Genetic structure in a tropical lek-breeding bird, the blue manakin (Chiroxiphia caudata) in the Brazilian Atlantic Forest.

abstract：:A long-standing issue in marine biology is identifying spatial scales at which populations of sessile adults are connected by planktonic offspring. We examined the genetic continuity of the acorn barnacle Balanus glandula, an abundant member of rocky intertidal communities of the northeastern Pacific Ocean, and compar...

journal_title：Molecular ecology

authors： Sotka EE,Wares JP,Barth JA,Grosberg RK,Palumbi SR

更新日期：2004-08-01 00:00:00

abstract：:There is a growing consensus that much of the contemporary phylogeography of northern hemisphere coastal taxa reflects the impact of Pleistocene glaciation, when glaciers covered much of the coastline at higher latitudes and sea levels dropped by as much as 150 m. The genetic signature of postglacial recolonization ha...

journal_title：Molecular ecology

authors： Wilson AB,Eigenmann Veraguth I

更新日期：2010-10-01 00:00:00

abstract：:Greater prairie-chickens (Tympanuchus cupido pinnatus) were once found throughout the tallgrass prairie of midwestern North America but over the last century these prairies have been lost or fragmented by human land use. As a consequence, many current populations of prairie-chickens have become isolated and small. Thi...

journal_title：Molecular ecology

authors： Johnson JA,Toepfer JE,Dunn PO

更新日期：2003-12-01 00:00:00

abstract：:Inbreeding can have negative consequences on population and individual fitness, which could be counteracted by inbreeding avoidance mechanisms. However, the inbreeding risk and inbreeding avoidance mechanisms in endangered species are less studied. The giant panda, a solitary and threatened species, lives in many smal...

journal_title：Molecular ecology

authors： Hu Y,Nie Y,Wei W,Ma T,Van Horn R,Zheng X,Swaisgood RR,Zhou Z,Zhou W,Yan L,Zhang Z,Wei F

更新日期：2017-10-01 00:00:00

abstract：:Marine metapopulations often exhibit subtle population structure that can be difficult to detect. Given recent advances in high-throughput sequencing, an emerging question is whether various genotyping approaches, in concert with improved sampling designs, will substantially improve our understanding of genetic struct...

journal_title：Molecular ecology

authors： D'Aloia CC,Andrés JA,Bogdanowicz SM,McCune AR,Harrison RG,Buston PM

更新日期：2020-06-01 00:00:00

abstract：:The host-associated microbiome is increasingly recognized as a critical player in health and immunity. Recent studies have shown that disruption of commensal microbial communities can contribute to disease pathogenesis and severity. Santa Catalina Island foxes (Urocyon littoralis catalinae) present a compelling system...

journal_title：Molecular ecology

authors： DeCandia AL,Brenner LJ,King JL,vonHoldt BM

更新日期：2020-04-01 00:00:00

abstract：:Kinkajou social groups generally consist of one adult female, two males, one subadult and one juvenile. Based on analysis of variation in 11 microsatellite loci, we assess the degree of kinship within and between four social groups totaling 25 kinkajous. We use exclusion and likelihood analyses to assign parents for s...

journal_title：Molecular ecology

authors： Kays RW,Gittleman JL,Wayne RK

更新日期：2000-06-01 00:00:00

abstract：:Microbiologists often evaluate microbial community dynamics by formulating functional hypotheses based on ecological processes. Indeed, many of the methods and terms currently used to describe animal microbiomes derive from ecology and evolutionary biology. As our understanding of the composition and functional dynami...

journal_title：Molecular ecology

authors： McKenney EA,Koelle K,Dunn RR,Yoder AD

更新日期：2018-04-01 00:00:00

abstract：:We present a de novo assembly of a eukaryote transcriptome using 454 pyrosequencing data. The Glanville fritillary butterfly (Melitaea cinxia; Lepidoptera: Nymphalidae) is a prominent species in population biology but had no previous genomic data. Sequencing runs using two normalized complementary DNA collections from...

journal_title：Molecular ecology

authors： Vera JC,Wheat CW,Fescemyer HW,Frilander MJ,Crawford DL,Hanski I,Marden JH

更新日期：2008-04-01 00:00:00

abstract：:Elucidating the genetic basis of adaptive population divergence is a goal of central importance in evolutionary biology. In principle, it should be possible to identify chromosomal regions involved in adaptive divergence by screening genome-wide patterns of DNA polymorphism to detect the locus-specific signature of po...

journal_title：Molecular ecology

authors： Storz JF

更新日期：2005-03-01 00:00:00

abstract：:To reveal the phylogeographical patterns of four species of coastal tiger beetles in Japan (Lophyridia angulata, Abroscelis anchoralis, Cicindela lewisii and Chaetodera laetescripta), we conducted phylogenetic and nested clade analysis (NCA) using the mitochondrial DNA sequences of two loci (COI and 16S rRNA), with sp...

journal_title：Molecular ecology

authors： Satoh A,Sota T,Ueda T,Enokido Y,Paik JC,Hori M

更新日期：2004-10-01 00:00:00

abstract：:Recent molecular studies have shown that highly mobile species with continuous distributions can exhibit fine-scale population structure. In this context, we assessed genetic structure within a marine species with high dispersal potential, the Atlantic spotted dolphin (Stenella frontalis). Using 19 microsatellite loci...

journal_title：Molecular ecology

authors： Viricel A,Rosel PE

更新日期：2014-10-01 00:00:00

abstract：:Comparative phylogeographic studies of animals with low mobility and/or high habitat specificity remain rare, yet such organisms may hold fine-grained palaeoecological signal. Comparisons of multiple, codistributed species can elucidate major historical events. As part of a multitaxon programme, mitochondrial cytochro...

journal_title：Molecular ecology

authors： Sunnucks P,Blacket MJ,Taylor JM,Sands CJ,Ciavaglia SA,Garrick RC,Tait NN,Rowell DM,Pavlova A

更新日期：2006-12-01 00:00:00

abstract：:We investigated the distribution of genetic variation within and between seven subpopulations in a riparian population of Silene tatarica in northern Finland by using amplified fragment length polymorphism (AFLP) markers. A Bayesian approach-based clustering program indicated that the marker data contained not only on...

journal_title：Molecular ecology

authors： Tero N,Aspi J,Siikamäki P,Jäkäläniemi A,Tuomi J

更新日期：2003-08-01 00:00:00

abstract：:Individual-based assignment tests are now standard tools in molecular ecology and have several applications, including the study of dispersal. The measurement of natal dispersal is vital to understanding the ecology of many species, yet the accuracy of assignment tests in situations where natal dispersal is common rem...

journal_title：Molecular ecology

authors： Berry O,Tocher MD,Sarre SD

更新日期：2004-03-01 00:00:00

abstract：:Speciation remains a central enigma in biology, and nowhere is this more apparent than in shallow tropical seas where biodiversity rivals that of tropical rainforests. Obvious barriers to gene flow are few and most marine species have a highly dispersive larval stage, which should greatly decrease opportunities for sp...

journal_title：Molecular ecology

authors： Bird CE,Holland BS,Bowen BW,Toonen RJ

更新日期：2011-05-01 00:00:00

abstract：:The Neotropical region represents one of the greatest biodiversity hot spots on earth. Despite its unparalleled biodiversity, regional comparative phylogeographic studies are still scarce, with most focusing on model clades (e.g. birds) and typically examining a handful of loci. Here, we apply a genome-wide comparativ...

journal_title：Molecular ecology

authors： Rincon-Sandoval M,Betancur-R R,Maldonado-Ocampo JA

更新日期：2019-03-01 00:00:00

abstract：:The ecological and genetic factors determining the extent of introgression between species in secondary contact zones remain poorly understood. Here, we investigate the relative importance of isolating barriers and the demographic expansion of invasive Mytilus galloprovincialis on the magnitude and the direction of in...

journal_title：Molecular ecology

authors： Saarman NP,Pogson GH

更新日期：2015-09-01 00:00:00

abstract：:The use of sequence polymorphism from individual mitochondrial genes to infer past demography has recently proved controversial because of the recurrence of selective sweeps acting over genes and the need for unlinked multilocus data sets. However, comparative analyses using several species for one gene and/or multipl...

journal_title：Molecular ecology

authors： Plouviez S,Shank TM,Faure B,Daguin-Thiebaut C,Viard F,Lallier FH,Jollivet D

更新日期：2009-09-01 00:00:00

abstract：:In species that form dense populations, major disturbance events are expected to increase the chance of establishment for immigrant lineages. Real-time tests of the impact of disturbance on patterns of genetic structure are, however, scarce. Central to testing these concepts is determining the pool of potential immigr...

journal_title：Molecular ecology

authors： Peters JC,Waters JM,Dutoit L,Fraser CI

更新日期：2020-01-01 00:00:00

abstract：:Genetic diversity in experimental, domesticated and wild populations of the related yeasts, Saccharomyces cerevisiae and Saccharomyces paradoxus, has been well described at the global scale. We investigated the population genomics of a local population on a small spatial scale to address two main questions. First, is ...

journal_title：Molecular ecology

authors： Xia W,Nielly-Thibault L,Charron G,Landry CR,Kasimer D,Anderson JB,Kohn LM

更新日期：2017-02-01 00:00:00

abstract：:The concept of kinship permeates many domains of fundamental and applied biology ranging from social evolution to conservation science to quantitative and human genetics. Until recently, pedigrees were the gold standard to infer kinship, but the advent of next-generation sequencing and the availability of dense geneti...

journal_title：Molecular ecology

authors： Goudet J,Kay T,Weir BS

更新日期：2018-10-01 00:00:00

abstract：:Whether alpine plant species survived Pleistocene glaciations in situ on high alpine nunatak mountains is still under debate. To test this hypothesis, Senecio halleri, a high alpine and endemic species with a narrow distribution range in the European Alps, was chosen as a model organism. Polymerase chain reaction-rest...

journal_title：Molecular ecology

authors： Bettin O,Cornejo C,Edwards PJ,Holderegger R

更新日期：2007-06-01 00:00:00

abstract：:Experimental evolution (EE) combined with whole-genome sequencing (WGS) has become a compelling approach to study the fundamental mechanisms and processes that drive evolution. Most EE-WGS studies published to date have used microbes, owing to their ease of propagation and manipulation in the laboratory and relatively...

journal_title：Molecular ecology

authors： Dettman JR,Rodrigue N,Melnyk AH,Wong A,Bailey SF,Kassen R

更新日期：2012-05-01 00:00:00

abstract：:Phylogeographic patterns in Macrodon ancylodon sampled from 12 locations across all its range were investigated using mitochondrial DNA cytochrome b sequences, and analysed together with patterns of morphometric differentiation. Populations of the North Brazil and the Brazil currents, with warmer waters, form a clade ...

journal_title：Molecular ecology

authors： Santos S,Hrbek T,Farias IP,Schneider H,Sampaio I

更新日期：2006-12-01 00:00:00

abstract：:Both models and case studies suggest that chromosomal inversions can facilitate adaptation and speciation in the presence of gene flow by suppressing recombination between locally adapted alleles. Until recently, however, it has been laborious and time-consuming to identify and genotype inversions in natural populatio...

journal_title：Molecular ecology

authors： Huang K,Andrew RL,Owens GL,Ostevik KL,Rieseberg LH

更新日期：2020-07-01 00:00:00

abstract：:Humans are notorious for disturbing terrestrial ecosystems worldwide, especially those that are in close proximity to urban areas. This disturbance has involved the accumulation of various types of chemical pollutants, of either agricultural or industrial origins, in both soil and water ecosystems. Pollutants have som...

journal_title：Molecular ecology

authors： Corradi N,Charest C

更新日期：2011-08-01 00:00:00

abstract：:Effects of habitat fragmentation on genetic diversity vary among species. This may be attributed to the interacting effects of species traits and landscape structure. While widely distributed and abundant species are often considered less susceptible to fragmentation, this may be different if they are small sized and ...

journal_title：Molecular ecology

authors： Lange R,Durka W,Holzhauer SI,Wolters V,Diekötter T

更新日期：2010-11-01 00:00:00

abstract：:The Monotropoideae (Ericaceae) are nonphotosynthetic plants that obtain fixed carbon from their fungal mycorrhizal associates. To infer the evolutionary history of this symbiosis we identified both the plant and fungal lineages involved using a molecular phylogenetic approach to screen 331 plants, representing 10 of t...

journal_title：Molecular ecology

authors： Bidartondo MI,Bruns TD

更新日期：2001-09-01 00:00:00

abstract：:Population structure and phylogeography of the pink-footed goose, Anser brachyrhynchus Baillon 1833, was studied using mtDNA control region sequences (221 bp) from 142 individuals. Present breeding areas of the species in Greenland, Iceland, and Svalbard were largely covered by ice during the late Pleistocene. In pair...

journal_title：Molecular ecology

authors： Ruokonen M,Aarvak T,Madsen J

更新日期：2005-01-01 00:00:00