DNA recognition code of transcription factors in the helix-turn-helix, probe helix, hormone receptor, and zinc finger families.

Abstract:

:We have previously reported that in four transcription factor families the DNA-recognition rules can be described as (i) chemical rules, which list possible pairings between the 20 amino acid residues and the four DNA bases, and (ii) stereochemical rules, which describe the base and amino acid positions in contact. We have incorporated these rules into a computer program and examined the nature of the rules. Here we conclude that the DNA recognition rules are simple, logical, and consistent. The rules are specific enough to predict DNA-binding characteristics from a protein sequence.

authors

Suzuki M,Yagi N

doi

10.1073/pnas.91.26.12357

subject

Has Abstract

pub_date

1994-12-20 00:00:00

pages

12357-61

issue

26

eissn

0027-8424

issn

1091-6490

journal_volume

91

pub_type

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