Whole-genome sequencing identifies emergence of a quinolone resistance mutation in a case of Stenotrophomonas maltophilia bacteremia.

Abstract:

:Whole-genome sequences for Stenotrophomonas maltophilia serial isolates from a bacteremic patient before and after development of levofloxacin resistance were assembled de novo and differed by one single-nucleotide variant in smeT, a repressor for multidrug efflux operon smeDEF. Along with sequenced isolates from five contemporaneous cases, they displayed considerable diversity compared against all published complete genomes. Whole-genome sequencing and complete assembly can conclusively identify resistance mechanisms emerging in S. maltophilia strains during clinical therapy.

authors

Pak TR,Altman DR,Attie O,Sebra R,Hamula CL,Lewis M,Deikus G,Newman LC,Fang G,Hand J,Patel G,Wallach F,Schadt EE,Huprikar S,van Bakel H,Kasarskis A,Bashir A

doi

10.1128/AAC.01723-15

subject

Has Abstract

pub_date

2015-11-01 00:00:00

pages

7117-20

issue

11

eissn

0066-4804

issn

1098-6596

pii

AAC.01723-15

journal_volume

59

pub_type

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