samples.

    abstract::Our laboratory has developed a novel real-time polymerase chain reaction (PCR) assay for the detection of Legionella pneumophila and differentiation from other Legionella spp. in clinical and environmental samples. The 23S rRNA gene was used as a target to detect all Legionella spp., and the mip gene was targeted for ...

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章

    doi:10.1016/j.diagmicrobio.2008.05.004

    authors: Nazarian EJ,Bopp DJ,Saylors A,Limberger RJ,Musser KA

    更新日期:2008-10-01 00:00:00

  • Sparfloxacin worldwide in vitro literature: isolate data available through 1994.

    abstract::Sparfloxacin is a piperazinyl, cyclopropyl-fluoroquinolone with broad-spectrum antibacterial activity. Compared to other quinolones, sparfloxacin displays improved activity against a variety of pathogens including Staphylococcus, Streptococcus, Enterococcus, Chlamydia, Mycoplasma, Ureaplasma, and Mycobacteria species....

    journal_title:Diagnostic microbiology and infectious disease

    pub_type: 杂志文章,评审

    doi:10.1016/s0732-8893(96)00121-6

    authors: Cohen MA,Yoder SL,Talbot GH

    更新日期:1996-06-01 00:00:00