The maize regulatory gene B-Peru contains a DNA rearrangement that specifies tissue-specific expression through both positive and negative promoter elements.

Abstract:

:The B-Peru allele of the maize b regulatory gene is unusual relative to most b alleles in that it is expressed in the aleurone layer of the seed. It is also expressed in a subset of plant vegetative tissues. Transgenic maize plants containing the B-Peru gene with the first 710 bases of upstream sequence conferred the same levels of aleurone expression as nontransgenic B-Peru plants, but no pigment was made in vegetative tissues. Transient transformation assays in aleurone tissue localized the aleurone-specific promoter to the first 176 bases of the B-Peru upstream region and identified two critically important regions within this fragment. Mutation of either region alone reduced expression greater than fivefold. Surprisingly, the double mutation actually increased expression to twice the native promoter level. Our results suggest that these two critical sequences, which lie close together in the promoter, may form a negative regulatory element. Several lines of evidence suggest that the B-Peru promoter arose through the translocation of an existing aleurone-specific promoter to the b locus. Immediately upstream of the aleurone-specific promoter elements and in the opposite orientation to the b coding sequence is a pseudogene sequence with strong similarity to a known class of proteins. Our findings that novel aleurone-specific promoter sequences of the B-Peru transcription factor are found adjacent to part of another gene in a small insertion are quite unexpected and have interesting evolutionary implications.

journal_name

Genetics

journal_title

Genetics

authors

Selinger DA,Lisch D,Chandler VL

subject

Has Abstract

pub_date

1998-06-01 00:00:00

pages

1125-38

issue

2

eissn

0016-6731

issn

1943-2631

journal_volume

149

pub_type

杂志文章

相关文献

GENETICS文献大全
  • Fission yeast Ras1 effector Scd1 interacts with the spindle and affects its proper formation.

    abstract::Ras1 GTPase is the Schizosaccharomyces pombe homolog of the mammalian Ha-Ras proto-oncoprotein. Ras1 interacts with Scd1 (aka Ral1), a presumptive guanine nucleotide exchange factor for Cdc42sp, to control organization of the cytoskeleton. In this study, we demonstrated that the scd1 deletion (scd1Delta) induced hyper...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Li YC,Chen CR,Chang EC

    更新日期:2000-11-01 00:00:00

  • Cryptic operon for beta-glucoside metabolism in Escherichia coli K12: genetic evidence for a regulatory protein.

    abstract::Escherichia coli K12 does not metabolize beta-glucosides such as arbutin and salicin because of lack of expression of the bglBSRC operon, which contains structural genes for transport (bglC) and hydrolysis (bglB) of phospho-beta-glucosides. Mutants carrying lesions in the cis-acting regulatory site bglR metabolize bet...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Defez R,De Felice M

    更新日期:1981-01-01 00:00:00

  • Drosophila calmodulin mutants with specific defects in the musculature or in the nervous system.

    abstract::We have studied lethal mutations in the single calmodulin gene (Cam) of Drosophila to gain insight into the in vivo functions of this important calcium sensor. As a result of maternal calmodulin (CaM) in the mature egg, lethality is delayed until the postembryonic stages. Prior to death in the first larval instar, Cam...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Wang B,Sullivan KM,Beckingham K

    更新日期:2003-11-01 00:00:00

  • Molecular characterization of tol, a mediator of mating-type-associated vegetative incompatibility in Neurospora crassa.

    abstract::The mating-type locus in the haploid filamentous fungus, Neurospora crassa, controls mating and sexual development. The fusion of reproductive structures of opposite mating type, A and a, is required to initiate sexual reproduction. However, the fusion of hyphae of opposite mating type during vegetative growth results...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Shiu PK,Glass NL

    更新日期:1999-02-01 00:00:00

  • An Allosteric Network for Spliceosome Activation Revealed by High-Throughput Suppressor Analysis in Saccharomyces cerevisiae.

    abstract::Selection of suppressor mutations that correct growth defects caused by substitutions in an RNA or protein can reveal functionally important molecular structures and interactions in living cells. This approach is particularly useful for the study of complex biological pathways involving many macromolecules, such as pr...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.119.301922

    authors: Brow DA

    更新日期:2019-05-01 00:00:00

  • Expression patterns and mutant phenotype of teosinte branched1 correlate with growth suppression in maize and teosinte.

    abstract::The evolution of domesticated maize from its wild ancestor teosinte is a dramatic example of the effect of human selection on agricultural crops. Maize has one dominant axis of growth, whereas teosinte is highly branched. The axillary branches in maize are short and feminized whereas the axillary branches of teosinte ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Hubbard L,McSteen P,Doebley J,Hake S

    更新日期:2002-12-01 00:00:00

  • Loss-of-function mutations in a glutathione S-transferase suppress the prune-Killer of prune lethal interaction.

    abstract::The prune gene of Drosophila melanogaster is predicted to encode a phosphodiesterase. Null alleles of prune are viable but cause an eye-color phenotype. The abnormal wing discs gene encodes a nucleoside diphosphate kinase. Killer of prune is a missense mutation in the abnormal wing discs gene. Although it has no pheno...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.105.044669

    authors: Provost E,Hersperger G,Timmons L,Ho WQ,Hersperger E,Alcazar R,Shearn A

    更新日期:2006-01-01 00:00:00

  • Unusual regulation of splicing of the cholinergic locus in Caenorhabditis elegans.

    abstract::The essential neurotransmitter acetylcholine functions throughout the animal kingdom. In Caenorhabditis elegans, the acetylcholine biosynthetic enzyme [choline acetyltransferase (ChAT)] and vesicular transporter [vesicular acetylcholine transporter (VAChT)] are encoded by the cha-1 and unc-17 genes, respectively. Thes...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.173765

    authors: Mathews EA,Mullen GP,Manjarrez JR,Rand JB

    更新日期:2015-03-01 00:00:00

  • The effects of assortative mating and migration on cytonuclear associations in hybrid zones.

    abstract::We examine the influence of nonrandom mating and immigration on the evolutionary dynamics of cytonuclear associations in hybrid zones. Recursion equations for allelic and genotypic cytonuclear disequilibria were generated under models of (1) migration alone, assuming hybrid zone matings are random with respect to cyto...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Asmussen MA,Arnold J,Avise JC

    更新日期:1989-08-01 00:00:00

  • A Bayesian Approach to Inferring Rates of Selfing and Locus-Specific Mutation.

    abstract::We present a Bayesian method for characterizing the mating system of populations reproducing through a mixture of self-fertilization and random outcrossing. Our method uses patterns of genetic variation across the genome as a basis for inference about reproduction under pure hermaphroditism, gynodioecy, and a model de...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.179093

    authors: Redelings BD,Kumagai S,Tatarenkov A,Wang L,Sakai AK,Weller SG,Culley TM,Avise JC,Uyenoyama MK

    更新日期:2015-11-01 00:00:00

  • Empirical evaluation reveals best fit of a logistic mutation model for human Y-chromosomal microsatellites.

    abstract::The rate of microsatellite mutation is dependent upon both the allele length and the repeat motif, but the exact nature of this relationship is still unknown. We analyzed data on the inheritance of human Y-chromosomal microsatellites in father-son duos, taken from 24 published reports and comprising 15,285 directly ob...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.111.132308

    authors: Jochens A,Caliebe A,Rösler U,Krawczak M

    更新日期:2011-12-01 00:00:00

  • VNTR allele frequency distributions under the stepwise mutation model: a computer simulation approach.

    abstract::Variable numbers of tandem repeats (VNTRs) are a class of highly informative and widely dispersed genetic markers. Despite their wide application in biological science, little is known about their mutational mechanisms or population dynamics. The objective of this work was to investigate four summary measures of VNTR ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Shriver MD,Jin L,Chakraborty R,Boerwinkle E

    更新日期:1993-07-01 00:00:00

  • Sen1p performs two genetically separable functions in transcription and processing of U5 small nuclear RNA in Saccharomyces cerevisiae.

    abstract::The Saccharomyces cerevisiae SEN1 gene codes for a nuclear-localized superfamily I helicase. SEN1 is an ortholog of human SETX (senataxin), which has been implicated in the neurological disorders ataxia-ocular apraxia type 2 and juvenile amyotrophic lateral sclerosis. Pleiotropic phenotypes conferred by sen1 mutations...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.109.110031

    authors: Finkel JS,Chinchilla K,Ursic D,Culbertson MR

    更新日期:2010-01-01 00:00:00

  • Conserved WCPL and CX4C domains mediate several mating adhesin interactions in Saccharomyces cerevisiae.

    abstract::Several adhesins are induced by pheromones during mating in Saccharomyces cerevisiae, including Aga1p, Aga2p, Sag1p (Agalpha1p), and Fig2p. These four proteins all participate in or influence a well-studied agglutinin interaction mediated by Aga1p-Aga2p complexes and Sag1p; however, they also play redundant and essent...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.108.100073

    authors: Huang G,Dougherty SD,Erdman SE

    更新日期:2009-05-01 00:00:00

  • Genetic requirements for the function of the archaeal virus SSV1 in Sulfolobus solfataricus: construction and testing of viral shuttle vectors.

    abstract::Directed open reading frame (ORF) disruption and a serial selection technique in Escherichia coli and the extremely thermophilic archaeon Sulfolobus solfataricus allowed the identification of otherwise cryptic crucial and noncrucial viral open reading frames in the genome of the archaeal virus SSV1. It showed that the...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Stedman KM,Schleper C,Rumpf E,Zillig W

    更新日期:1999-08-01 00:00:00

  • Mitochondrial translation: elongation factor tu is essential in fission yeast and depends on an exchange factor conserved in humans but not in budding yeast.

    abstract::The translation elongation factor EF-Tu is a GTPase that delivers amino-acylated tRNAs to the ribosome during the elongation step of translation. EF-Tu/GDP is recycled by the guanine nucleotide exchange factor EF-Ts. Whereas EF-Ts is lacking in S. cerevisiae, both translation factors are found in S. pombe and H. sapie...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.037473

    authors: Chiron S,Suleau A,Bonnefoy N

    更新日期:2005-04-01 00:00:00

  • Logjam encodes a predicted EMP24/GP25 protein that is required for Drosophila oviposition behavior.

    abstract::A newly characterized Drosophila melanogaster gene, logjam (loj), functions in female reproduction by modulating oviposition behavior. The locus encodes at least six overlapping transcripts with unique 5' ends. P-element mutants that express very low levels of loj transcripts are unable to oviposit mature eggs. This p...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Carney GE,Taylor BJ

    更新日期:2003-05-01 00:00:00

  • Loss of Drosophila melanogaster p21-activated kinase 3 suppresses defects in synapse structure and function caused by spastin mutations.

    abstract::Microtubules are dynamic structures that must elongate, disassemble, and be cleaved into smaller pieces for proper neuronal development and function. The AAA ATPase Spastin severs microtubules along their lengths and is thought to regulate the balance between long, stable filaments and shorter fragments that seed exte...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.111.130831

    authors: Ozdowski EF,Gayle S,Bao H,Zhang B,Sherwood NT

    更新日期:2011-09-01 00:00:00

  • An ancient retrovirus-like element contains hot spots for SINE insertion.

    abstract::Vertebrate retrotransposons have been used extensively for phylogenetic analyses and studies of molecular evolution. Information can be obtained from specific inserts either by comparing sequence differences that have accumulated over time in orthologous copies of that insert or by determining the presence or absence ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Cantrell MA,Filanoski BJ,Ingermann AR,Olsson K,DiLuglio N,Lister Z,Wichman HA

    更新日期:2001-06-01 00:00:00

  • Interaction Between Familial Transmission and a Constitutively Active Immune System Shapes Gut Microbiota in Drosophila melanogaster.

    abstract::Resident gut bacteria are constantly influencing the immune system, yet the role of the immune system in shaping microbiota composition during an organism's life span has remained unclear. Experiments in mice have been inconclusive due to differences in husbandry schemes that led to conflicting results. We used Drosop...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.116.190215

    authors: Mistry R,Kounatidis I,Ligoxygakis P

    更新日期:2017-06-01 00:00:00

  • Cloning and sequencing the first HLA gene.

    abstract::This Perspectives article recounts the isolation and sequencing of the first human histocompatibility gene (HLA) in 1980-1981. At the time, general knowledge of the molecules of the immune system was already fairly extensive, and gene rearrangements in the immunoglobulin complex (discovered in 1976) had generated much...

    journal_title:Genetics

    pub_type: 杂志文章,评审

    doi:10.1534/genetics.110.113852

    authors: Jordan BR

    更新日期:2010-04-01 00:00:00

  • Maximum likelihood estimation of recombination rates from population data.

    abstract::We describe a method for co-estimating r = C/mu (where C is the per-site recombination rate and mu is the per-site neutral mutation rate) and Theta = 4N(e)mu (where N(e) is the effective population size) from a population sample of molecular data. The technique is Metropolis-Hastings sampling: we explore a large numbe...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Kuhner MK,Yamato J,Felsenstein J

    更新日期:2000-11-01 00:00:00

  • The conversion gradient at HIS4 of Saccharomyces cerevisiae. II. A role for mismatch repair directed by biased resolution of the recombinational intermediate.

    abstract::Salient features of recombination at ARG4 of Saccharomyces provoke a variation of the double-strand-break repair (DSBR) model that has the following features: (1) Holliday junction cutting is biased in favor of strands upon which DNA synthesis occurred during formation of the joint molecule (this bias ensures that cut...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Foss HM,Hillers KJ,Stahl FW

    更新日期:1999-10-01 00:00:00

  • Patterns of gene variation in central and marginal populations of Drosophila robusta.

    abstract::The central and marginal populations of D. robusta differ greatly in the level of inversion polymorphism; the marginal populations are monomorphic or nearly so and the central populations are highly polymorphic. This paper presents the frequencies of alleles at forty gene loci in various populations of D. robusta, stu...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Prakash S

    更新日期:1973-10-01 00:00:00

  • Slipped-strand mispairing at noncontiguous repeats in Poecilia reticulata: a model for minisatellite birth.

    abstract::The standard slipped-strand mispairing (SSM) model for the formation of variable number tandem repeats (VNTRs) proposes that a few tandem repeats, produced by chance mutations, provide the "raw material" for VNTR expansion. However, this model is unlikely to explain the formation of VNTRs with long motifs (e.g., minis...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Taylor JS,Breden F

    更新日期:2000-07-01 00:00:00

  • Assessing the relative rate of (mitochondrial) genomic change.

    abstract::I report a framework for assessing whether one mitochondrial genome is significantly more rearranged than another. This relative rate of gene rearrangement test (RGR) behaves according to expectation, distinguishing between highly rearranged and mildly rearranged insect mitochondrial genomes. It may be more broadly ap...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.103.024885

    authors: Dowton M

    更新日期:2004-06-01 00:00:00

  • Preferential mating in symmetric multilocus systems: stability conditions of the central equilibrium.

    abstract::Several multilocus models that incorporate both preferential mating and viability selection are studied. Specifically, a class of symmetric heterozygosity models are considered that assign individuals to phenotypic classes according to which loci are in heterozygous state regardless of the actual allelic content. Othe...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Karlin S,Raper J

    更新日期:1982-01-01 00:00:00

  • Rare deep-rooting Y chromosome lineages in humans: lessons for phylogeography.

    abstract::There has been considerable debate on the geographic origin of the human Y chromosome Alu polymorphism (YAP). Here we report a new, very rare deep-rooting haplogroup within the YAP clade, together with data on other deep-rooting YAP clades. The new haplogroup, found so far in only five Nigerians, is the least-derived ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Weale ME,Shah T,Jones AL,Greenhalgh J,Wilson JF,Nymadawa P,Zeitlin D,Connell BA,Bradman N,Thomas MG

    更新日期:2003-09-01 00:00:00

  • Multiple meiotic drive systems in the Drosophila melanogaster male.

    abstract::The behaviour of two "meiotic drive" systems, Segregation-Distorter (SD) and the sex chromosome sc(4)sc(8) has been examined in the same meiocyte. It has been found that the two systems interact in a specific way. When the distorting effects of SD and sc(4)sc(8) are against each other, there is no detectable interacti...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Miklos GL,Yanders AF,Peacock WJ

    更新日期:1972-09-01 00:00:00

  • Genetic characterization of the sufj frameshift suppressor in Salmonella typhimurium.

    abstract::A new suppressor of +1 frameshift mutations has been isolated in Salmonella typhimurium. This suppressor, sufJ, maps at minute 89 on the Salmonella genetic map between the argH and rpo(rif) loci, closely linked to the gene for the ochre suppressor tyrU(supM). The suppressor mutation is dominant to its wild-type allele...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Bossi L,Kohno T,Roth JR

    更新日期:1983-01-01 00:00:00