Sugar binding induced charge translocation in the melibiose permease from Escherichia coli.

Abstract:

:Electrogenic events associated with the activity of the melibiose permease (MelB), a transporter from Escherichia coli, were investigated. Proteoliposomes containing purified MelB were adsorbed to a solid supported lipid membrane, activated by a substrate concentration jump, and transient currents were measured. When the transporter was preincubated with Na(+) at saturating concentrations, a charge translocation in the protein upon melibiose binding could still be observed. This result demonstrates that binding of the uncharged substrate melibiose triggers a charge displacement in the protein. Further analysis showed that the charge displacement is neither related to extra Na(+) binding to the transporter, nor to the displacement of already bound Na(+) within the transporter. The electrogenic melibiose binding process is explained by a conformational change with concomitant displacement of charged amino acid side chains and/or a reorientation of helix dipoles. A kinetic model is suggested, in which Na(+) and melibiose binding are distinct electrogenic processes associated with approximately the same charge displacement. These binding reactions are fast in the presence of the respective cosubstrate (k > 50 s(-1)).

journal_name

Biochemistry

journal_title

Biochemistry

authors

Meyer-Lipp K,Ganea C,Pourcher T,Leblanc G,Fendler K

doi

10.1021/bi0489053

subject

Has Abstract

pub_date

2004-10-05 00:00:00

pages

12606-13

issue

39

eissn

0006-2960

issn

1520-4995

journal_volume

43

pub_type

杂志文章
  • Location of major antigenic sites of the beta subunit of human chorionic gonadotropin.

    abstract::Purified beta subunit of human chorionic gonadotropin (hCG) was partially reduced with beta-mercaptoethanol, carboxymethylated, and digested with chymotrypsin. The peptides were isolated by high-voltage electrophoresis and paper chromatography. Five major disulfide-containing peptides were isolated, and their location...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00619a034

    authors: Swaminathan N,Braunstein GD

    更新日期:1978-12-26 00:00:00

  • Effect of chloride binding on the thermal trimer-monomer conversion of halorhodopsin in the solubilized system.

    abstract::Halorhodopsin from Natronomonas pharaonis (NpHR) acts an inward-directed, light-driven chloride pump and forms a homotrimer. To evaluate effect of trimeric assembly, that is, intermolecular interaction, on the control or modulation of light-driven chloride pumping activity of individual HRs, it is important to underst...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi901380c

    authors: Sasaki T,Aizawa T,Kamiya M,Kikukawa T,Kawano K,Kamo N,Demura M

    更新日期:2009-12-29 00:00:00

  • Activation of cGMP phosphodiesterase in retinal rods: mechanism of interaction with the GTP-binding protein (transducin).

    abstract::The mechanism of activation of cGMP phosphodiesterase by the GTP-binding protein in the disc membrane of retinal rods has been investigated by measuring the light-induced phosphodiesterase activity in reconstituted systems where the concentration of either the GTP-binding protein or the phosphodiesterase is varied. Th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00444a040

    authors: Bennett N,Clerc A

    更新日期:1989-09-05 00:00:00

  • Reconstitution of 5-hydroxytryptamine transport from cholate-disrupted platelet plasma membrane vesicles.

    abstract::The bile acid cholate disrupts platelet plasma membrane vesicles and inactivates 5-hydroxytryptamine transport activity. The transporter appears not to be solubilized by this procedure, but remains associated with a high molecular weight aggregate. Merely removing cholate does not restore the vesicular structure or tr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00617a033

    authors: Rudnick G,Nelson PJ

    更新日期:1978-11-28 00:00:00

  • Phosphatidylinositol 4,5-bisphosphate alters synaptotagmin 1 membrane docking and drives opposing bilayers closer together.

    abstract::Synaptotagmin 1 (syt1) is a synaptic vesicle-anchored membrane protein that acts as the calcium sensor for the synchronous component of neuronal exocytosis. Using site-directed spin labeling, the position and membrane interactions of a fragment of syt1 containing its two C2 domains (syt1C2AB) were assessed in bilayers...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi200049c

    authors: Kuo W,Herrick DZ,Cafiso DS

    更新日期:2011-04-05 00:00:00

  • Pulsed EPR studies of doublet signal and singlet-like signal in oriented Ca2+-depleted PS II membranes: location of the doublet signal center in PS II.

    abstract::Doublet signal and singlet-like signal induced in Ca(2+)-depleted PS II were investigated by pulsed EPR in one-dimensionally oriented photosystem (PS) II membranes. The doublet signal showed marked angular dependent change in its spectrum in term of the applied magnetic field, indicating that the magnetic dipole-dipol...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9929406

    authors: Mino H,Kawamori A,Ono T

    更新日期:2000-09-12 00:00:00

  • Recombinant hemoglobin(alpha 29leucine --> phenylalanine, alpha 96valine --> tryptophan, beta 108asparagine --> lysine) exhibits low oxygen affinity and high cooperativity combined with resistance to autoxidation.

    abstract::Using our hemoglobin expression system in Escherichia coli, we have constructed three recombinant hemoglobins (rHbs) with amino acid substitutions located in the alpha(1)beta(1) and alpha(1)beta(2) subunit interfaces and in the distal heme pocket of the alpha-chain: rHb(alphaV96W, betaN108K), rHb(alphaL29F, alphaV96W,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi991271t

    authors: Jeong ST,Ho NT,Hendrich MP,Ho C

    更新日期:1999-10-05 00:00:00

  • Catalytic significance of the specificity of divalent cations as KS* and kcat* cofactors for secreted phospholipase A2.

    abstract::Calcium is required for the substrate binding and for the chemical step of the interfacial catalytic turnover cycle of pancreatic phospholipase A2 (PLA2), but not for the binding of the enzyme to the interface. The role of calcium and other divalent cations (C) is analyzed for the effect on the substrate binding and k...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9728607

    authors: Yu BZ,Rogers J,Nicol GR,Theopold KH,Seshadri K,Vishweshwara S,Jain MK

    更新日期:1998-09-08 00:00:00

  • Quantum Mechanics/Molecular Mechanics Simulations Identify the Ring-Opening Mechanism of Creatininase.

    abstract::Creatininase catalyzes the conversion of creatinine (a biosensor for kidney function) to creatine via a two-step mechanism: water addition followed by ring opening. Water addition is common to other known cyclic amidohydrolases, but the precise mechanism for ring opening is still under debate. The proton donor in this...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b01032

    authors: Jitonnom J,Mujika JI,van der Kamp MW,Mulholland AJ

    更新日期:2017-12-05 00:00:00

  • Enzymic hydrolysis of phosphonate esters. Reaction mechanism of intestinal 5'-nucleotide phosphodiesterase.

    abstract::The mechanism of bovine intestinal 5'-nucleotide phosphodiesterase was investigated by determining kinetic constants of systematically varied substrates, with emphasis on esters of phosphonic acids (which have much higer Vmax values than conventional phosphodiester substrates), and by pre-steady-state kinetics using b...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00625a011

    authors: Kelly SJ,Butler LG

    更新日期:1977-03-22 00:00:00

  • Investigation of the mineral phases of bone by solid-state phosphorus-31 magic angle sample spinning nuclear magnetic resonance.

    abstract::Phosphorus-31 magic angle sample spinning NMR spectra have been employed to investigate the structure and composition of the mineral deposits in chicken bone. Three different pulse sequences, Bloch decay, cross-polarization, and dipolar suppression, were employed to obtain spectra from bone specimens of varying age. T...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00320a033

    authors: Roufosse AH,Aue WP,Roberts JE,Glimcher MJ,Griffin RG

    更新日期:1984-12-04 00:00:00

  • Quantitative studies on the melittin-induced leakage mechanism of lipid vesicles.

    abstract::We have investigated, both experimentally and theoretically, the efflux of carboxyfluorescein (a self-quenching fluorescent dye) from vesicles of different sizes and lipid species (POPC, DOPC) after having added the bee venom peptide melittin. This comprises quantitative analyses regarding the extent of lipid-associat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi971009p

    authors: Rex S,Schwarz G

    更新日期:1998-02-24 00:00:00

  • Recombinant DHX33 Protein Possesses Dual DNA/RNA Helicase Activity.

    abstract::RNA helicase DHX33 has been shown to participate in a variety of cellular activities, including ribosome biogenesis, protein translation, and gene transcription. We and others further discovered that DHX33 is strongly expressed in several types of human cancers and plays important roles in promoting cancer cell prolif...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00166

    authors: Wang X,Ge W,Zhang Y

    更新日期:2019-01-29 00:00:00

  • Spectroscopic study of the batho-to-lumi transition during the photobleaching of rhodopsin using ring-modified retinal analogues.

    abstract::Photochemical and subsequent thermal reactions of rhodopsin containing 9-cis-retinal [Rh(9)] or one of four analogues with 9-cis geometries formed from ring-modified retinals, alpha-retinal [alpha Rh(9)], acyclic retinal [AcRh(9)], acyclic alpha-retinal [Ac alpha Rh(9)], and 5-isopropyl-alpha-retinal [P alpha Rh(9)] w...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00233a022

    authors: Okada T,Kandori H,Shichida Y,Yoshizawa T,Denny M,Zhang BW,Asato AE,Liu RS

    更新日期:1991-05-14 00:00:00

  • Evolutionarily distinct versions of the multidomain enzyme α-isopropylmalate synthase share discrete mechanisms of V-type allosteric regulation.

    abstract::Understanding the evolution of allostery in multidomain enzymes remains an important step in improving our ability to identify and exploit structure-function relationships in allosteric mechanisms. A recent protein similarity network for the DRE-TIM metallolyase superfamily indicated there are two evolutionarily disti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi500702u

    authors: Kumar G,Frantom PA

    更新日期:2014-07-29 00:00:00

  • Characterization of the ATPase activity of purified Chinese hamster P-glycoprotein.

    abstract::A simple and rapid procedure is described for purification of P-glycoprotein (Pgp) from a multidrug-resistant Chinese hamster ovary cell line (CR1R12) in which the plasma membranes are highly enriched in Pgp (Al-Shawi, M.K., Senior A.E. (1993) J. Biol. Chem, 268, 4197-4206). The procedure consisted of octylglucoside s...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00189a008

    authors: Urbatsch IL,al-Shawi MK,Senior AE

    更新日期:1994-06-14 00:00:00

  • Serine92 (F7) contributes to the control of heme reactivity and stability in myoglobin.

    abstract::The effects of mutation of the conserved serine92 residue to alanine, valine, and leucine in pig myoglobin have been determined. In myoglobin crystal structures, the hydroxyl group of serine92 is within hydrogen-bonding distance of the N delta-H of histidine93, whose N epsilon coordinates the iron atom of the heme pro...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00070a023

    authors: Smerdon SJ,Krzywda S,Wilkinson AJ,Brantley RE Jr,Carver TE,Hargrove MS,Olson JS

    更新日期:1993-05-18 00:00:00

  • Iso-mechanism of nitroalkane oxidase: 1. Inhibition studies and activation by imidazole.

    abstract::The flavoprotein nitroalkane oxidase catalyzes the oxidation of primary and secondary nitroalkanes to aldehydes and ketones, respectively, transferring electrons to oxygen to form hydrogen peroxide. The steady-state kinetic mechanism of the active flavin adenine dinucleotide-(FAD-) containing form of the enzyme has be...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9922547

    authors: Gadda G,Fitzpatrick PF

    更新日期:2000-02-15 00:00:00

  • Major kinetic traps for the oxidative folding of leech carboxypeptidase inhibitor.

    abstract::The leech carboxypeptidase inhibitor (LCI) is a 66-amino acid protein, containing four disulfides that stabilize its structure. This polypeptide represents an excellent model for the study and understanding of the diversity of folding pathways in small, cysteine-rich proteins. The pathway of oxidative folding of LCI h...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi034308p

    authors: Salamanca S,Li L,Vendrell J,Aviles FX,Chang JY

    更新日期:2003-06-10 00:00:00

  • Polyamide nucleic acid targeted to the primer binding site of the HIV-1 RNA genome blocks in vitro HIV-1 reverse transcription.

    abstract::We report here that polyamide nucleic acid (PNA) as well as a polyamide nucleic acid-DNA chimera complementary to the primer binding site of the HIV-1 genome can completely block priming by tRNA3Lys and consequently the in vitro initiation of reverse transcription by HIV-1 RT. Conventional heating and cooling is not r...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972197m

    authors: Lee R,Kaushik N,Modak MJ,Vinayak R,Pandey VN

    更新日期:1998-01-20 00:00:00

  • DNA translocation by human uracil DNA glycosylase: the case of single-stranded DNA and clustered uracils.

    abstract::Human uracil DNA glycosylase (hUNG) plays a central role in DNA repair and programmed mutagenesis of Ig genes, requiring it to act on sparsely or densely spaced uracil bases located in a variety of contexts, including U/A and U/G base pairs, and potentially uracils within single-stranded DNA (ssDNA). An interesting qu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi301562n

    authors: Schonhoft JD,Stivers JT

    更新日期:2013-04-16 00:00:00

  • Location of the maltosyl isothiocyanate binding site on the human erythrocyte glucose transporter.

    abstract::The covalent affinity probe maltosyl isothiocyanate (MITC) has been used previously to identify the glucose transporter of human erythrocytes as a component of band 3. By use of limited proteolysis, the site on the Mr 100 000 protein to which MITC attaches has been localized to a 17 000-dalton region near the center o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00331a001

    authors: Shelton RL Jr,Langdon RG

    更新日期:1985-05-07 00:00:00

  • Structural Dynamics of the PET-Degrading Cutinase-like Enzyme from Saccharomonospora viridis AHK190 in Substrate-Bound States Elucidates the Ca2+-Driven Catalytic Cycle.

    abstract::A cutinase-type polyesterase from Saccharomonospora viridis AHK190 (Cut190) has been shown to degrade the inner block of polyethylene terephthalate. A unique feature of Cut190 is that its function and stability are regulated by Ca2+ binding. Our previous crystal structure analysis of Cut190S226P showed that one Ca2+ b...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00624

    authors: Numoto N,Kamiya N,Bekker GJ,Yamagami Y,Inaba S,Ishii K,Uchiyama S,Kawai F,Ito N,Oda M

    更新日期:2018-09-11 00:00:00

  • Cell-specific physical and functional coupling of human 5-HT1A receptors to inhibitory G protein alpha-subunits and lack of coupling to Gs alpha.

    abstract::We have studied the physical and functional linkages of heterologously expressed human 5-HT1A receptors to G protein alpha-subunits in HeLa and CHO-K1 cells. HeLa cells expressed immunoreactivity to G(i) proteins with an apparent rank order of G(i) alpha 3 (approximately 1 pmol/mg of protein) > G(i) alpha 1 (approxima...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00092a016

    authors: Raymond JR,Olsen CL,Gettys TW

    更新日期:1993-10-19 00:00:00

  • Chemical-enzymatic insertion of an amino acid residue in the reactive site of soybean trypsin inhibitor (Kunitz).

    abstract::Modified (Arg63-Ile64 reactive-site peptide bond hydrolyzed) soybean trypsin inhibitor (Kunitz) with all reactive amino groups, except that of Ile64, protected was described in the preceding paper (Kowalski, D., and Laskowski, M., Jr. (1976), Biochemistry, preceding paper in this issue). Treatment of this inhibitor wi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00651a022

    authors: Kowalski D,Laskowski M Jr

    更新日期:1976-03-23 00:00:00

  • Gonadotropin releasing hormone activates the lipoxygenase pathway in cultured pituitary cells: role in gonadotropin secretion and evidence for a novel autocrine/paracrine loop.

    abstract::The formation and role of arachidonic acid (AA) and its metabolites during gonadotropin releasing hormone- (GnRH-) induced gonadotropin secretion were investigated in primary cultures of rat pituitary cells. Prelabeled cells ([3H]AA) responded to GnRH challenge with increased formation (about 2-fold) of the leukotrien...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00139a004

    authors: Dan-Cohen H,Sofer Y,Schwartzman ML,Natarajan RD,Nadler JL,Naor Z

    更新日期:1992-06-23 00:00:00

  • Characterization and purification of the discoidin domain-containing protein retinoschisin and its interaction with galactose.

    abstract::RS1, also known as retinoschisin, is an extracellular discoidin domain-containing protein that has been implicated in maintaining the cellular organization and synaptic structure of the vertebrate retina. Mutations in the gene encoding RS1 are responsible for X-linked retinoschisis, a retinal degenerative disease char...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi800938g

    authors: Dyka FM,Wu WW,Pfeifer TA,Molday LL,Grigliatti TA,Molday RS

    更新日期:2008-09-02 00:00:00

  • Transport of newly synthesized sterol to the sterol-enriched plasma membrane occurs via nonvesicular equilibration.

    abstract::The mechanism by which newly synthesized sterols are transported from their site of synthesis, the endoplasmic reticulum (ER), to the sterol-enriched plasma membrane (PM) is not fully understood. Studies in mammalian cells suggest that newly synthesized cholesterol is transported to the PM in Golgi-bypassing vesicles ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi048296z

    authors: Baumann NA,Sullivan DP,Ohvo-Rekilä H,Simonot C,Pottekat A,Klaassen Z,Beh CT,Menon AK

    更新日期:2005-04-19 00:00:00

  • Formation of monomeric S100B and S100A11 proteins at low ionic strength.

    abstract::The S100 proteins comprise a group of EF-hand proteins that undergo a calcium-induced conformational change allowing them to interact with other proteins and produce a biological response. A unique feature of these proteins is the fact that they can form both homo- and heterodimers independent of calcium binding. The ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi802086a

    authors: Marlatt NM,Boys BL,Konermann L,Shaw GS

    更新日期:2009-03-10 00:00:00

  • Cyanine dye N744 inhibits tau fibrillization by blocking filament extension: implications for the treatment of tauopathic neurodegenerative diseases.

    abstract::Tau fibrillization is a potential therapeutic target for Alzheimer's and other neurodegenerative diseases. Small molecules capable of both inhibiting aggregation and promoting filament disaggregation have been discovered, but knowledge of their mechanism of action and potential for testing in biological models is frag...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi050387o

    authors: Necula M,Chirita CN,Kuret J

    更新日期:2005-08-02 00:00:00