Biochemical interactions between LPS and LPS-binding molecules.

Abstract:

:Lipopolysaccharide (LPS), the major component of the outer membrane of Gram-negative bacteria, often pose a serious risk not only when delivered in the bloodstream but also in air, the environment and several industrial fields such as pharmaceutics or food. LPS is constituted of three regions; the O-specific chain, the core region and the lipid A, which is the responsible segment of the toxicity. Previous literature dealt with the study of lipid A, its potential ligands as well as the mechanisms of Lipid A interactions that, among other applications, establish the basis for detection methods such as Limulus Amebocyte Lysate (LAL) assays and emerging biosensoring techniques. However, quantifying LPS binding affinity is an urgent need that still requires thorough studies. In this context, this work reviews the molecules that bind LPS, highlighting quantitative affinity parameters. Moreover, state of the art methods to analyze the affinity and kinetics of lipid-ligand interactions are also reviewed and different techniques have been briefly described. Thus, first, we review existing information on LPS ligands, classifying them into three main groups and targeting the comparison of molecules in terms of their interaction affinities and, second, we establish the basis for further research aimed at the development of effective methods for LPS detection and removal.

journal_name

Crit Rev Biotechnol

authors

Basauri A,González-Fernández C,Fallanza M,Bringas E,Fernandez-Lopez R,Giner L,Moncalián G,de la Cruz F,Ortiz I

doi

10.1080/07388551.2019.1709797

subject

Has Abstract

pub_date

2020-05-01 00:00:00

pages

292-305

issue

3

eissn

0738-8551

issn

1549-7801

journal_volume

40

pub_type

杂志文章
  • Hooked on α-d-galactosidases: from biomedicine to enzymatic synthesis.

    abstract::α-d-Galactosidases (EC 3.2.1.22) are enzymes employed in a number of useful bio-based applications. We have depicted a comprehensive general survey of α-d-galactosidases from different origin with special emphasis on marine example(s). The structures of natural α-galactosyl containing compounds are described. In addit...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2014.949618

    authors: Bakunina IY,Balabanova LA,Pennacchio A,Trincone A

    更新日期:2016-01-01 00:00:00

  • Plants endophytes: unveiling hidden agenda for bioprospecting toward sustainable agriculture.

    abstract::Endophytic microbes are present in nearly all of the plant species known to date but how they enter and flourish inside a host plant and display multiple benefits like plant growth promotion (PGP), biodegradation, and stress alleviation are still unexplored. Until now, the majority of the research has been conducted a...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章

    doi:10.1080/07388551.2020.1808584

    authors: Dubey A,Malla MA,Kumar A,Dayanandan S,Khan ML

    更新日期:2020-12-01 00:00:00

  • Advanced technologies for improved expression of recombinant proteins in bacteria: perspectives and applications.

    abstract::Prokaryotic expression systems are superior in producing valuable recombinant proteins, enzymes and therapeutic products. Conventional microbial technology is evolving gradually and amalgamated with advanced technologies in order to give rise to improved processes for the production of metabolites, recombinant biophar...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2015.1084264

    authors: Gupta SK,Shukla P

    更新日期:2016-12-01 00:00:00

  • Developments in the study and applications of bacterial transformations of selenium species.

    abstract::Microbial bio-transformations of the essential trace element selenium are now recognized to occur among a wide variety of microorganisms. These transformations are used to convert this element into its assimilated form of selenocysteine, which is at the active center of a number of key enzymes, and to produce selenium...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章

    doi:10.1080/07388551.2020.1811199

    authors: Ojeda JJ,Merroun ML,Tugarova AV,Lampis S,Kamnev AA,Gardiner PHE

    更新日期:2020-12-01 00:00:00

  • Endophytic fungi: resource for gibberellins and crop abiotic stress resistance.

    abstract::The beneficial effects of endophytes on plant growth are important for agricultural ecosystems because they reduce the need for fertilizers and decrease soil and water pollution while compensating for environmental perturbations. Endophytic fungi are a novel source of bioactive secondary metabolites; moreover, recentl...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2013.800018

    authors: Khan AL,Hussain J,Al-Harrasi A,Al-Rawahi A,Lee IJ

    更新日期:2015-03-01 00:00:00

  • Endophytes, biotransforming microorganisms, and engineering microbial factories for triterpenoid saponins production.

    abstract::Triterpenoid saponins are structurally diverse secondary metabolites. They are the main active ingredient of many medicinal plants and have a wide range of pharmacological effects. Traditional production of triterpenoid saponins, directly extracted from cultivated plants, cannot meet the rapidly growing demand of phar...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章

    doi:10.1080/07388551.2020.1869691

    authors: Yao L,Wang J,He J,Huang L,Gao W

    更新日期:2021-01-20 00:00:00

  • Alternative carbohydrate pathways - enzymes, functions and engineering.

    abstract::Metabolic engineering is crucial in the development of production strains for platform chemicals, pharmaceuticals and biomaterials from renewable resources. The central carbon metabolism (CCM) of heterotrophs plays an essential role in the conversion of biomass to the cellular building blocks required for growth. Yet,...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章

    doi:10.1080/07388551.2020.1785386

    authors: Kopp D,Sunna A

    更新日期:2020-11-01 00:00:00

  • Homogeneous biocatalysis in organic solvents and water-organic mixtures.

    abstract::Biocatalysis in non-aqueous media has undergone tremendous development during the last decade, and numerous reactions have been introduced and optimized for synthetic applications. In contrast to aqueous enzymology, biotransformations in organic solvents offer unique industrially attractive advantages, such as: drasti...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:

    authors: Castro GR,Knubovets T

    更新日期:2003-01-01 00:00:00

  • Plant-pathogen interactions: toward development of next-generation disease-resistant plants.

    abstract::Briskly evolving phytopathogens are dire threats to our food supplies and threaten global food security. From the recent advances made toward high-throughput sequencing technologies, understanding of pathogenesis and effector biology, and plant innate immunity, translation of these means into new control tools is bein...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2015.1134437

    authors: Nejat N,Rookes J,Mantri NL,Cahill DM

    更新日期:2017-03-01 00:00:00

  • Metabolic engineering of l-leucine production in Escherichia coli and Corynebacterium glutamicum: a review.

    abstract::l-Leucine, as an essential branched-chain amino acid for humans and animals, has recently been attracting much attention because of its potential for a fast-growing market demand. The applicability ranges from flavor enhancers, animal feed additives and ingredients in cosmetic to specialty nutrients in pharmaceutical ...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1080/07388551.2019.1577214

    authors: Wang YY,Xu JZ,Zhang WG

    更新日期:2019-08-01 00:00:00

  • Enhancing mainstream nitrogen removal by employing nitrate/nitrite-dependent anaerobic methane oxidation processes.

    abstract::Due to serious eutrophication in water bodies, nitrogen removal has become a critical stage for wastewater treatment plants (WWTPs) over past decades. Conventional biological nitrogen removal processes are based on nitrification and denitrification (N/DN), and are suffering from several major drawbacks, including subs...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1080/07388551.2019.1598333

    authors: Liu T,Hu S,Guo J

    更新日期:2019-08-01 00:00:00

  • Protein secretion in Corynebacterium glutamicum.

    abstract::Corynebacterium glutamicum, a Gram-positive bacterium, has been widely used for the industrial production of amino acids, such as glutamate and lysine, for decades. Due to several characteristics - its ability to secrete properly folded and functional target proteins into culture broth, its low levels of endogenous ex...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1080/07388551.2016.1206059

    authors: Liu X,Zhang W,Zhao Z,Dai X,Yang Y,Bai Z

    更新日期:2017-06-01 00:00:00

  • Methods for investigating biosurfactants and bioemulsifiers: a review.

    abstract::Microorganisms produce biosurfactant (BS)/bioemulsifier (BE) with wide structural and functional diversity which consequently results in the adoption of different techniques to investigate these diverse amphiphilic molecules. This review aims to compile information on different microbial screening methods, surface act...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388550903427280

    authors: Satpute SK,Banpurkar AG,Dhakephalkar PK,Banat IM,Chopade BA

    更新日期:2010-06-01 00:00:00

  • Hydrogel-based methods for engineering cellular microenvironment with spatiotemporal gradients.

    abstract::Natural cellular microenvironment consists of spatiotemporal gradients of multiple physical (e.g. extracellular matrix stiffness, porosity and stress/strain) and chemical cues (e.g. morphogens), which play important roles in regulating cell behaviors including spreading, proliferation, migration, differentiation and a...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2014.993588

    authors: Wang L,Li Y,Huang G,Zhang X,Pingguan-Murphy B,Gao B,Lu TJ,Xu F

    更新日期:2016-01-01 00:00:00

  • Microbial diversity in support of anaerobic biomass valorization.

    abstract::Microbial diversity provides an immense reservoir of functions and supports key steps in maintaining ecosystem balance through matter decomposition processes and nutrient recycling. The use of microorganisms for biomolecule production is now common, but often involves single-strain cultures. In this review, we highlig...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2015.1100584

    authors: Jobard M,Pessiot J,Nouaille R,Fonty G,Sime-Ngando T

    更新日期:2017-02-01 00:00:00

  • Recent advances in small RNA mediated plant-virus interactions.

    abstract::Small RNAs (sRNA) are reported to play pivotal roles in the epigenetic and post-transcriptional regulation of gene expression during growth, development, and stress response in plants. Recently, the involvement of two different classes of sRNAs namely, miRNAs (microRNAs), and siRNAs (small interfering RNAs) in biotic ...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1080/07388551.2019.1597830

    authors: Prasad A,Sharma N,Muthamilarasan M,Rana S,Prasad M

    更新日期:2019-06-01 00:00:00

  • An overview of fungal biopolymers: bioemulsifiers and biosurfactants compounds production.

    abstract::Fungal biopolymers have gained considerable attention from the scientific community for various applications due to their biological and physicochemical properties. The wide applications in several areas, especially in the food industry as a bioemulsifier and in the agricultural area as a biosurfactant, have expanded ...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章

    doi:10.1080/07388551.2020.1805405

    authors: Luft L,Confortin TC,Todero I,Zabot GL,Mazutti MA

    更新日期:2020-12-01 00:00:00

  • Alginate as an immobilization material for MAb production via encapsulated hybridoma cells.

    abstract::Alginate has been widely used in various applications since its first extraction. What makes this biopolymer useful is its high biocompatibility and humid gelation conditions. Both of these features bring it into prominence as an ideal immobilization material. However, there are some complicated aspects of cell immobi...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388550903451652

    authors: Selimoglu SM,Elibol M

    更新日期:2010-06-01 00:00:00

  • Biotherapeutic potential and mechanisms of action of colchicine.

    abstract::Cancer is a clinical situation caused by uncontrolled cell division and is responsible for a large number of deaths worldwide. Colchicine is a classical antimitotic, tubulin-binding agent (TBA) which is being explored for its antitumor activities, although its tubulin-binding ability leads to some toxicity toward norm...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1080/07388551.2017.1303804

    authors: Dubey KK,Kumar P,Labrou NE,Shukla P

    更新日期:2017-12-01 00:00:00

  • Current trends in endotoxin detection and analysis of endotoxin-protein interactions.

    abstract::Endotoxin is a type of pyrogen that can be found in Gram-negative bacteria. Endotoxin can form a stable interaction with other biomolecules thus making its removal difficult especially during the production of biopharmaceutical drugs. The prevention of endotoxins from contaminating biopharmaceutical products is paramo...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2016.1141393

    authors: Dullah EC,Ongkudon CM

    更新日期:2017-03-01 00:00:00

  • Recent trends in ionic liquid (IL) tolerant enzymes and microorganisms for biomass conversion.

    abstract::Second generation biofuel production depends on lignocellulosic (LC) biomass transformation into simple sugars and their subsequent fermentation into alcohols. However, the main obstacle in this process is the efficient breakdown of the recalcitrant cellulose to sugar monomers. Hence, efficient feedstock pretreatment ...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2013.843069

    authors: Portillo Mdel C,Saadeddin A

    更新日期:2015-01-01 00:00:00

  • Solid-state fermentation systems-an overview.

    abstract::Starting with a brief history of solid-state fermentation (SSF), major aspects of SSF are reviewed, which include factors affecting SSF, biomass, fermentors, modeling, industrial microbial enzymes, organic acids, secondary metabolites, and bioremediation. Physico-chemical and environmental factors such as inoculum typ...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1080/07388550590925383

    authors: Krishna C

    更新日期:2005-01-01 00:00:00

  • Nitrilase: a promising biocatalyst in industrial applications for green chemistry.

    abstract::Nitrilases are widely distributed in nature and are able to hydrolyze nitriles into their corresponding carboxylic acids and ammonia. In industry, nitrilases have been used as green biocatalysts for the production of high value-added products. To date, biocatalysts are considered to be important alternatives to chemic...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章

    doi:10.1080/07388551.2020.1827367

    authors: Shen JD,Cai X,Liu ZQ,Zheng YG

    更新日期:2021-02-01 00:00:00

  • A methodological combined framework for roadmapping biosensor research: a fault tree analysis approach within a strategic technology evaluation frame.

    abstract::Biosensor technology began in the 1960s to revolutionize instrumentation and measurement. Despite the glucose sensor market success that revolutionized medical diagnostics, and artificial pancreas promise currently the approval stage, the industry is reluctant to capitalize on other relevant university-produced knowle...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2013.790339

    authors: Siontorou CG,Batzias FA

    更新日期:2014-03-01 00:00:00

  • Green synthesis approach: extraction of chitosan from fungus mycelia.

    abstract::Chitosan, copolymer of glucosamine and N-acetyl glucosamine is mainly derived from chitin, which is present in cell walls of crustaceans and some other microorganisms, such as fungi. Chitosan is emerging as an important biopolymer having a broad range of applications in different fields. On a commercial scale, chitosa...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2012.717217

    authors: Dhillon GS,Kaur S,Brar SK,Verma M

    更新日期:2013-12-01 00:00:00

  • Hydrodynamic cavitation as a strategy to enhance the efficiency of lignocellulosic biomass pretreatment.

    abstract::Hydrodynamic cavitation (HC) is a process technology with potential for application in different areas including environmental, food processing, and biofuels production. Although HC is an undesirable phenomenon for hydraulic equipment, the net energy released during this process is enough to accelerate certain chemica...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章

    doi:10.1080/07388551.2017.1369932

    authors: Terán Hilares R,Ramos L,da Silva SS,Dragone G,Mussatto SI,Santos JCD

    更新日期:2018-06-01 00:00:00

  • Recent advances in mechanical characterisation of biofilm and their significance for material modelling.

    abstract::In recent years, the advances in microbiology show that biofilms are structurally complex, dynamic and adaptable systems including attributes of multicellular organisms and miscellaneous ecosystems. One may distinguish between beneficial and harmful biofilms appearing in daily life as well as various industrial proces...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2012.679250

    authors: Böl M,Ehret AE,Bolea Albero A,Hellriegel J,Krull R

    更新日期:2013-06-01 00:00:00

  • Polyhydroxyalkanoates - what are the uses? Current challenges and perspectives.

    abstract::Over the past few decades, a considerable attention has been focused on the microbial polyhydroxyalkanoates (PHAs) owing to its multifaceted properties, i.e. biodegradability, biocompatibility, non-toxicity and thermo-plasticity. This article presents a critical review of the foregoing research, current trends and fut...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2014.913548

    authors: Masood F,Yasin T,Hameed A

    更新日期:2015-01-01 00:00:00

  • Technological trends and market perspectives for production of microbial oils rich in omega-3.

    abstract::In recent years, foods that contain omega-3 lipids have emerged as important promoters of human health. These lipids are essential for the functional development of the brain and retina, and reduction of the risk of cardiovascular and Alzheimer's diseases. The global market for omega-3 production, particularly docosah...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1080/07388551.2016.1213221

    authors: Finco AMO,Mamani LDG,Carvalho JC,de Melo Pereira GV,Thomaz-Soccol V,Soccol CR

    更新日期:2017-08-01 00:00:00

  • The filamentous fungal pellet and forces driving its formation.

    abstract::Filamentous fungi play an important role not only in the bio-manufacturing of value-added products, but also in bioenergy and environmental research. The bioprocess manipulation of filamentous fungi is more difficult than that of other microbial species because of their different pellet morphologies and the presence o...

    journal_title:Critical reviews in biotechnology

    pub_type: 杂志文章,评审

    doi:10.3109/07388551.2015.1084262

    authors: Zhang J,Zhang J

    更新日期:2016-12-01 00:00:00