From In Silico to Experimental Validation: Tailoring Peptide Substrates for a Serine Protease.

Abstract:

:Smart nanocarriers for the transport of drugs to tumor cells are nowadays of great interest for treating cancer. The use of enzymatic stimuli to cleave peptide-based drug nanocapsules for the selective release of nanocapsule cargo in close proximity to tumor cells opens new possibilities in cancer research. In the present work, we demonstrate a methodology for finding and optimizing cleavable substrate sequences by the type II transmembrane serine protease hepsin, which is highly overexpressed in prostate cancer. The design and screening of combinatorial libraries in silico against the binding cavity of hepsin allow the identification of a panel of promising substrates with high-calculated docking scores. In vitro screening verifies the predictions and showed that all substrates are cleaved by hepsin with higher efficiency than the literature known hepsin substrate RQLR↓VVGG. The introduction of d-amino acids on a selected peptide with the highest catalytic efficiency (kcat/Km) renders it resistant to cleavage by plasma or serum while maintaining their susceptibility to hepsin.

journal_name

Biomacromolecules

journal_title

Biomacromolecules

authors

Knaff PM,Kersten C,Willbold R,Champanhac C,Crespy D,Wittig R,Landfester K,Mailänder V

doi

10.1021/acs.biomac.0c00240

subject

Has Abstract

pub_date

2020-04-13 00:00:00

pages

1636-1643

issue

4

eissn

1525-7797

issn

1526-4602

journal_volume

21

pub_type

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