Characterization of Third-Generation-Cephalosporin-Resistant Shiga Toxin-Producing Strains of Escherichia coli O157:H7 in Japan.

Abstract:

:We isolated Shiga toxin-producing Escherichia coli O157:H7 strains resistant to third-generation cephalosporins. The resistant strains harbored blaCMY-2, a plasmid-mediated AmpC β-lactamase. Genotyping of isolates revealed the possible spread of this problematic bacterium. Results suggested the importance of the investigation and surveillance of enterobacteria with plasmids harboring blaCMY-2.

journal_name

J Clin Microbiol

authors

Kawahara R,Seto K,Taguchi M,Nakajima C,Kumeda Y,Suzuki Y

doi

10.1128/JCM.01263-15

subject

Has Abstract

pub_date

2015-09-01 00:00:00

pages

3035-8

issue

9

eissn

0095-1137

issn

1098-660X

pii

JCM.01263-15

journal_volume

53

pub_type

杂志文章
  • Mycobacterium avium subspecies paratuberculosis infection in cases of irritable bowel syndrome and comparison with Crohn's disease and Johne's disease: common neural and immune pathogenicities.

    abstract::Mycobacterium avium subsp. paratuberculosis causes Johne's disease, a systemic infection and chronic inflammation of the intestine that affects many species, including primates. Infection is widespread in livestock, and human populations are exposed. Johne's disease is associated with immune dysregulation, with involv...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01371-07

    authors: Scanu AM,Bull TJ,Cannas S,Sanderson JD,Sechi LA,Dettori G,Zanetti S,Hermon-Taylor J

    更新日期:2007-12-01 00:00:00

  • Single-step multiplex PCR assay for characterization of New World Leishmania complexes.

    abstract::We have developed a PCR assay for one-step differentiation of the three complexes of New World Leishmania (Leishmania braziliensis, Leishmania mexicana, and Leishmania donovani). This multiplex assay is targeted to the spliced leader RNA (mini-exon) gene repeats of these organisms and can detect all three complexes si...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.36.7.1989-1995.1998

    authors: Harris E,Kropp G,Belli A,Rodriguez B,Agabian N

    更新日期:1998-07-01 00:00:00

  • Determination of parallelism and nonparallelism in bioassay dilution curves.

    abstract::There is a lack of consensus among investigators who use a variety of immunoassay techniques (e.g., enzyme-linked immunosorbent assay [ELISA] and radioimmunoassay) regarding the protocols for describing and forming standard reference or calibration curves and interpolating serum antibody concentrations. This confounds...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.32.10.2441-2447.1994

    authors: Plikaytis BD,Holder PF,Pais LB,Maslanka SE,Gheesling LL,Carlone GM

    更新日期:1994-10-01 00:00:00

  • Acetylene reduction (dinitrogen fixation) by clinical isolates of Klebsiella pneumoniae.

    abstract::Freshly isolated clinical strains of Klebsiella were tested for the ability to fix dinitrogen by the acetylene reduction assay. Ability to detect this trait was markedly affected by cultural conditions. When the test was run at 37 degrees C in the presence of yeast extract (50 mg/liter), only 1.6% of the organisms wer...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:

    authors: Chambers CA,Silver WS

    更新日期:1977-11-01 00:00:00

  • Epidemiology of enterovirus 71 in the Netherlands, 1963 to 2008.

    abstract::The incidence of enterovirus 71 (EV71) infection has greatly increased in the Asian Pacific region since 1997. Several large outbreaks, caused by different subgenogroups of EV71, occurred with high rates of morbidity and a substantial number of deaths. In 2007, 58 cases of EV71 infection requiring hospitalization were...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00507-09

    authors: van der Sanden S,Koopmans M,Uslu G,van der Avoort H,Dutch Working Group for Clinical Virology.

    更新日期:2009-09-01 00:00:00

  • Identification of a p28 gene in Ehrlichia ewingii: evaluation of gene for use as a target for a species-specific PCR diagnostic assay.

    abstract::PCR was used to amplify a 537-bp region of an Ehrlichia ewingii gene encoding a homologue of the 28-kDa major antigenic protein (P28) of Ehrlichia chaffeensis. The E. ewingii p28 gene homologue was amplified from DNA extracted from whole blood obtained from four humans and one canine with confirmed cases of infection....

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.39.11.3871-3876.2001

    authors: Gusa AA,Buller RS,Storch GA,Huycke MM,Machado LJ,Slater LN,Stockham SL,Massung RF

    更新日期:2001-11-01 00:00:00

  • Rapid presumptive identification of black-pigmented gram-negative anaerobic bacteria by using 4-methylumbelliferone derivatives.

    abstract::A rapid method for presumptive identification of black-pigmented gram-negative anaerobic rods was developed. Using filter paper spot tests for indole production, sialidase, alpha-glucosidase, beta-glucosidase, alpha-fucosidase, and trypsinlike enzyme activities, 100% of Porphyromonas gingivalis, Prevotella intermedia,...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.29.9.1955-1958.1991

    authors: Moncla BJ,Braham P,Rabe LK,Hillier SL

    更新日期:1991-09-01 00:00:00

  • Rapid and specific detection of the pap, afa, and sfa adhesin-encoding operons in uropathogenic Escherichia coli strains by polymerase chain reaction.

    abstract::Adhesin-encoding operons (pap, sfa/foc, and afa) have been shown to be prevalent in Escherichia coli strains associated with urinary tract infections. A quick and sensitive assay to identify these operons was developed by using the polymerase chain reaction (PCR). Three pairs of 25-mer primers were defined from the se...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.30.5.1189-1193.1992

    authors: Le Bouguenec C,Archambaud M,Labigne A

    更新日期:1992-05-01 00:00:00

  • Detection of chikungunya virus antigen by a novel rapid immunochromatographic test.

    abstract::Chikungunya fever is a mosquito-borne disease of key public health importance in tropical and subtropical countries. Although severe joint pain is the most distinguishing feature of chikungunya fever, diagnosis remains difficult because the symptoms of chikungunya fever are shared by many pathogens, including dengue f...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.02033-14

    authors: Okabayashi T,Sasaki T,Masrinoul P,Chantawat N,Yoksan S,Nitatpattana N,Chusri S,Morales Vargas RE,Grandadam M,Brey PT,Soegijanto S,Mulyantno KC,Churrotin S,Kotaki T,Faye O,Faye O,Sow A,Sall AA,Puiprom O,Chaichana P,

    更新日期:2015-02-01 00:00:00

  • Screening of urine cultures by three automated systems.

    abstract::A study was conducted to compare three automated systems and the Gram stain for their ability to detect significant bacteriuria. A total of 1,000 urine specimens were evaluated by Autobac MTS (General Diagnostics), Auto Microbic system (AMS; Vitek Systems, Inc.), and MS-2 (Abbott Laboratories) and compared with a semi...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.15.3.468-474.1982

    authors: Pezzlo MT,Tan GL,Peterson EM,de la Maza LM

    更新日期:1982-03-01 00:00:00

  • Pneumococcus with the "6E" cps Locus Produces Serotype 6B Capsular Polysaccharide.

    abstract::Genetic studies of serogroup 6 isolates ofStreptococcus pneumoniaeidentified putative serotype 6E. Although its capsular polysaccharide structure has not been elucidated, putative serotype 6E is described in an increasing number of studies as a potentially new serotype. We show here that SPEC6B, which is widely used a...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.03194-15

    authors: Burton RL,Geno KA,Saad JS,Nahm MH

    更新日期:2016-04-01 00:00:00

  • Updating the PGMY primers and probes for improved detection of HPV68a: validation of version 2 of the PGMY-CHUV assay.

    abstract::HPV68a is not efficiently detected by PCR with the PGMY primers. Version 2 of the PGMY-CHUV assay (PGv2) was developed from version 1 (PGv1) to evaluate HPV68-discordant results with the Anyplex II HPV28 assay. We now report that PGv2 is significantly more sensitive than PGv1 for HPV68a and as sensitive and specific f...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01950-14

    authors: Estrade C,Sahli R

    更新日期:2014-11-01 00:00:00

  • Detection of human immunodeficiency virus type 1 (HIV-1) in urine cell pellets from HIV-1-seropositive individuals.

    abstract::Fresh urine pellets from human immunodeficiency virus type 1 (HIV-1)-seropositive individuals were examined for the presence of the HIV-1 genomic sequence and gene products. By using the polymerase chain reaction technique, HIV-1 DNA proviral sequences were detected in 53 of 80 (66.25%) fresh urine pellets from HIV-1-...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.30.5.1051-1055.1992

    authors: Li JJ,Huang YQ,Poiesz BJ,Zaumetzger-Abbot L,Friedman-Kien AE

    更新日期:1992-05-01 00:00:00

  • Detection of Mycoplasma pulmonis in cilia-associated respiratory bacillus isolates and in respiratory tracts of rats by nested PCR.

    abstract::To improve the detection of Mycoplasma pulmonis contamination of isolates of cilia-associated respiratory (CAR) bacillus, we developed a nested PCR method using primers for 16S rRNA gene sequences. Of 140 samples of 16 different CAR bacillus isolates, 73 (52%) were inhibitory in the first PCR, as indicated by the abse...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.35.7.1667-1670.1997

    authors: Schoeb TR,Dybvig K,Keisling KF,Davidson MK,Davis JK

    更新日期:1997-07-01 00:00:00

  • Impact of routine real-time PCR testing of imported malaria over 4 years of implementation in a clinical laboratory.

    abstract::In clinical laboratories, diagnosis of imported malaria is commonly performed by microscopy. However, the volume of specimens is generally low and maintaining proficiency in reading blood smears, particularly at the species level, is challenging in this setting. To address this problem, the Provincial Laboratory for P...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00195-13

    authors: Shokoples S,Mukhi SN,Scott AN,Yanow SK

    更新日期:2013-06-01 00:00:00

  • Serotyping Cryptococcus neoformans by immunofluorescence.

    abstract::Four serotypes of Cryptococcus neoformans designated A, B, C, and D are currently recognized. Although an agglutination test is most often used to serotype C. neoformans in cultures, this test is not appropriate for typing the fungus in fixed tissues. A study to prepare fluorescent-antibody reagents for typing C. neof...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.14.3.313-317.1981

    authors: Kaplan W,Bragg SL,Crane S,Ahearn DG

    更新日期:1981-09-01 00:00:00

  • Improvement of PCR for detection of Opisthorchis viverrini DNA in human stool samples.

    abstract::Opisthorchis viverrini is an important food-borne trematode in Southeast Asia. The infection causes significant morbidity in terms of hepatobiliary diseases and cholangiocarcinoma. The aim of this study was to improve the sensitivity of the PCR-based diagnosis of O. viverrini infection. A new fecal DNA extraction prot...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01323-07

    authors: Duenngai K,Sithithaworn P,Rudrappa UK,Iddya K,Laha T,Stensvold CR,Strandgaard H,Johansen MV

    更新日期:2008-01-01 00:00:00

  • Immunoelectrophoresis for detection of polysaccharides in immune complexes.

    abstract::A procedure for detecting pneumococcal capsular polysaccharides in immune complexes is described. Separation of antigen from immune complexes is achieved by electrophoresis at 56 degrees C. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:

    authors: Coonrod JD,Leach RP

    更新日期:1978-08-01 00:00:00

  • Extended incubation of culture plates improves recovery of Bordetella spp.

    abstract::Extended incubation of culture plates was studied to see if the recovery of Bordetella spp. from nasopharyngeal swabs could be improved. Forty-eight Bordetella isolates were recovered from 103 children (overall positive-culture rate, 46.6%) who met the clinical case definition of pertussis. Seven of 44 (16%) B. pertus...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.34.6.1563-1564.1996

    authors: Katzko G,Hofmeister M,Church D

    更新日期:1996-06-01 00:00:00

  • Rapid detection of bovine viral diarrhea virus by polymerase chain reaction.

    abstract::The polymerase chain reaction was used to detect genomic sequences of the positive-stranded RNA of bovine viral diarrhea virus (BVDV), a member of the family Togaviridae. Using a set of 20-bp primers located within the conserved 3' region of the BVDV genome, we were able to consistently amplify a 205-bp target sequenc...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.29.3.578-582.1991

    authors: Lopez OJ,Osorio FA,Donis RO

    更新日期:1991-03-01 00:00:00

  • Comparison of automated Difco ESP blood culture system with biphasic BBL Septi-Chek system for detection of bloodstream infections in pediatric patients.

    abstract::We compared the Difco ESP 384 blood culture system with the pediatric Septi-Chek system for the detection of bloodstream infections in pediatric patients. A total of 10,762 blood culture sets included an ESP aerobic bottle and a Septi-Chek bottle. From these cultures, a total of 278 organisms classified as probable pa...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.33.5.1084-1088.1995

    authors: Welby PL,Keller DS,Storch GA

    更新日期:1995-05-01 00:00:00

  • Multicenter evaluation of the BD Max GBS assay for detection of group B streptococci in prenatal vaginal and rectal screening swab specimens from pregnant women.

    abstract::A new integrated extraction and real-time PCR-based system for the detection of group B streptococci in antepartum screening samples enriched in Lim broth was compared to the CDC-recommended culture method. The BD Max GBS assay exhibited acceptable sensitivity (95%) and specificity (96.7%) compared to those of the cul...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00947-10

    authors: Riedlinger J,Beqaj SH,Milish MA,Young S,Smith R,Dodd M,Hankerd RE,Lebar WD,Newton DW

    更新日期:2010-11-01 00:00:00

  • Dot immunobinding assay for simultaneous detection of specific immunoglobulin G antibodies to measles virus, mumps virus, and rubella virus.

    abstract::A dot immunobinding assay was used to detect antibodies to measles virus, mumps virus, and rubella virus antigens. Filter paper soaked with serum or whole blood was directly applied to the antigen-coated nitrocellulose sheets. The test was easy to perform, and its results agreed very well with those obtained by standa...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.31.3.717-719.1993

    authors: Condorelli F,Ziegler T

    更新日期:1993-03-01 00:00:00

  • Evidence for subclinical influenza A(H1N1)pdm09 virus infection among dogs in Guangdong Province, China.

    abstract::During 2012, we identified sampled dogs with elevated levels of antibodies (≥1:40) against A(H1N1)pdm09 virus by using a hemagglutination inhibition (HI) assay (seroprevalence, 24.7%) and a microneutralization (MN) assay (seroprevalence, 10.8%). These high seroprevalences of A(H1N1)pdm09 among dogs without clinical si...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.03522-13

    authors: Su S,Chen J,Jia K,Khan SU,He S,Fu X,Hong M,Sun L,Qi W,Gray GC,Li S

    更新日期:2014-05-01 00:00:00

  • Fungal infection in patients with serpiginous choroiditis or acute zonal occult outer retinopathy.

    abstract::The etiologies of a number of retinopathies, including serpiginous choroiditis and acute zonal occult outer retinopathy (AZOOR), remain uncertain. Recently, we provided evidence that AZOOR is caused by Candida famata infection. The purpose of this article was to investigate the presence of fungal infection in five pat...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.02605-06

    authors: Pisa D,Ramos M,García P,Escoto R,Barraquer R,Molina S,Carrasco L

    更新日期:2008-01-01 00:00:00

  • Comparison of agar dilution, broth microdilution, E-test, disk diffusion, and automated Vitek methods for testing susceptibilities of Enterococcus spp. to vancomycin.

    abstract::An evaluation was undertaken to determine the optimal method for testing the susceptibilities of 100 clinical isolates and two reference strains of Enterococcus spp. to vancomycin in vitro. Six testing methods were studied by using the following media and incubation times: agar screen with the Synergy Quad Plate (Reme...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.35.12.3258-3263.1997

    authors: Kohner PC,Patel R,Uhl JR,Garin KM,Hopkins MK,Wegener LT,Cockerill FR 3rd

    更新日期:1997-12-01 00:00:00

  • Serosubtypes and PorA types of Neisseria meningitidis serogroup B isolated in Brazil during 1997--1998: overview and implications for vaccine development.

    abstract::Meningococcal disease caused by N. meningitidis serogroup B (MenB) has been endemic in Brazil since 1997. In this study, we determined the prevalence of serosubtypes of MenB isolated in 10 Brazilian states and the Federal District during 1997 and 1998 and investigated the extent of PorA VR sequence variation among the...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.39.8.2897-2903.2001

    authors: Sacchi CT,Lemos AP,Popovic T,De Morais JC,Whitney AM,Melles CE,Brondi LM,Monteiro LM,Paiva MV,Solari CA,Mayer LW

    更新日期:2001-08-01 00:00:00

  • Immunofluorescence method for detection of Ebola virus immunoglobulin g, using HeLa cells which express recombinant nucleoprotein.

    abstract::A novel recombinant baculovirus which expresses Ebola virus (EBO) nucleoprotein (NP) under the control of the cytomegalovirus immediate-early promoter was constructed. HeLa cells abortively infected with the baculovirus expressed EBO NP, and this was used as an immunofluorescent (IF) antigen to detect EBO immunoglobul...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.39.2.776-778.2001

    authors: Saijo M,Niikura M,Morikawa S,Kurane I

    更新日期:2001-02-01 00:00:00

  • Campylobacter fetus subsp. fetus in homosexual males.

    abstract::Campylobacter fetus subsp. fetus was isolated from the stools of two homosexual males. One was asymptomatic at the time of isolation. The other presented with diarrhea. Both isolates were initially grown at 42 degrees C. This organism should be included among the list of organisms that are found in homosexual males. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.18.4.999-1000.1983

    authors: Devlin HR,McIntyre L

    更新日期:1983-10-01 00:00:00

  • Interstitial pneumonitis and coinfection of human herpesvirus 6 and Pneumocystis carinii in a patient with hypogammaglobulinemia.

    abstract::Human herpesvirus 6 (HHV-6) has occasionally been associated with cases of interstitial pneumonitis, mainly in individuals with impaired cellular immunity. Here we report for the first time severe interstitial pneumonitis with simultaneous HHV-6 and Pneumocystis carinii infections in the lung tissue of a young patient...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.42.11.5415-5418.2004

    authors: Vuorinen T,Kotilainen P,Lautenschlager I,Kujari H,Krogerus L,Oksi J

    更新日期:2004-11-01 00:00:00