Estimating population divergence time and phylogeny from single-nucleotide polymorphisms data with outgroup ascertainment bias.

abstract：:Determining the genetic structure of tropical bird populations is important for assessing potential genetic effects of future habitat fragmentation and for testing hypotheses about evolutionary mechanisms promoting diversification. Here we used 10 microsatellite DNA loci to describe levels of genetic differentiation f...

journal_title：Molecular ecology

authors： Francisco MR,Gibbs HL,Galetti M,Lunardi VO,Galetti PM Jr

更新日期：2007-12-01 00:00:00

abstract：:Understanding the pattern of connectivity among populations is crucial for the development of realistic and spatially explicit population models in marine systems. Here we analysed variation at eight microsatellite loci to assess the genetic structure and to infer patterns of larval dispersal for a brooding coral, Ser...

journal_title：Molecular ecology

authors： Underwood JN,Smith LD,Van Oppen MJ,Gilmour JP

更新日期：2007-02-01 00:00:00

abstract：:Sparse, incomplete and inappropriate historical records of invasive species often hamper invasive species management interventions. Population genetic analyses of invaders might provide a suitable context for the identification of their source populations and possible introduction routes. Here, we describe the populat...

journal_title：Molecular ecology

authors： Rijal DP,Alm T,Jahodová Š,Stenøien HK,Alsos IG

更新日期：2015-11-01 00:00:00

abstract：:The Quaternary cold periods in Europe are thought to have heavily influenced the amount and distribution of intraspecific genetic variation in both animals and plants. The phylogeographies of 10 taxa, including mammals (Ursus arctos, Sorex spp., Crocidura suaveolens, Arvicola spp.), amphibians (Triturus spp.), arthrop...

journal_title：Molecular ecology

authors： Taberlet P,Fumagalli L,Wust-Saucy AG,Cosson JF

更新日期：1998-04-01 00:00:00

abstract：:The genus Epipactis contains a problematical complex of autogamous taxa among which species limits are difficult to define. Different authors have treated these plants in different ways, some recognizing the different taxa as distinct species, others considering them as minor intraspecific variants. These contrasting ...

journal_title：Molecular ecology

authors： Squirrell J,Hollingsworth PM,Bateman RM,Tebbitt MC,Hollingsworth ML

更新日期：2002-10-01 00:00:00

abstract：:Christmas Island is located at the overlap of the Indian and Pacific Ocean marine provinces and is a hot spot for marine hybridization. Here, we evaluate the ecological framework and genetic consequences of hybridization between butterflyfishes Chaetodon guttatissimus and Chaetodon punctatofasciatus. Further, we compa...

journal_title：Molecular ecology

authors： Montanari SR,Hobbs JP,Pratchett MS,Bay LK,Van Herwerden L

更新日期：2014-06-01 00:00:00

abstract：:The number of exotic plant species that have been introduced into the United States far exceeds that of other groups of organisms, and many of these have become invasive. As in many regions of the globe, invasive members of the thistle tribe, Cardueae, are highly problematic in the California Floristic Province, an es...

journal_title：Molecular ecology

authors： Park DS,Potter D

更新日期：2015-06-01 00:00:00

abstract：:Parallel patterns of adaptive divergence and speciation are cited as powerful evidence for the role of selection driving these processes. However, it is often not clear whether parallel phenotypic divergence is underlain by parallel genetic changes. Here, we asked about the genetic basis of parallel divergence in the ...

journal_title：Molecular ecology

authors： Westram AM,Galindo J,Alm Rosenblad M,Grahame JW,Panova M,Butlin RK

更新日期：2014-09-01 00:00:00

abstract：:The deadly poisonous Amanita phalloides is common along the west coast of North America. Death cap mushrooms are especially abundant in habitats around the San Francisco Bay, California, but the species grows as far south as Los Angeles County and north to Vancouver Island, Canada. At different times, various authors ...

journal_title：Molecular ecology

authors： Pringle A,Adams RI,Cross HB,Bruns TD

更新日期：2009-03-01 00:00:00

abstract：:Host specialization is a key process in ecological divergence and speciation of plant-associated fungi. The underlying determinants of host specialization are generally poorly understood, especially in endophytes, which constitute one of the most abundant components of the plant microbiome. We addressed the genetic ba...

journal_title：Molecular ecology

authors： Schirrmann MK,Zoller S,Croll D,Stukenbrock EH,Leuchtmann A,Fior S

更新日期：2018-08-01 00:00:00

abstract：:Most relatives of the self-fertilizing hermaphroditic nematode model organism Caenorhabditis elegans reproduce via obligate outbreeding between males and females, which also represents the ancestral mode of reproduction within the genus. However, little is known about the scope of genetic diversity and differentiation...

journal_title：Molecular ecology

authors： Wang GX,Ren S,Ren Y,Ai H,Cutter AD

更新日期：2010-11-01 00:00:00

abstract：:Diet strongly influences the intestinal microbial communities through species sorting. Alternatively, these communicates may differ because of chance variation in local microbial exposures or species losses among allopatric host populations (i.e. ecological drift). We investigated how these forces shape enteric commun...

journal_title：Molecular ecology

authors： Lankau EW,Hong PY,Mackie RI

更新日期：2012-04-01 00:00:00

abstract：:The effect of Pleistocene climate change on the organisms of tropical and subtropical regions is rather poorly understood. We therefore studied the land snail genus Mandarina (Bradybaenidae) of oceanic Ogasawara (Bonin Islands, Japan), with the aim of using population genetic data to understand their recent history. O...

journal_title：Molecular ecology

authors： Davison A,Chiba S

更新日期：2006-09-01 00:00:00

abstract：:Despite no obvious barriers to gene flow in the marine realm, environmental variation and ecological specializations can lead to genetic differentiation in highly mobile predators. Here, we investigated the genetic structure of the harbour porpoise over the entire species distribution range in western Palearctic water...

journal_title：Molecular ecology

authors： Fontaine MC,Roland K,Calves I,Austerlitz F,Palstra FP,Tolley KA,Ryan S,Ferreira M,Jauniaux T,Llavona A,Öztürk B,Öztürk AA,Ridoux V,Rogan E,Sequeira M,Siebert U,Vikingsson GA,Borrell A,Michaux JR,Aguilar A

更新日期：2014-07-01 00:00:00

abstract：:Past climate change has caused shifts in species distributions and undoubtedly impacted patterns of genetic variation, but the biological processes mediating responses to climate change, and their genetic signatures, are often poorly understood. We test six species-specific biologically informed hypotheses about such ...

journal_title：Molecular ecology

authors： Bemmels JB,Title PO,Ortego J,Knowles LL

更新日期：2016-10-01 00:00:00

abstract：:DNA barcoding facilitates many evolutionary and ecological studies, including the examination of the dietary diversity of herbivores. In this study, we present a survey of ecological associations between herbivorous beetles and host plants from seriously threatened European steppic grasslands. We determined host plant...

journal_title：Molecular ecology

authors： Kajtoch Ł,Kubisz D,Heise W,Mazur MA,Babik W

更新日期：2015-08-01 00:00:00

abstract：:Phylogeographical studies are emerging as a powerful tool for understanding the population structure and evolution of wild relatives of crop species. Because of their value as genetic resources, there is great interest in exploring the distribution of variation in wild relatives of cultivated plants. In this study, we...

journal_title：Molecular ecology

authors： Caicedo AL,Schaal BA

更新日期：2004-07-01 00:00:00

abstract：:It has been hypothesized that salmonids use olfactory cues to return to their natal rivers and streams. However, the key components of the molecular pathway involved in imprinting and homing are still unknown. If odorants are involved in salmon homing migration, then olfactory receptors should play a critical role in ...

journal_title：Molecular ecology

authors： Johnstone KA,Lubieniecki KP,Koop BF,Davidson WS

更新日期：2011-10-01 00:00:00

abstract：:Effective population size (N(e)) is a key parameter to understand evolutionary processes and the viability of endangered populations as it determines the rate of genetic drift and inbreeding. Low Ne can lead to inbreeding depression and reduced population adaptability. In this study, we estimated contemporary N(e) usi...

journal_title：Molecular ecology

authors： Baalsrud HT,Saether BE,Hagen IJ,Myhre AM,Ringsby TH,Pärn H,Jensen H

更新日期：2014-06-01 00:00:00

abstract：:Phenotypic plasticity occurs at a variety of timescales, but little is known about the degree to which plastic responses at different timescales are associated with similar underlying molecular processes, which is critical for assessing the effects of plasticity on evolutionary trajectories. To address this issue, we ...

journal_title：Molecular ecology

authors： Metzger DCH,Schulte PM

更新日期：2018-05-01 00:00:00

abstract：:Colour vision varies within the family Atelidae (Primates, Platyrrhini), which consists of four genera with the following cladistic relationship: {Alouatta[Ateles (Lagothrix and Brachyteles)]}. Spider monkeys (Ateles) and woolly monkeys (Lagothrix) are characteristic of platyrrhine monkeys in possessing a colour visio...

journal_title：Molecular ecology

authors： Talebi MG,Pope TR,Vogel ER,Neitz M,Dominy NJ

更新日期：2006-02-01 00:00:00

abstract：:Genetic rescue is an increasingly considered conservation measure to address genetic erosion associated with habitat loss and fragmentation. The resulting gene flow from facilitating migration may improve fitness and adaptive potential, but is not without risks (e.g., outbreeding depression). Here, we conducted a test...

journal_title：Molecular ecology

authors： Robinson ZL,Coombs JA,Hudy M,Nislow KH,Letcher BH,Whiteley AR

更新日期：2017-09-01 00:00:00

abstract：:Mitochondrial DNA (mtDNA) from 25 blue tits Parus caeruleus sampled from two populations of the Grenoble region (France) was assayed for polymorphism with 17 restriction endonucleases. Nine genotypes were found. Several mtDNA genotypes were also analysed by amplification via the polymerase chain reaction (PCR) and dir...

journal_title：Molecular ecology

authors： Taberlet P,Meyer A,Bouvet J

更新日期：1992-05-01 00:00:00

abstract：:The thermal profiles of 118 bacterial strains, representing six species of the family Enterobacteriaceae, isolated from a variety of native Australian mammals were determined under in vitro conditions. Each of the bacterial species had a unique thermal profile and differed in their minimum or maximum temperature for g...

journal_title：Molecular ecology

authors： Okada S,Gordon DM

更新日期：2001-10-01 00:00:00

abstract：:MtDNA sequencing was used to investigate the genetic population structure of Litoria pearsoniana, a wet forest-restricted hylid frog, endemic to southeast Queensland and northeast New South Wales, Australia. L. pearsoniana is regarded as endangered under Queensland legislation. Significant genetic divergence among pop...

journal_title：Molecular ecology

authors： McGuigan K,McDonald K,Parris K,Moritz C

更新日期：1998-02-01 00:00:00

abstract：:Current forestry policy promotes the use of local seed for new plantings, on the assumption that local material may be better adapted to local conditions. However, landscape-scale genetic studies which are necessary to underpin conservation and breeding strategies are often lacking. We investigated molecular diversity...

journal_title：Molecular ecology

authors： Sutherland BG,Belaj A,Nier S,Cottrell JE,P Vaughan S,Hubert J,Russell K

更新日期：2010-06-01 00:00:00

abstract：:Aspergillus flavus and A. parasiticus are the two most important aflatoxin-producing fungi responsible for the contamination of agricultural commodities worldwide. Both species are heterothallic and undergo sexual reproduction in laboratory crosses. Here we examine the possibility of interspecific matings between A. f...

journal_title：Molecular ecology

authors： Olarte RA,Worthington CJ,Horn BW,Moore GG,Singh R,Monacell JT,Dorner JW,Stone EA,Xie DY,Carbone I

更新日期：2015-04-01 00:00:00

abstract：:Freshwater planarians Dugesia japonica from three localities were examined for cytochrome c oxidase subunit I (COI) gene sequence, karyotype and the presence of genital organ. The planarians from Mt Fujiwara in Japan were composed of two different groups; one revealed inter- and intraindividual COI gene heterogeneity,...

journal_title：Molecular ecology

authors： Bessho Y,Tamura S,Hori H,Tanaka H,Ohama T,Osawa S

更新日期：1997-02-01 00:00:00

abstract：:Ophiocordyceps unilateralis (Hypocreales, Ascomycetes) is an entomopathogenic fungus specific to formicine ants (Formicinae, Hymenoptera). Previous works have shown that the carpenter ant Camponotus leonardi acts as the principal host with occasional infections of ants from the genus Polyrhachis (sister genus of Campo...

journal_title：Molecular ecology

authors： Kobmoo N,Mongkolsamrit S,Tasanathai K,Thanakitpipattana D,Luangsa-Ard JJ

更新日期：2012-06-01 00:00:00

abstract：:Both historical and contemporary processes influence the genetic structure of species, but the relative roles of such processes are still difficult to access. Population genetic studies of species with recent evolutionary histories such as the New Zealand endemic scallop Pecten novaezelandiae (<1 Ma) permit testing of...

journal_title：Molecular ecology

authors： Silva CN,Gardner JP

更新日期：2015-11-01 00:00:00