The Use of Whole Exome Sequencing in a Cohort of Transgender Individuals to Identify Rare Genetic Variants.

Abstract:

:Approximately 0.5-1.4% of natal males and 0.2-0.3% of natal females meet DSM-5 criteria for gender dysphoria, with many of these individuals self-describing as transgender men or women. Despite recent improvements both in social acceptance of transgender individuals as well as access to gender affirming therapy, progress in both areas has been hampered by poor understanding of the etiology of gender dysphoria. Prior studies have suggested a genetic contribution to gender dysphoria, but previously proposed candidate genes have not yet been verified in follow-up investigation. In this study, we expand on the topic of gender identity genomics by identifying rare variants in genes associated with sexually dimorphic brain development and exploring how they could contribute to gender dysphoria. To accomplish this, we performed whole exome sequencing on the genomic DNA of 13 transgender males and 17 transgender females. Whole exome sequencing revealed 120,582 genetic variants. After filtering, 441 variants in 421 genes remained for further consideration, including 21 nonsense, 28 frameshift, 13 splice-region, and 225 missense variants. Of these, 21 variants in 19 genes were found to have associations with previously described estrogen receptor activated pathways of sexually dimorphic brain development. These variants were confirmed by Sanger Sequencing. Our findings suggest a new avenue for investigation of genes involved in estrogen signaling pathways related to sexually dimorphic brain development and their relationship to gender dysphoria.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Theisen JG,Sundaram V,Filchak MS,Chorich LP,Sullivan ME,Knight J,Kim HG,Layman LC

doi

10.1038/s41598-019-53500-y

subject

Has Abstract

pub_date

2019-12-27 00:00:00

pages

20099

issue

1

issn

2045-2322

pii

10.1038/s41598-019-53500-y

journal_volume

9

pub_type

杂志文章
  • The impact of injury on apparent survival of whale sharks (Rhincodon typus) in South Ari Atoll Marine Protected Area, Maldives.

    abstract::The whale shark (Rhincodon typus) is an endangered species with a declining global population. The South Ari Atoll Marine Protected Area (SAMPA), Maldives, is one of few locations globally where year-long residency of individuals occurs. This SAMPA aggregation appears to consist almost exclusively of immature males. D...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-79101-8

    authors: Harvey-Carroll J,Stewart JD,Carroll D,Mohamed B,Shameel I,Zareer IH,Araujo G,Rees R

    更新日期:2021-01-13 00:00:00

  • Soluble OX40L and JAG1 Induce Selective Proliferation of Functional Regulatory T-Cells Independent of canonical TCR signaling.

    abstract::Regulatory T-cells (Tregs) play a pivotal role in maintaining peripheral tolerance. Increasing Treg numbers/functions has been shown to ameliorate autoimmune diseases. However, common Treg expansion approaches use T-Cell Receptor (TCR)-mediated stimulation which also causes proliferation of effector T-cells (Teff). To...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep39751

    authors: Kumar P,Alharshawi K,Bhattacharya P,Marinelarena A,Haddad C,Sun Z,Chiba S,Epstein AL,Prabhakar BS

    更新日期:2017-01-03 00:00:00

  • Genome-wide analysis of tomato long non-coding RNAs and identification as endogenous target mimic for microRNA in response to TYLCV infection.

    abstract::Recently, a large number of long noncoding RNAs (lncRNAs) have emerged as important regulators of many biological processes in animals and plants. However, how lncRNAs function during plant DNA virus infection is largely unknown. We performed strand-specific paired-end RNA sequencing of tomato samples infected with To...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep16946

    authors: Wang J,Yu W,Yang Y,Li X,Chen T,Liu T,Ma N,Yang X,Liu R,Zhang B

    更新日期:2015-12-18 00:00:00

  • Artemether ameliorates kidney injury by restoring redox imbalance and improving mitochondrial function in Adriamycin nephropathy in mice.

    abstract::The kidney is a high-energy demand organ rich in mitochondria especially renal tubular cells. Emerging evidence suggests that mitochondrial dysfunction, redox imbalance and kidney injury are interconnected. Artemether has biological effects by targeting mitochondria and exhibits potential therapeutic value for kidney ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80298-x

    authors: Han P,Cai Y,Wang Y,Weng W,Chen Y,Wang M,Zhan H,Yu X,Wang T,Shao M,Sun H

    更新日期:2021-01-14 00:00:00

  • Black P/graphene hybrid: A fast response humidity sensor with good reversibility and stability.

    abstract::Black phosphorus (BP) materials have attracted considerable attention owing to their ultra-sensitive humidity sensing characteristics because of the natural absorption of water (H2O) molecules on the BP surface caused by the specific 2D layer-crystalline structure. On the other hand, the BP-based humidity sensor is le...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-10848-3

    authors: Phan DT,Park I,Park AR,Park CM,Jeon KJ

    更新日期:2017-09-05 00:00:00

  • Publisher Correction: Manipulation of Rat Movement via Nigrostriatal Stimulation Controlled by Human Visually Evoked Potentials.

    abstract::A correction to this article has been published and is linked from the HTML version of this paper. The error has been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 杂志文章,已发布勘误

    doi:10.1038/s41598-017-14994-6

    authors: Koo B,Koh CS,Park HY,Lee HG,Chang JW,Choi S,Shin HC

    更新日期:2017-12-19 00:00:00

  • Cytotoxicity of thymoquinone alone or in combination with cisplatin (CDDP) against oral squamous cell carcinoma in vitro.

    abstract::Cisplatin (CDDP) is potent anticancer agent used for several tumor types. Thymoquinone (TQ) is naturally occurring compound drawing great attention as anticancer and chemomodulator for chemotherapies. Herein, we studied the potential cytotoxicity of thymoquinone, CDDP and their combination against human oral squamous ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-13357-5

    authors: Alaufi OM,Noorwali A,Zahran F,Al-Abd AM,Al-Attas S

    更新日期:2017-10-13 00:00:00

  • Defining eligible patients for allele-selective chemotherapies targeting NAT2 in colorectal cancer.

    abstract::Therapies targeting somatic bystander genetic events represent a new avenue for cancer treatment. We recently identified a subset of colorectal cancer (CRC) patients who are heterozygous for a wild-type and a low activity allele (NAT2*6) but lack the wild-type allele in their tumors due to loss of heterozygosity (LOH)...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80288-z

    authors: Rendo V,Kundu S,Rameika N,Ljungström V,Svensson R,Palin K,Aaltonen L,Stoimenov I,Sjöblom T

    更新日期:2020-12-31 00:00:00

  • Selective spatial attention modulates bottom-up informational masking of speech.

    abstract::To hear out a conversation against other talkers listeners overcome energetic and informational masking. Largely attributed to top-down processes, information masking has also been demonstrated using unintelligible speech and amplitude-modulated maskers suggesting bottom-up processes. We examined the role of speech-li...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep08662

    authors: Carlile S,Corkhill C

    更新日期:2015-03-02 00:00:00

  • Conformational changes influence clogging behavior of micrometer-sized microgels in idealized multiple constrictions.

    abstract::Clogging of porous media by soft particles has become a subject of extensive research in the last years and the understanding of the clogging mechanisms is of great importance for process optimization. The rise in the utilization of microfluidic devices brought the possibility to simulate membrane filtration and perfo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-45791-y

    authors: Bouhid de Aguiar I,Meireles M,Bouchoux A,Schroën K

    更新日期:2019-06-25 00:00:00

  • Formation of somatosensory detour circuits mediates functional recovery following dorsal column injury.

    abstract::Anatomically incomplete spinal cord injuries can be followed by functional recovery mediated, in part, by the formation of intraspinal detour circuits. Here, we show that adult mice recover tactile and proprioceptive function following a unilateral dorsal column lesion. We therefore investigated the basis of this reco...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-67866-x

    authors: Granier C,Schwarting J,Fourli E,Laage-Gaupp F,Hennrich AA,Schmalz A,Jacobi A,Wesolowski M,Conzelmann KK,Bareyre FM

    更新日期:2020-07-02 00:00:00

  • Automated data cleaning of paediatric anthropometric data from longitudinal electronic health records: protocol and application to a large patient cohort.

    abstract::'Big data' in healthcare encompass measurements collated from multiple sources with various degrees of data quality. These data require quality control assessment to optimise quality for clinical management and for robust large-scale data analysis in healthcare research. Height and weight data represent one of the mos...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66925-7

    authors: Phan HTT,Borca F,Cable D,Batchelor J,Davies JH,Ennis S

    更新日期:2020-06-23 00:00:00

  • Circadian and Homeostatic Modulation of Multi-Unit Activity in Midbrain Dopaminergic Structures.

    abstract::Although the link between sleep disturbances and dopamine (DA)-related neurological and neuropsychiatric disorders is well established, the impact of sleep alterations on neuronal activity of midbrain DA-ergic structures is currently unknown. Here, using wildtype C57Bl mice, we investigated the circadian- and sleep-re...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-25770-5

    authors: Fifel K,Meijer JH,Deboer T

    更新日期:2018-05-17 00:00:00

  • Characterisation of the Cyanate Inhibited State of Cytochrome c Oxidase.

    abstract::Heme-copper oxygen reductases are terminal respiratory enzymes, catalyzing the reduction of dioxygen to water and the translocation of protons across the membrane. Oxygen consumption is inhibited by various substances. Here we tested the relatively unknown inhibition of cytochrome c oxidase (CcO) with isocyanate. In c...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-60801-0

    authors: Kruse F,Nguyen AD,Dragelj J,Schlesinger R,Heberle J,Mroginski MA,Weidinger IM

    更新日期:2020-03-02 00:00:00

  • Log-normal diameter distribution of Pd-based metallic glass droplet and wire.

    abstract::We have studied the formation of Pd42.5Cu30Ni7.5P20 metallic glass droplets and wires in the gas atomization process. We demonstrate that the sizes of droplets and wires can be distinguished by the Ohnesorge number (Oh), which is the proportion of the spinnability to the capillary instability, and the diameter distrib...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep10711

    authors: Yaginuma S,Nakajima C,Kaneko N,Yokoyama Y,Nakayama KS

    更新日期:2015-06-01 00:00:00

  • Magnetic nanoantioxidants with improved radical-trapping stoichiometry as stabilizers for inhibition of peroxide formation in ethereal solvents.

    abstract::Graphite-coated magnetic cobalt nanoparticles (CoNPs) decorated with hindered phenolic antioxidant analogues of 2,6-di-tert-butyl-4-methylphenol (BHT, E321) provided easily removable nanoantioxidants capable of preventing the autoxidation of organic solvents as tetrahydrofuran (THF). ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-53531-5

    authors: Viglianisi C,Scarlini A,Tofani L,Menichetti S,Baschieri A,Amorati R

    更新日期:2019-11-20 00:00:00

  • Geochemical Evidence for the Control of Fire by Middle Palaeolithic Hominins.

    abstract::The use of fire played an important role in the social and technological development of the genus Homo. Most archaeologists agree that this was a multi-stage process, beginning with the exploitation of natural fires and ending with the ability to create fire from scratch. Some have argued that in the Middle Palaeolith...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-51433-0

    authors: Brittingham A,Hren MT,Hartman G,Wilkinson KN,Mallol C,Gasparyan B,Adler DS

    更新日期:2019-10-25 00:00:00

  • Guanosine tetraphosphate relieves the negative regulation of Salmonella pathogenicity island-2 gene transcription exerted by the AT-rich ssrA discriminator region.

    abstract::The repressive activity of ancestral histone-like proteins helps integrate transcription of foreign genes with discrepant AT content into existing regulatory networks. Our investigations indicate that the AT-rich discriminator region located between the -10 promoter element and the transcription start site of the regu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-27780-9

    authors: Tapscott T,Kim JS,Crawford MA,Fitzsimmons L,Liu L,Jones-Carson J,Vázquez-Torres A

    更新日期:2018-06-21 00:00:00

  • Transcriptomics reveals multiple resistance mechanisms against cotton leaf curl disease in a naturally immune cotton species, Gossypium arboreum.

    abstract::Cotton leaf curl disease (CLCuD), caused by cotton leaf curl viruses (CLCuVs), is among the most devastating diseases in cotton. While the widely cultivated cotton species Gossypium hirsutum is generally susceptible, the diploid species G. arboreum is a natural source for resistance against CLCuD. However, the influen...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-15963-9

    authors: Naqvi RZ,Zaidi SS,Akhtar KP,Strickler S,Woldemariam M,Mishra B,Mukhtar MS,Scheffler BE,Scheffler JA,Jander G,Mueller LA,Asif M,Mansoor S

    更新日期:2017-11-21 00:00:00

  • Mendelian Randomization Analysis Support Causal Associations of HbA1c with Circulating Triglyceride, Total and Low-density Lipoprotein Cholesterol in a Chinese Population.

    abstract::Previous observational studies supported a positive association of glycated hemoglobin A1c (HbA1c) level with serum triglyceride (TG), total cholesterol (TC), low-density lipoprotein cholesterol (LDL-C), and high-density lipoprotein cholesterol (HDL-C). However, the causal relationship between HbA1c and either one of ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-41076-6

    authors: Jia X,Hou Y,Xu M,Zhao Z,Xuan L,Wang T,Li M,Xu Y,Lu J,Bi Y,Wang W,Chen Y

    更新日期:2019-04-02 00:00:00

  • In-plane Isotropic Microwave Performance of CoZr Trilayer in GHz Range.

    abstract::In this paper, we investigate the high frequency performance of Co90Zr10/SiO2/Co90Zr10 trilayers. It is demonstrated that the in-plane isotropic microwave performance is theoretically derived from the solution of the Landau-Lifshitz-Gilbert equation and experimentally achieved in that sandwich structured film. The val...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep21327

    authors: Pan L,Wang F,Wang W,Chai G,Xue D

    更新日期:2016-02-17 00:00:00

  • Molecular phylogeny and divergence times of Astragalus section Hymenostegis: An analysis of a rapidly diversifying species group in Fabaceae.

    abstract::The taxa of Astragalus section Hymenostegis are an important element of mountainous and steppe habitats in Southwest Asia. A phylogenetic hypothesis of sect. Hymenostegis has been obtained from nuclear ribosomal DNA internal transcribed spacer (ITS) and plastid ycf1 sequences of up to 303 individuals from 106 species,...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-14614-3

    authors: Bagheri A,Maassoumi AA,Rahiminejad MR,Brassac J,Blattner FR

    更新日期:2017-10-25 00:00:00

  • Prioritizing conservation actions in urbanizing landscapes.

    abstract::Urbanization-driven landscape changes are harmful to many species. Negative effects can be mitigated through habitat preservation and restoration, but it is often difficult to prioritize these conservation actions. This is due, in part, to the scarcity of species response data, which limit the predictive accuracy of m...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-79258-2

    authors: Ettinger AK,Buhle ER,Feist BE,Howe E,Spromberg JA,Scholz NL,Levin PS

    更新日期:2021-01-12 00:00:00

  • Differential brain mechanisms during reading human vs. machine translated fiction and news texts.

    abstract::Few neuroimaigng studies on reading comprehension have been conducted under natural reading settings. In this study, we showed texts presented in a natural way during functional MRI (fMRI) measurements to reveal brain areas sensitive to reading comprehension. Specifically, this paradigm independently manipulated two h...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49632-w

    authors: Lin FH,Liu YF,Lee HJ,Chang CHC,Jaaskelainen IP,Yeh JN,Kuo WJ

    更新日期:2019-09-13 00:00:00

  • Infrared photodetector sensitized by InAs quantum dots embedded near an Al0.3Ga0.7As/GaAs heterointerface.

    abstract::Mid-infrared sensors detect infrared radiation emitted from objects, and are actually widely used for monitoring gases and moisture as well as for imaging objects at or above room temperature. Infrared photodetectors offer fast detection, but many devices cannot provide high responsivity at room temperature. Here we d...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-68461-w

    authors: Murata T,Asahi S,Sanguinetti S,Kita T

    更新日期:2020-07-15 00:00:00

  • Signatures of adaptation and symbiosis in genomes and transcriptomes of Symbiodinium.

    abstract::Symbiodinium is best-known as the photosynthetic symbiont of corals, but some clades are symbiotic in other organisms or include free-living forms. Identifying similarities and differences among these clades can help us understand their relationship with corals, and thereby inform on measures to manage coral reefs in ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-15029-w

    authors: González-Pech RA,Ragan MA,Chan CX

    更新日期:2017-11-03 00:00:00

  • Experimental, quantum chemical and molecular dynamic simulations studies on the corrosion inhibition of mild steel by some carbazole derivatives.

    abstract::Five selected carbazole derivatives, namely carbazole, 3,6-dibromocarbazole, 2-hydroxycarbazole, 1,2,3,4-tetrahydrocarbazole and 9-(2-ethylhexyl)carbazole-3,6-dicarboxaldehyde were investigated for their inhibitive effects on Desulfovibrio vulgaris (D. vulgaris) induced corrosion of mild steel and in 1 M HCl medium us...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-02446-0

    authors: Nwankwo HU,Olasunkanmi LO,Ebenso EE

    更新日期:2017-05-26 00:00:00

  • Comprehensive studies on the properties of apple juice treated by non-thermal atmospheric plasma in a flow-through system.

    abstract::We present an optimized non-thermal atmospheric plasma (NTAP)-based reaction-discharge system that was applied for a continuous-flow treatment of apple juice (AJ). To optimize this system for a high-throughput production of AJ with ameliorated properties, the effect of several parameters was studied using design of ex...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-78131-6

    authors: Dzimitrowicz A,Bielawska-Pohl A,Pohl P,Cyganowski P,Motyka-Pomagruk A,Klis T,Policht M,Klimczak A,Jamroz P

    更新日期:2020-12-03 00:00:00

  • Spatial separation of catches in highly mixed fisheries.

    abstract::Mixed fisheries are the dominant type of fishery worldwide. Overexploitation in mixed fisheries occurs when catches continue for available quota species while low quota species are discarded. As EU fisheries management moves to count all fish caught against quota (the "landing obligation"), the challenge is to catch a...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-31881-w

    authors: Dolder PJ,Thorson JT,Minto C

    更新日期:2018-09-17 00:00:00

  • Assessment of different techniques for 3D superimposition of serial digital maxillary dental casts on palatal structures.

    abstract::Serial 3-dimensional dental model superimposition provides a risk-free, detailed evaluation of morphological alterations on a patient's mouth. Here, we evaluated accuracy and precision of five palatal areas, used for superimposition of maxillary 3D digital dental casts. Sixteen pre- and post-orthodontic treatment dent...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-06013-5

    authors: Vasilakos G,Schilling R,Halazonetis D,Gkantidis N

    更新日期:2017-07-19 00:00:00