Abstract：
:Globally, chickpea production is severely affected by salinity stress. Understanding the genetic basis for salinity tolerance is important to develop salinity tolerant chickpeas. A recombinant inbred line (RIL) population developed using parental lines ICCV 10 (salt-tolerant) and DCP 92-3 (salt-sensitive) was screened under field conditions to collect information on agronomy, yield components, and stress tolerance indices. Genotyping data generated using Axiom®CicerSNP array was used to construct a linkage map comprising 1856 SNP markers spanning a distance of 1106.3 cM across eight chickpea chromosomes. Extensive analysis of the phenotyping and genotyping data identified 28 quantitative trait loci (QTLs) explaining up to 28.40% of the phenotypic variance in the population. We identified QTL clusters on CaLG03 and CaLG06, each harboring major QTLs for yield and yield component traits under salinity stress. The main-effect QTLs identified in these two clusters were associated with key genes such as calcium-dependent protein kinases, histidine kinases, cation proton antiporter, and WRKY and MYB transcription factors, which are known to impart salinity stress tolerance in crop plants. Molecular markers/genes associated with these major QTLs, after validation, will be useful to undertake marker-assisted breeding for developing better varieties with salinity tolerance.
journal_name
Int J Mol Scijournal_title
International journal of molecular sciencesauthors
Soren KR,Madugula P,Kumar N,Barmukh R,Sengar MS,Bharadwaj C,Sharma PC,Singh S,Bhandari A,Singh J,Sanwal SK,Pal M,P R SP,Mann A,Sagurthi SR,Ps S,Siddique KHM,Singh NP,Roorkiwal M,Varshney RKdoi
10.3390/ijms21145058subject
Has Abstractpub_date
2020-07-17 00:00:00issue
14issn
1422-0067pii
ijms21145058journal_volume
21pub_type
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