Small molecule inhibitors of bacterial transcription complex formation.

Abstract:

:Knoevenagel condensation was employed to generate a set of molecules potentially capable of inhibiting the RNA polymerase-σ70/σA interaction in bacteria. Synthesis was achieved via reactions between a variety of indole-7-carbaldehydes and rhodanine, N-allylrhodanine, barbituric acid or thiobarbituric acid. A library of structurally diverse compounds was examined by enzyme-linked immunosorbent assay (ELISA) to assess the inhibition of the targeted protein-protein interaction. Inhibition of bacterial growth was also evaluated using Bacillus subtilis and Escherichia coli cultures. The structure-activity relationship studies demonstrated the significance of particular structural features of the synthesized molecules for RNA polymerase-σ70/σA interaction inhibition and antibacterial activity. Docking was investigated as an in silico method for the further development of the compounds.

journal_name

Bioorg Med Chem Lett

authors

Wenholz DS,Zeng M,Ma C,Mielczarek M,Yang X,Bhadbhade M,Black DSC,Lewis PJ,Griffith R,Kumar N

doi

10.1016/j.bmcl.2017.08.036

subject

Has Abstract

pub_date

2017-09-15 00:00:00

pages

4302-4308

issue

18

eissn

0960-894X

issn

1464-3405

pii

S0960-894X(17)30835-1

journal_volume

27

pub_type

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