Drivers of Macrofungi Community Structure Differ between Soil and Rotten-Wood Substrates in a Temperate Mountain Forest in China.

abstract：:Root-colonizing bacteria can support plant growth and help fend off pathogens. It is clear that such bacteria benefit from plant-derived carbon, but it remains ambiguous why they invest in plant-beneficial traits. We suggest that selection via protist predation contributes to recruitment of plant-beneficial traits in ...

journal_title：Frontiers in microbiology

authors： Amacker N,Gao Z,Agaras BC,Latz E,Kowalchuk GA,Valverde CF,Jousset A,Weidner S

更新日期：2020-12-15 00:00:00

abstract：:An estimated 17% of cancers worldwide are associated with infectious causes. The extent and biological significance of viral presence/infection in actual tumor samples is generally unknown but could be measured using human transcriptome (RNA-seq) data from tumor samples. We present an open source bioinformatics pipeli...

journal_title：Frontiers in microbiology

authors： Bhuvaneshwar K,Song L,Madhavan S,Gusev Y

更新日期：2018-06-05 00:00:00

abstract：:The family Reoviridae is one of the largest virus families with genomes composed of 9-12 double-stranded RNA segments. It includes members infecting organisms from protists to humans. It is well known that reovirus genomes are prone to various types of genome alterations including intragenic rearrangement and reassort...

journal_title：Frontiers in microbiology

authors： Tanaka T,Eusebio-Cope A,Sun L,Suzuki N

更新日期：2012-06-01 00:00:00

abstract：:Food grade micro- or nano-carrier systems (NCS) are being developed to improve the controlled release of antimicrobial agents. To augment the stability of liposomal NCS and to overcome the limitations associated with the use of free bacteriocin (nisin) in the food system, multi-component colloidosomes (MCCS) were deve...

journal_title：Frontiers in microbiology

authors： Niaz T,Shabbir S,Noor T,Abbasi R,Raza ZA,Imran M

更新日期：2018-01-15 00:00:00

abstract：:Genes that are constitutively expressed across multiple environmental stimuli are crucial to quantifying differentially expressed genes, particularly when employing quantitative reverse transcriptase polymerase chain reaction (RT-qPCR) assays. However, the identification of these potential reference genes in non-model...

journal_title：Frontiers in microbiology

authors： Alexander H,Jenkins BD,Rynearson TA,Saito MA,Mercier ML,Dyhrman ST

更新日期：2012-11-09 00:00:00

abstract：:Despite the importance of diversification rates in the study of prokaryote evolution, they have not been quantitatively assessed for the majority of microorganism taxa. The investigation of evolutionary patterns in prokaryotes constitutes a challenge due to a very scarce fossil record, limited morphological differenti...

journal_title：Frontiers in microbiology

authors： Sanglas A,Albarral V,Farfán M,Lorén JG,Fusté MC

更新日期：2017-02-08 00:00:00

abstract：:The efficiency of horizontal gene transfer, which contributes to acquisition and spread of antibiotic resistance and pathogenicity traits, depends on nucleotide sequence and different mismatch-repair (MMR) proteins participate in this process. To study how MutL and MutS MMR proteins regulate recombination across speci...

journal_title：Frontiers in microbiology

authors： Carrasco B,Serrano E,Martín-González A,Moreno-Herrero F,Alonso JC

更新日期：2019-02-13 00:00:00

abstract：:Alternaria brassicicola is a necrotrophic fungus causing black spot disease and is an economically important seed-borne pathogen of cultivated brassicas. Seed transmission is a crucial component of its parasitic cycle as it promotes long-term survival and dispersal. Recent studies, conducted with the Arabidopsis thali...

journal_title：Frontiers in microbiology

authors： N'Guyen GQ,Raulo R,Marchi M,Agustí-Brisach C,Iacomi B,Pelletier S,Renou JP,Bataillé-Simoneau N,Campion C,Bastide F,Hamon B,Mouchès C,Porcheron B,Lemoine R,Kwasiborski A,Simoneau P,Guillemette T

更新日期：2019-08-30 00:00:00

abstract：:Enterohaemorrhagic Escherichia coli, such as serotype O157:H7, are a leading cause of food-associated outbreaks. While the primary reservoir is associated with cattle, plant foods have been associated as sources of human infection. E. coli is able to grow in the tissue of food plants such as spinach. While fecal conta...

journal_title：Frontiers in microbiology

authors： NandaKafle G,Christie AA,Vilain S,Brözel VS

更新日期：2018-04-23 00:00:00

abstract：:Microorganisms play a significant role in the evolution and functioning of the eukaryotes with which they interact. Much of our understanding of beneficial host-microbe interactions stems from studying already established associations; we often infer the genotypic and environmental conditions that led to the existing ...

journal_title：Frontiers in microbiology

authors： Hoang KL,Morran LT,Gerardo NM

更新日期：2016-09-13 00:00:00

abstract：:The lack of therapeutic options to treat infections caused by multidrug-resistant (MDR) pathogens, especially Gram-negative bacteria, is apparent. Therefore, it is imperative to develop new strategies to address the problem of antimicrobial resistance. Repurposing non-antibiotic commercial drugs for antimicrobial ther...

journal_title：Frontiers in microbiology

authors： Domalaon R,Ammeter D,Brizuela M,Gorityala BK,Zhanel GG,Schweizer F

更新日期：2019-07-10 00:00:00

abstract：:To obtain full details of gut microbiota, including bacteria, fungi, bacteriophages, and helminths, in giant pandas (GPs), we created a comprehensive microbial genome database and used metagenomic sequences to align against the database. We delineated a detailed and different gut microbiota structures of GPs. A total ...

journal_title：Frontiers in microbiology

authors： Yang S,Gao X,Meng J,Zhang A,Zhou Y,Long M,Li B,Deng W,Jin L,Zhao S,Wu D,He Y,Li C,Liu S,Huang Y,Zhang H,Zou L

更新日期：2018-07-31 00:00:00

abstract：:Lactic acid bacteria (LAB) are the primary genera of the intestinal flora and have many probiotic functions. In the present study, Lactobacillus rhamnosus GG (LGG) ATCC 53103 was used to treat BALB/c mice. After LGG intervention, both low and high LGG doses were shown to improve the observed OTU, Chao1, ACE, and Shann...

journal_title：Frontiers in microbiology

authors： Shi CW,Cheng MY,Yang X,Lu YY,Yin HD,Zeng Y,Wang RY,Jiang YL,Yang WT,Wang JZ,Zhao DD,Huang HB,Ye LP,Cao X,Yang GL,Wang CF

更新日期：2020-12-17 00:00:00

abstract：:The term microbiome describes the genetic material encoding the various microbial populations that inhabit our body. Whilst colonization of various body niches (e.g., the gut) by dynamic communities of microorganisms is now universally accepted, the existence of microbial populations in other "classically sterile" loc...

journal_title：Frontiers in microbiology

authors： Whittle E,Leonard MO,Harrison R,Gant TW,Tonge DP

更新日期：2019-01-17 00:00:00

abstract：:A common feature of microbial colonization in deserts is biological soil crusts (BSCs), and these comprise a complex community dominated by Cyanobacteria. Rock substrates, particularly sandstone, are also colonized by microbial communities. These are separated by bare sandy soil that also supports microbial colonizati...

journal_title：Frontiers in microbiology

authors： Lee KC,Archer SD,Boyle RH,Lacap-Bugler DC,Belnap J,Pointing SB

更新日期：2016-09-26 00:00:00

abstract：:Grapevine downy mildew, caused by oomycete fungus Plasmopara viticola, is one of the most devastating diseases of grapes across the major production regions of the world. Although many putative effector molecules have been identified from this pathogen, the functions of the majority of these are still unknown. In this...

journal_title：Frontiers in microbiology

authors： Chen T,Liu R,Dou M,Li M,Li M,Yin X,Liu GT,Wang Y,Xu Y

更新日期：2020-04-21 00:00:00

abstract：:Microbial decomposition of organic matter is an essential process in the global carbon cycle. The soil bacteria Pseudopedobacter saltans and Flavobacterium johnsoniae are both able to degrade complex organic molecules, but it is not fully known how their membrane structures are adapted to their environmental niche. Th...

journal_title：Frontiers in microbiology

authors： Moore EK,Hopmans EC,Rijpstra WI,Sánchez-Andrea I,Villanueva L,Wienk H,Schoutsen F,Stams AJ,Sinninghe Damsté JS

更新日期：2015-06-29 00:00:00

abstract：:Despite numerous studies on marine prokaryotes, the vertical distribution patterns of bacterial community, either on the taxonomic composition or the functional structure, remains relatively unexplored. Using HiSeq-derived 16S rRNA data, the depth-related distribution patterns of taxonomic diversity and functional str...

journal_title：Frontiers in microbiology

authors： Wang M,Ma Y,Feng C,Cai L,Li W

更新日期：2020-09-10 00:00:00

abstract：:Microbial contamination has been a pervasive issue during the rice storage and triggers extensive researches. The metabolism of microorganisms was proved as an indicator to mirror the degree of microbial contamination. It is necessary to develop a scientific method to analyze the metabolism of rice microbial communiti...

journal_title：Frontiers in microbiology

authors： Ge Z,Du H,Gao Y,Qiu W

更新日期：2018-07-03 00:00:00

abstract：:The status of intestinal microbiota is a determinant of host health. However, the alteration of the gut microbiota caused by the innate immune response to virus infection is unclear. Caenorhabditis elegans and its natural virus Orsay provide an excellent model of host-virus interactions. We evaluated the intestinal mi...

journal_title：Frontiers in microbiology

authors： Guo Y,Xun Z,Coffman SR,Chen F

更新日期：2017-05-29 00:00:00

abstract：:Candida haemulonii is an emerging opportunistic pathogen resistant to most antifungal drugs currently used in clinical arena. Metal complexes containing 1,10-phenanthroline (phen) chelating ligands have well-established anti-Candida activity against different medically relevant species. This study utilized larvae of G...

journal_title：Frontiers in microbiology

authors： Gandra RM,McCarron P,Viganor L,Fernandes MF,Kavanagh K,McCann M,Branquinha MH,Santos ALS,Howe O,Devereux M

更新日期：2020-03-24 00:00:00

abstract：:Pockmarks are crater-like depression on the seafloor associated with hydrocarbon ascent through muddy sediments in continental shelves around the world. In this study, we examine the diversity and distribution of benthic microbial communities at shallow-water pockmarks adjacent to the Middle Adriatic Ridge. We integra...

journal_title：Frontiers in microbiology

authors： Giovannelli D,d'Errico G,Fiorentino F,Fattorini D,Regoli F,Angeletti L,Bakran-Petricioli T,Vetriani C,Yücel M,Taviani M,Manini E

更新日期：2016-06-17 00:00:00

abstract：:Genome duplication requires the coordinated activity of a multi-component machine, the replisome. In contrast to the background of metabolic diversity across the bacterial domain, the composition and architecture of the bacterial replisome seem to have suffered few changes during evolution. This immutability underline...

journal_title：Frontiers in microbiology

authors： Beattie TR,Reyes-Lamothe R

更新日期：2015-06-05 00:00:00

abstract：:Weaning stress renders piglets susceptible to pathogen infection, which leads to post-weaning diarrhea, a severe condition characterized by heavy diarrhea and mortality in piglets. Enterotoxigenic Escherichia coli (ETEC) is one of typical strains associated with post-weaning diarrhea. Thus, prevention and inhibition o...

journal_title：Frontiers in microbiology

authors： Wang J,Zeng Y,Wang S,Liu H,Zhang D,Zhang W,Wang Y,Ji H

更新日期：2018-06-26 00:00:00

abstract：:Babesia species are tick-borne intraerythrocytic protozoa that cause babesiosis in humans worldwide. No vaccine has yet proven effective against Babesia infection. Surface antigens of merozoites are involved in the invasion of erythrocytes by Babesia. Surface antigens may be presented by both babesial sporozoites and ...

journal_title：Frontiers in microbiology

authors： Man S,Fu Y,Guan Y,Feng M,Qiao K,Li X,Gao H,Cheng X

更新日期：2017-12-19 00:00:00

abstract：:Fusarium head blight (FHB) is a disease of cereal crops caused by trichothecene producing Fusarium species. Trichothecenes, macrocylicic fungal metabolites composed of three fused rings (A-C) with one epoxide functionality, are a class of mycotoxins known to inhibit protein synthesis in eukaryotic ribosomes. These tox...

journal_title：Frontiers in microbiology

authors： Foroud NA,Shank RA,Kiss D,Eudes F,Hazendonk P

更新日期：2016-08-17 00:00:00

abstract：:Obese individuals more frequently suffer from infections, as a result of increased susceptibility to a number of bacterial pathogens. Furthermore, obesity can alter antibiotic treatment efficacy due to changes in drug pharmacokinetics which can result in under-dosing. However, studies on the treatment of bacterial inf...

journal_title：Frontiers in microbiology

authors： Pětrošová H,Eshghi A,Anjum Z,Zlotnikov N,Cameron CE,Moriarty TJ

更新日期：2017-02-24 00:00:00

abstract：:Parvoviruses are a diverse group of viruses that are capable of infecting a wide range of animals. In this study, we report the discovery of a novel parvovirus, tilapia parvovirus HMU-HKU, in the fecal samples of crocodiles and intestines of tilapia in Hainan Province, China. The novel parvovirus was firstly identifie...

journal_title：Frontiers in microbiology

authors： Du J,Wang W,Chan JF,Wang G,Huang Y,Yi Y,Zhu Z,Peng R,Hu X,Wu Y,Zeng J,Zheng J,Cui X,Niu L,Zhao W,Lu G,Yuen KY,Yin F

更新日期：2019-12-05 00:00:00

abstract：:Reducing phenanthrene (PHE) in the environment is critical to ecosystem and human health. Biodegradation, biosorption, and the trans-membrane transport mechanism of PHE by a novel strain, Massilia sp. WF1, and an extensively researched model fungus, Phanerochaete chrysosporium were investigated in aqueous solutions. R...

journal_title：Frontiers in microbiology

authors： Gu H,Lou J,Wang H,Yang Y,Wu L,Wu J,Xu J

更新日期：2016-01-29 00:00:00

abstract：:Corynebacterium glutamicum, a soil-derived gram-positive actinobacterium, has been widely used for the production of biochemical molecules such as amino acids (i.e., L-glutamate and L-lysine), nucleic acids, alcohols, and organic acids. The metabolism of the bacterium has been engineered to increase the production of ...

journal_title：Frontiers in microbiology

authors： Lee MJ,Kim P

更新日期：2018-10-26 00:00:00