Methodological problems in the molecular epidemiology of tuberculosis.

Abstract:

:In systematic studies of the molecular epidemiology of tuberculosis, DNA fingerprinting is used to estimate the fraction of incident cases attributable to recent transmission of Mycobacterium tuberculosis rather than reactivation disease and to identify risk factors for recent transmission. This approach is based on the premise that tuberculosis cases that share a DNA fingerprint are epidemiologically related while cases in which fingerprints are unique are due to remote infection that has reactivated. In this paper, the authors review the objectives and design of molecular epidemiologic studies of tuberculosis, describe current analytical approaches, and consider the impact of these different approaches on study results. Using data from a previously published investigation of the epidemiology of tuberculosis conducted from 1990 to 1993 among tuberculosis patients in New York City, New York, the authors show how selecting different measures of disease frequency, comparison groups, and sampling strategies may impact the results and interpretability of the study. They demonstrate ways to conduct sensitivity analyses of estimated results and suggest strategies that may improve the usefulness of this approach to studying tuberculosis.

journal_name

Am J Epidemiol

authors

Murray M,Alland D

doi

10.1093/aje/155.6.565

subject

Has Abstract

pub_date

2002-03-15 00:00:00

pages

565-71

issue

6

eissn

0002-9262

issn

1476-6256

journal_volume

155

pub_type

杂志文章
  • Using Reports of Latent Tuberculosis Infection Among Young Children to Identify Tuberculosis Transmission in New York City, 2006-2012.

    abstract::The presence of latent tuberculosis infection (LTBI) in young children indicates recent tuberculosis (TB) transmission. We reviewed surveillance reports of children with LTBI to assess whether more follow-up is needed to prevent TB in this high-risk population. Data on all children under 5 years of age who were report...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwx354

    authors: Slutsker JS,Trieu L,Crossa A,Ahuja SD

    更新日期:2018-06-01 00:00:00

  • The roles of insulin, obesity, and fat distribution in the elevation of cardiovascular risk factors in impaired glucose tolerance. The San Luis Valley Diabetes Study.

    abstract::The objective of this study was to determine whether a less favorable risk factor pattern for cardiovascular disease among persons with impaired glucose tolerance could be explained by fasting insulin, obesity, and/or a central distribution of body fat. Between 1984 and 1988, cardiovascular risk factors were examined ...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a116575

    authors: Burchfiel CM,Shetterly SM,Baxter J,Hamman RF

    更新日期:1992-11-01 00:00:00

  • Estimation of the standardized risk difference and ratio in a competing risks framework: application to injection drug use and progression to AIDS after initiation of antiretroviral therapy.

    abstract::There are few published examples of absolute risk estimated from epidemiologic data subject to censoring and competing risks with adjustment for multiple confounders. We present an example estimating the effect of injection drug use on 6-year risk of acquired immunodeficiency syndrome (AIDS) after initiation of combin...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章,多中心研究

    doi:10.1093/aje/kwu122

    authors: Cole SR,Lau B,Eron JJ,Brookhart MA,Kitahata MM,Martin JN,Mathews WC,Mugavero MJ,CNICS Research Network.

    更新日期:2015-02-15 00:00:00

  • Physical activity and depressive symptoms: the NHANES I Epidemiologic Follow-up Study.

    abstract::The relation between self-reported physical activity and depressive symptoms was analyzed for 1,900 healthy subjects aged 25-77 years in the Epidemiologic Follow-up Study (1982-1984) to the first National Health and Nutrition Examination Survey (NHANES I). Depressive symptomatology as measured by the Center for Epidem...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a115087

    authors: Farmer ME,Locke BZ,Mościcki EK,Dannenberg AL,Larson DB,Radloff LS

    更新日期:1988-12-01 00:00:00

  • Association of delayed conception with caffeine consumption.

    abstract::This cross-sectional study investigated the relation between intake of caffeine-containing beverages and time to conception in a population of 1,909 married women in New Haven, Connecticut, between May 12, 1980 and March 12, 1982. Women were interviewed shortly after the first prenatal visit regarding the length of ti...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a116826

    authors: Hatch EE,Bracken MB

    更新日期:1993-12-15 00:00:00

  • Immunogenicity and safety of a plasma-derived heat-inactivated hepatitis B vaccine (CLB). Studies in volunteers at a low risk of infection with hepatitis B virus.

    abstract::The safety and immunogenicity of a plasma-derived heat-inactivated hepatitis B vaccine (CLB) were evaluated in 471 healthy human volunteers, who, both in their occupations and in their private lives, had been at minimal risk of being infected with hepatitis B virus. The first 202 individuals received three 3-microgram...

    journal_title:American journal of epidemiology

    pub_type: 临床试验,杂志文章,随机对照试验

    doi:10.1093/oxfordjournals.aje.a113936

    authors: Lelie PN,Reesink HW,de Jong-van Manen ST,Dees PJ,Reerink-Brongers EE

    更新日期:1984-11-01 00:00:00

  • Determinants of the incidence of childhood asthma: a two-stage case-control study.

    abstract::Extensive literature exists on potential risk factors for childhood asthma. To the authors' knowledge, no investigators have yet attempted to disentangle the effects of those determinants within a single study setting. The authors aimed to evaluate the independent effects of 47 potential determinants (from the prenata...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwn309

    authors: Martel MJ,Rey E,Malo JL,Perreault S,Beauchesne MF,Forget A,Blais L

    更新日期:2009-01-15 00:00:00

  • Estrogen therapy and bone mineral density in African-American and Caucasian women.

    abstract::Controlling for body size and composition, the authors examined the association between estrogen therapy and bone mineral density in older African-American and Caucasian women. In 1992-1998, 443 African-American and 989 Caucasian women aged 45-87 years were assessed for medication use, laboratory variables, behavioral...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwp460

    authors: Eskridge SL,Morton DJ,Kritz-Silverstein D,Barrett-Connor E,Wingard D,Wooten W

    更新日期:2010-04-01 00:00:00

  • Agreement rates between oral contraceptive users and prescribers in relation to drug use histories.

    abstract::A comparison between prescriber records and patient-reported oral contraceptive histories obtained during a case-control study of thromboembolism and oral contraceptive use served as the basis for evaluating the extent of agreement between these two sources of information. Agreement between oral contraceptive user and...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a112529

    authors: Stolley PD,Tonascia JA,Sartwell PE,Tockman MS,Tonascia S,Rutledge A,Schinnar R

    更新日期:1978-03-01 00:00:00

  • Marginal structural Cox models for estimating the association between β-interferon exposure and disease progression in a multiple sclerosis cohort.

    abstract::Longitudinal observational data are required to assess the association between exposure to β-interferon medications and disease progression among relapsing-remitting multiple sclerosis (MS) patients in the "real-world" clinical practice setting. Marginal structural Cox models (MSCMs) can provide distinct advantages ov...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwu125

    authors: Karim ME,Gustafson P,Petkau J,Zhao Y,Shirani A,Kingwell E,Evans C,van der Kop M,Oger J,Tremlett H

    更新日期:2014-07-15 00:00:00

  • Short-term temporal cycles in the frequency of suicide. United States, 1972-1978.

    abstract::Vital statistics data for the United States for the years 1972-1978 have been analyzed for variation in frequency of suicide by month, day of the week, day of the month, and phase of the lunar cycle. Frequency of suicide showed a peak in the spring months, a lesser peak in the fall and was lowest in December. Suicide ...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a113608

    authors: MacMahon K

    更新日期:1983-06-01 00:00:00

  • Characteristics of leisure time physical activity associated with decreased risk of premature all-cause and cardiovascular disease mortality in middle-aged men.

    abstract::The association between leisure time physical activity and the risk of all-cause and cardiovascular disease mortality was analyzed in a Finnish cohort of 1,072 men age 35-63 years who were followed up for 10 years and 10 months. During the period, 168 deaths were recorded, 93 of which were the result of cardiovascular...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a008830

    authors: Haapanen N,Miilunpalo S,Vuori I,Oja P,Pasanen M

    更新日期:1996-05-01 00:00:00

  • Systematic review and meta-analysis of the association between complement component 3 and age-related macular degeneration: a HuGE review and meta-analysis.

    abstract::The authors performed a meta-analysis to estimate the magnitude of polymorphism effects for the complement component C3 gene (C3) and their possible mode of action on age-related macular degeneration (AMD). The meta-analysis included 16 and 7 studies for rs2230199 and rs1047286, respectively. Data extraction and risk ...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章,meta分析,评审

    doi:10.1093/aje/kwr025

    authors: Thakkinstian A,McKay GJ,McEvoy M,Chakravarthy U,Chakrabarti S,Silvestri G,Kaur I,Li X,Attia J

    更新日期:2011-06-15 00:00:00

  • A descriptive study of neuritic plaques and neurofibrillary tangles in an autopsy population.

    abstract::From July 1, 1980 to December 2, 1982, all individuals at autopsy at the University of Michigan Medical Center greater than or equal to 65 years of age and selected individuals less than 65 years of age were examined for neuritic plaques and neurofibrillary tangles. Sections of the hippocampal, parahippocampal tempora...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a113897

    authors: Miller FD,Hicks SP,D'Amato CJ,Landis JR

    更新日期:1984-09-01 00:00:00

  • Seroresponse to hepatitis B vaccine in patients and staff of renal dialysis centers, Wisconsin.

    abstract::Since June 1982, the Wisconsin Chronic Renal Disease Program has provided reimbursement for hepatitis B virus vaccine and pre- and postvaccine serologic testing for patients and staff in all Wisconsin renal dialysis centers. Between July 1, 1982 and June 30, 1984, 444 dialysis patients in 22 renal dialysis centers and...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a114858

    authors: Steketee RW,Ziarnik ME,Davis JP

    更新日期:1988-04-01 00:00:00

  • Integrating genetic association, genetics of gene expression, and single nucleotide polymorphism set analysis to identify susceptibility Loci for type 2 diabetes mellitus.

    abstract::Large-scale genome-wide association studies (GWAS) have identified over 40 genomic regions significantly associated with type 2 diabetes mellitus. However, GWAS results are not always straightforward to interpret, and linking these loci to meaningful disease etiology is often difficult without extensive follow-up stud...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kws123

    authors: Greenawalt DM,Sieberts SK,Cornelis MC,Girman CJ,Zhong H,Yang X,Guinney J,Qi L,Hu FB

    更新日期:2012-09-01 00:00:00

  • Socioeconomic status and asthma prevalence in young adults: the European Community Respiratory Health Survey.

    abstract::The authors assessed the association between asthma prevalence and socioeconomic status at both the individual and center levels simultaneously.by using data from 32 centers in 15 countries. Included were 10,971 subjects aged 20-44 years selected from the general population and interviewed in 1991-1992. Socioeconomic ...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章,多中心研究

    doi:10.1093/aje/kwh186

    authors: Basagaña X,Sunyer J,Kogevinas M,Zock JP,Duran-Tauleria E,Jarvis D,Burney P,Anto JM,European Community Respiratory Health Survey.

    更新日期:2004-07-15 00:00:00

  • Causal Mediation Analysis With Observational Data: Considerations and Illustration Examining Mechanisms Linking Neighborhood Poverty to Adolescent Substance Use.

    abstract::Understanding the mediation mechanisms by which an exposure or intervention affects an outcome can provide a look into what has been called a "black box" of many epidemiologic associations, thereby providing further evidence of a relationship and possible points of intervention. Rapid methodologic developments in medi...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwy248

    authors: Rudolph KE,Goin DE,Paksarian D,Crowder R,Merikangas KR,Stuart EA

    更新日期:2019-03-01 00:00:00

  • Physical activity and mortality: is the association explained by genetic selection?

    abstract::Public health recommendations promote physical activity to improve health and longevity. Recent data suggest that the association between physical activity and mortality may be due to genetic selection. Using data on twins, the authors investigated whether genetic selection explains the association between physical ac...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwm132

    authors: Carlsson S,Andersson T,Lichtenstein P,Michaëlsson K,Ahlbom A

    更新日期:2007-08-01 00:00:00

  • Low-dose exposure to asbestos and lung cancer: dose-response relations and interaction with smoking in a population-based case-referent study in Stockholm, Sweden.

    abstract::This population-based case-referent study investigated the lung cancer risk associated with occupational exposure to asbestos, focusing on dose-response relations and the interaction with tobacco smoking. Incident cases of lung cancer among males aged 40-75 years in Stockholm County, Sweden, were identified from 1985 ...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/155.11.1016

    authors: Gustavsson P,Nyberg F,Pershagen G,Schéele P,Jakobsson R,Plato N

    更新日期:2002-06-01 00:00:00

  • Serum phosphorus levels and the spectrum of ankle-brachial index in older men: the Osteoporotic Fractures in Men (MrOS) study.

    abstract::A higher serum phosphorus level is associated with cardiovascular disease (CVD) events among community-living populations. Mechanisms are unknown. The ankle-brachial index (ABI) provides information on both atherosclerosis and arterial stiffness. In this cross-sectional study (2000-2002), the authors evaluated the ass...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwq020

    authors: Meng J,Wassel CL,Kestenbaum BR,Collins TC,Criqui MH,Lewis CE,Cummings SR,Ix JH,Osteoporotic Fractures in Men (MrOS) Study Group.

    更新日期:2010-04-15 00:00:00

  • Alcohol consumption with age: a cross-sectional and longitudinal study of the Atherosclerosis Risk in Communities (ARIC) study, 1987-1995.

    abstract::Previous cross-sectional and longitudinal studies assessing the association between age and drinking are inconsistent. Evaluating 15,425 Black and White men and women from four communities, this study sought to determine whether there was a consistent relation between age and drinking in cross-sectional and longitudin...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/153.11.1102

    authors: Eigenbrodt ML,Mosley TH Jr,Hutchinson RG,Watson RL,Chambless LE,Szklo M

    更新日期:2001-06-01 00:00:00

  • Associations of prepregnancy cardiovascular risk factors with the offspring's birth weight.

    abstract::Low birth weight of offspring has been associated with increased risk of maternal cardiovascular mortality, and cardiovascular risk factors measured within pregnancy have been related to offspring birth weight. It is not clear whether cardiovascular risk factors assessed prior to pregnancy are associated with the offs...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwm272

    authors: Romundstad PR,Davey Smith G,Nilsen TI,Vatten LJ

    更新日期:2007-12-15 00:00:00

  • Is More Area-Level Crime Associated With More Sitting and Less Physical Activity? Longitudinal Evidence From 37,162 Australians.

    abstract::Does a rise in crime result in increased sitting time and a reduction in physical activity? We used unobserved ("fixed")-effects models to examine associations between change in objectively measured crime (nondomestic violence, malicious damage, breaking and entering, and stealing, theft, and robbery) in Australia and...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kww106

    authors: Astell-Burt T,Feng X,Kolt GS,Jalaludin B

    更新日期:2016-12-15 00:00:00

  • Added epidemiologic value to tuberculosis prevention and control of the investigation of clustered genotypes of Mycobacterium tuberculosis isolates.

    abstract::The Centers for Disease Control and Prevention established the US National Tuberculosis Genotyping and Surveillance Network to study the utility of genotyping Mycobacterium tuberculosis isolates for prevention and control. From 1998 to 2000, four sites performed conventional contact investigations and epidemiologic in...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwh253

    authors: McNabb SJ,Kammerer JS,Hickey AC,Braden CR,Shang N,Rosenblum LS,Navin TR

    更新日期:2004-09-15 00:00:00

  • Partial Mediation by Cadmium Exposure of the Association Between Tobacco Smoking and Atherosclerotic Plaques in the Carotid Artery.

    abstract::Exposure to cadmium confers increased cardiovascular risk. Tobacco smoke contains cadmium, which, hypothetically, may mediate parts of the tobacco-associated risk of developing atherosclerotic plaques. Baseline data from the Swedish Malmö Diet and Cancer cohort (1991-1996) were used to test this hypothesis. Mediation ...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwx306

    authors: Andersson EM,Fagerberg B,Sallsten G,Borné Y,Hedblad B,Engström G,Barregard L

    更新日期:2018-04-01 00:00:00

  • Educational status and blood pressure: the Second National Health and Nutrition Examination Survey, 1976-1980, and the Hispanic Health and Nutrition Examination Survey, 1982-1984.

    abstract::An inverse association between socioeconomic status, as measured by years of education, and blood pressure has been reported in a number of studies. However, two secular trends may have changed the nature of this relation: a higher mean level of education in the population and intervention for high blood pressure in t...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a116245

    authors: Sorel JE,Ragland DR,Syme SL,Davis WB

    更新日期:1992-06-15 00:00:00

  • Risk of childhood leukemia associated with vaccination, infection, and medication use in childhood: the Cross-Canada Childhood Leukemia Study.

    abstract::Current hypotheses consonant with the peak in leukemia incidence in early childhood point to an infectious etiology. The authors examined the effect of postnatal exposures predicted to affect early immune functioning, including childhood vaccinations, illness, medication use, and breastfeeding patterns. Children 0-15 ...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/aje/kwm339

    authors: MacArthur AC,McBride ML,Spinelli JJ,Tamaro S,Gallagher RP,Theriault GP

    更新日期:2008-03-01 00:00:00

  • Connective tissue disease in southeastern Georgia: a case-control study of etiologic factors.

    abstract::The authors conducted a population-based case-control study of connective tissue disease in a four-county area in southeastern Georgia. Interviews with 44 cases and 88 controls were conducted in September and October of 1986. The association with a family history of these disorders was reconfirmed, and a positive asso...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a115348

    authors: Freni-Titulaer LW,Kelley DB,Grow AG,McKinley TW,Arnett FC,Hochberg MC

    更新日期:1989-08-01 00:00:00

  • Risk factors for popliteal and carotid wall thicknesses in the Atherosclerosis Risk in Communities (ARIC) Study.

    abstract::The authors evaluated risk factors potentially associated with the development of popliteal artery atherosclerosis in a population-based study and compared them with factors linked to carotid wall intimal-medial thickness. The Atherosclerosis Risk in Communities (ARIC) Study is a longitudinal investigation of cardiova...

    journal_title:American journal of epidemiology

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aje.a009929

    authors: Dobs AS,Nieto FJ,Szklo M,Barnes R,Sharrett AR,Ko WJ

    更新日期:1999-11-15 00:00:00