Definitive assignment by multigenome analysis of the gammaproteobacterial genus Thermithiobacillus to the class Acidithiobacillia.

Abstract:

:The class Acidithiobacillia was established using multiprotein phylogenetic analysis of all the available genomes of the genus Acidithiobacillus (comprising Family I, the Acidithiobacillaceae, of the Acidithiobacillales, the order created for Bergey's Manual of Systematic Bacteriology), and for representative genomes of all available bacterial orders. The Acidithiobacillales contain a second family, the Thermithiobacillaceae, represented by Thermithiobacillus tepidarius, and created on the basis of nearest neighbour 16S ribosomal RNA gene sequence similarities. This could not be included in the original multiprotein analysis as no genome sequence for Thermithio bacillus was available. The publication of the genome sequence of Thermithiobacillus tepidarius in 2013 has enabled phylogenetic assessment of this organism by comparative multigenome analysis. This shows definitively that Thermithiobacillus is a member of the class Acidithiobacillia, distinct from the Acidithiobacillus genus, and confirms it to represent a second family within the Acidithiobacillia.

journal_name

Pol J Microbiol

authors

Hudson CM,Williams KP,Kelly DP

subject

Has Abstract

pub_date

2014-01-01 00:00:00

pages

245-7

issue

2

eissn

1733-1331

issn

2544-4646

journal_volume

63

pub_type

杂志文章
  • Performance Evaluation of Different Commercial Serological Kits for Diagnosis of Acute Hepatitis E Viral Infection.

    abstract::Clinical diagnosis of hepatitis E viral (HEV) infection mainly relies on serological assays, and the current status of misdiagnoses regarding HEV infection is uncertain. In this study, patients with acute HEV infection were tested for anti-HEV IgM and IgG, a HEV antigen (Ag), and viral loads (HEV RNA). Serology was pe...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.33073/pjm-2020-025

    authors: Zhang Q,Zong X,Li D,Lin J,Li L

    更新日期:2020-09-01 00:00:00

  • Carbapenem-resistant Acinetobacter baumannii from Air and Patients of Intensive Care Units.

    abstract::To understand the molecular epidemiology and antibiotic resistance of air and clinical isolates of Acinetobacter baumannii , the intensive care unit settings of a hospital in Northern China were surveyed in 2014. Twenty non-duplicate A. baumannii isolates were obtained from patients and five isolates of airborne A. ba...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.21307/pjm-2018-040

    authors: Jiang M,Mu Y,Li N,Zhang Z,Han S

    更新日期:2018-01-01 00:00:00

  • Methanogenic diversity studies within the rumen of Surti buffaloes based on methyl coenzyme M reductase A (mcrA) genes point to Methanobacteriales.

    abstract::Methane emissions from ruminant livestock are considered to be one of the more potent forms of greenhouse gases contributing to global warming. Many strategies to reduce emissions are targeting the methanogens that inhabit the rumen, but such an approach can only be successful if it targets all the major groups of rum...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Singh KM,Pandya PR,Parnerkar S,Tripathi AK,Ramani U,Koringa PG,Rank DN,Joshi CG,Kothari RK

    更新日期:2010-01-01 00:00:00

  • Enzymatic Activity of Prototheca zopfii Strains Isolated from Cows with Mastitis.

    abstract::Bovine mastitis caused by Prototheca spp. can be a disease of high significance because of economic losses and the potential risk to public health. The aim of our study was to evaluate enzymatic activity of Prototheca zopfii. For this study, we used 15 P. zopfii strains previously isolated from cows with clinical and ...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Krukowski H,Lisowski A,Nowakowicz-Dębek B,Wlazło Ł

    更新日期:2012-09-28 00:00:00

  • Application of a real-time PCR method for Salmonella spp., Escherichia coli, Staphylococcus aureus and Clostridium perfringens detection in water samples.

    abstract::The diagnostic assessment of water sanitary state is based mainly on the cultivation of bacteria retained on membrane filters. However classical microbiology methods have a lot of disadvantages. More and more frequently, rapid detection and identification of pathogens present in water is based on molecular biology tec...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Rozwadowska B,Albertyńska M,Hudzik G,Okła H,Jasik KP,Słodki J

    更新日期:2013-01-01 00:00:00

  • Probable Interspecies Transfer of the bla(VIM-4) Gene between Enterobacter cloacae and Klebsiella pneumoniae in a Single Infant Patient.

    abstract::We report the interspecies transfer of the bla(VLM-4) gene in MBL-producing Enterobacter cloacae and Klebsiella pneumoniae isolates from a newborn patient who had received meropenem therapy. We show evidence that gene bla(VIM-4) was transmitted as a part of the class-1 integron on a ca. -90 kb conjugative plasmid. Hig...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.5604/17331331.1185239

    authors: Piekarska K,Zacharczuk K,Rzeczkowska M,Wołkowicz T,Januszkiewicz A,Podsiadły E,Demkow U,Gierczyński R

    更新日期:2015-01-01 00:00:00

  • Beta-glucanase productivity improvement via cell immobilization of recombinant Escherichia coli cells in different matrices.

    abstract::The studies have been performed to analyze the production of beta-glucanase by a recombinant strain of Escherichia coli immobilized in different matrices. Porous sintered glass SIRAN, Ceramic supporting matrices and Broken Pumice stone as well as SIRAN Raschig-rings were examined for the immobilization of whole bacter...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Beshay U,El-Enshasy H,Ismail IM,Moawad H,Abd-El-Ghany S

    更新日期:2011-01-01 00:00:00

  • Beta-glucuronidase and Beta-glucosidase activity in stool specimens of children with inflammatory bowel disease.

    abstract::The aim of the study was to analyze the differences in the activity of beta-glucuronidase and beta-glucosidase in stool specimens of children with Inflammatory Bowel Diseases (IBD) and healthy subjects. The disease activity was determined according to the PCDAI scale (Crohn disease) and Truelove-Witts scale (Ulcerativ...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Mroczyńska M,Galecka M,Szachta P,Kamoda D,Libudzisz Z,Roszak D

    更新日期:2013-01-01 00:00:00

  • Antibiotic susceptibility and molecular characterisation of Proteus mirabilis isolates in hospitals from the West Pomeranian area of Poland.

    abstract::Proteus mirabilis isolates (n = 177), collected between 1996 and 2000 in four hospitals in the West Pomeranian area of Poland, were characterized by antibiotype and pulsed-field gel electrophoresis (PFGE). The selected isolates were collected from different wards (intensive care unit, surgery, internal medicine, and u...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Maczyńska I,Giedrys-Kalemba S

    更新日期:2007-01-01 00:00:00

  • The effect of acid adaptation conditions on heat resistance of Escherichia coli O157: H7.

    abstract::The objective of this study was to determine the effect of acid adaptation conditions on heat resistance of E. coli O157: H7 932. E. coli O157: H7 was adapted to acid by exposing the cells to pH 4.5 (2h), pH 5.0 (1 h), and pH 5.5 (1 h) in tryptic soy broth. D and z values of the acid adapted and control cultures at 54...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Tosun H,Gönül SA

    更新日期:2005-01-01 00:00:00

  • Metallo-Beta-Lactamase Producing Pseudomonas aeruginosa in a Healthcare Setting in Alexandria, Egypt.

    abstract::Pseudomonas aeruginosa has emerged as a major healthcare associated pathogen that creates a serious public health disaster in both developing and developed countries. In this work we aimed at studying the occurrence of metallo-beta-lactamase (MBL) producing P. aeruginosa in a healthcare setting in Alexandria, Egypt. T...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.5604/01.3001.0010.4855

    authors: Abaza AF,El Shazly SA,Selim HSA,Aly GSA

    更新日期:2017-09-27 00:00:00

  • Molecular epidemiology of Q fever in Poland.

    abstract::Coxiella burnetii is the etiologic agent of Q fever, a worldwide distributed zoonosis, accountable for serious health problem both for humans and animals. The exposure to C. burnetii infected animals and their products is the main risk factor for Q fever in humans. Several outbreaks of Q fever have been described in P...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Chmielewski T,Sidi-Boumedine K,Duquesne V,Podsiadly E,Thiéry R,Tylewska-Wierzbanowska S

    更新日期:2009-01-01 00:00:00

  • Bioactive Compounds of Pseudoalteromonas sp. IBRL PD4.8 Inhibit Growth of Fouling Bacteria and Attenuate Biofilms of Vibrio alginolyticus FB3.

    abstract::Biofouling is a phenomenon that describes the fouling organisms attached to man-made surfaces immersed in water over a period of time. It has emerged as a chronic problem to the oceanic industries, especially the shipping and aquaculture fields. The metal-containing coatings that have been used for many years to preve...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.21307/pjm-2019-003

    authors: Supardy NA,Ibrahim D,Mat Nor SR,Noordin WNM

    更新日期:2019-01-01 00:00:00

  • Genetic diversity among Bacillus anthracis, Bacillus cereus and Bacillus thuringiensis strains using repetitive element polymorphism-PCR.

    abstract::Repetitive element polymorphism-PCR (REP-PCR) is one of the tools that has been used to elucidate genetic diversity of related microorganisms. Using the MB1 primer, REP-PCR fingerprints from 110 Bacillus strains within the "B. cereus group" have identified eighteen distinct categories, while other more distantly relat...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Brumlik MJ,Bielawska-Drózd A,Zakowska D,Liang X,Spalletta RA,Patra G,Delvecchio VG

    更新日期:2004-01-01 00:00:00

  • Expiration Date Prediction of Biocontrol Agent Prepared with Bacillus subtilis B579 Using the Accelerated Aging Method.

    abstract::The expiration date of biopesticidal products is an essential feature of their use and storage. In the present work, the expiration date of biocontrol agent was predicted using the accelerated aging method. The available bacteria in Bacillus subtilis B579 biocontrol agent were 3.7 ± 0.2 × 1011 CFU/g. It is calculated ...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.5604/17331331.1227672

    authors: Zheng Y,Jiao X,Chen F,Wang X,Wang M

    更新日期:2017-01-02 00:00:00

  • An Improve Protocol for PCR Using LM1 and LM2 Primers for Listeria monocytogenes Detection in Food Matrices.

    abstract::Several studies have observed that a conventional PCR protocol using primers LM1 and LM2 for the identification of gene hlyA Listeria monocytogenes generates non-specific PCR amplifications and false positives. For this reason in this study, we provide a modified PCR protocol that improves the specificity of the LM1 a...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.5604/01.3001.0010.7869

    authors: Godínez-Oviedo A,Nava GM,Arvizu-Medrano SM,Hernández-Iturriaga M

    更新日期:2017-07-06 00:00:00

  • Apicomplexan parasites: environmental contamination and transmission.

    abstract::The Apicomplexa are a diverse group of intracellular parasitic protists. The majority of species from the classes Coccidea, Haemosporea and Piroplasmea are responsible for widespread diseases of humans and domestic animals. Oocysts of these parasites can persist for long periods of time in the environment (i.e. in wat...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章,评审

    doi:

    authors: Siński E,Behnke JM

    更新日期:2004-01-01 00:00:00

  • Tick-borne infections as a cause of heart transplantation.

    abstract::Many bacterial species can be a cause of various heart diseases, such as: Borrelia burgdorferi sensu lato, Coxiella burnetii and Bartonella spp. The aim of the present studies was to establish if any tick-borne infections can contribute to serious heart disorders resulting in the need for heart transplantation. Myocar...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Maczka I,Chmielewski T,Walczak E,Rózański J,Religa G,Tylewska-Wierzbanowska S

    更新日期:2011-01-01 00:00:00

  • Molecular epidemiology of Salmonella enterica serovar Enteritidis strains by pulsed-field gel electrophoresis isolated in the Slovak Republic.

    abstract::A total 44 isolates of S. enterica serovar Enteritidis (S. Enteritidis) belonged to three different phage types (PTs) 9a, 13a, 25 were analyzed by the technique of pulsed-field gel electrophoresis (PFGE). Thirty and three strains were from two outbreaks (central and southern regions of the Slovak Republic PTs 13a, 25)...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Majtánová L,Szaboová M,Majtán V

    更新日期:2004-01-01 00:00:00

  • The occurrence and comparative phenotypic characteristics of Staphylococcus spp. from healthy and diseased, household and shelter dogs, based on routine biochemical diagnostic methods.

    abstract::To determine the staphylococcal colonization pattern in healthy and diseased dogs, living in two particular environments, a number of microbiological samples were taken. Overall, twenty dogs, either healthy or with infected skin lesions, were examined. In each case bacterial swabs were collected from the nasal mucosa,...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Kasprowicz A,Białecka A,Białecka J,Godzisz I,Barabasz W,Jaworska O,Małachowa N,Miedzobrodzki J

    更新日期:2011-01-01 00:00:00

  • Evaluation of a Salmonella Strain Isolated from Honeybee Gut as a Potential Live Oral Vaccine Against Lethal Infection of Salmonella Typhimurium.

    abstract::In this research, Salmonella species were isolated from the animal, insect and human enteric sources in Faisalabad, Punjab, Pakistan. These species were characterized by different microbiological and molecular techniques including polymerase chain reaction (PCR) by amplification of the 16S rRNA gene. Furthermore, sequ...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.21307/pjm-2019-017

    authors: Zafar H,Rahman SU,Ali S,Javed MT

    更新日期:2019-01-01 00:00:00

  • Cytokine Levels in the In Vitro Response of T Cells to Planktonic and Biofilm Corynebacterium amycolatum.

    abstract::Unravelling of the interplay between the immune system and non-diphtheria corynebacteria would contribute to understanding their increasing role as medically important microorganisms. We aimed at the analysis of pro- (TNF, IL-1β, IL-6, IL-8, and IL-12p70) and anti-inflammatory (IL-10) cytokines produced by Jurkat T ce...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.33073/pjm-2019-045

    authors: Olender A,Bogut A,Magryś A,Tabarkiewicz J

    更新日期:2019-12-01 00:00:00

  • Identification of Pathogenicity of Yersinia enterocolitica in Pig Tonsils Using the Real-Time PCR.

    abstract::The application of DNA-based methods enables to identify Yersinia enterocolitica carrying the ail-gene with a greater sensitivity compared to culture methods and biochemical tests used for detection of pathogenic Y. enterocolitica in animal and food samples. In this study, 100 samples of pig tonsils were examined, amo...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.21307/pjm-2018-023

    authors: Stachelska MA

    更新日期:2018-06-30 00:00:00

  • Antimicrobial resistance of Helicobacter pylori clinical strains in the last 10 years.

    abstract::In the present work primary antimicrobial resistance was analyzed in clinical H. pylori strain isolates from adult patients from Polish Wielkopolska region within the last 10 years. Drug sensitivity was evaluated in a total of 142 H. pylori isolates, with 66 strains originating from years 1997/1998 forming group 1 and...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Andrzejewska E,Szkaradkiewicz A,Karpiński T

    更新日期:2009-01-01 00:00:00

  • Evaluation of the Carba NP Test for the Detection of Carbapenemase Activity in Bacteroides Species.

    abstract::We evaluated the usefulness of the Carba NP test for rapid detection of carbapenemase activity in Bacteroides spp. The minimum inhibitory concentration (MIC) for imipenem was determined with gradient test strips, and cfiA gene was investigated by polymerase chain reaction for 27 clinical Bacteroides spp. isolates. Car...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:10.5604/01.3001.0011.6148

    authors: Akyar I,Ayas M,Karatuna O,Besli Y

    更新日期:2018-03-09 00:00:00

  • Inorganic phosphorus and nitrogen modify composition and diversity of microbial communities in water of mesotrophic lake.

    abstract::The effects of inorganic nutrients (N, P) enrichment of mesotrophic lake water on changes in bacterial and protistan (heterotrophic nanoflagellates and ciliates) communities compositions were studied in the mesocosm experiment. Phosphorus (PO4(3-)) and nitrogen (NH4+) alone and in combination were added to three types...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Chróst RJ,Adamczewski T,Kalinowska K,Skowrońska A

    更新日期:2009-01-01 00:00:00

  • Synthesis and antimicrobial activities of some quaternary morpholinium chlorides.

    abstract::The synthesis and antimicrobial activity of 31 morpholinium chlorides, divided into five series depending on the substituents attached to the nitrogen atom, N-carboxyalkyl-morpholinium chlorides (1a-e), N-carbalkoxymethyl-N-methyl-morpholinium chlorides (2a-f), N-carbethoxymethyl-N-alkyl-morpholinium chlorides (3a-g),...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Brycki B,Dega-Szafran Z,Mirska I

    更新日期:2010-01-01 00:00:00

  • The effect of nanosilver on pigments production by Fusarium culmorum (W. G. Sm.) Sacc.

    abstract::A disk-diffusion method experiment assessed the impact of nanosilver on production of secondary metabolites (pigments) by the Fusarium culmorum fungus. Nanosilver colloidal particles in water have been obtained by the use of a method based on high voltage electric arcs between silver electrodes. The silver nanoparticl...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Kasprowicz MJ,Gorczyca A,Frandsen RJ

    更新日期:2013-01-01 00:00:00

  • Emerging linezolid-resistant, vancomycin resistant Enterococcus faecium from a patient of a haematological unit in Poland.

    abstract::The oxazolidinone antimicrobial, linezolid, has been approved for the treatment of infections caused by various gram-positive bacteria, including vancomycin-resistant enterococci (VRE). This is the first report on isolation of a linezolid resistant, vancomycin-resistant Enterococcus faecium (LRVREF) strain in Poland, ...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Krawczyk B,Samet A,Bronk M,Hellmann A,Kur J

    更新日期:2004-01-01 00:00:00

  • Antibacterial activity of honey from stingless honeybees (Hymenoptera; Apidae; Meliponinae).

    abstract::The aim of the study was to examine antibacterial activity of the honey of stingless honeybees (Meliponinae). An agar well diffusion assay demonstrated that many honey samples of stingless honeybees inhibited the growth of test strains of Staphylococcus aureus, Enterococcus faecalis, Escherichia coli and Pseudomonas a...

    journal_title:Polish journal of microbiology

    pub_type: 杂志文章

    doi:

    authors: Temaru E,Shimura S,Amano K,Karasawa T

    更新日期:2007-01-01 00:00:00