Anthropogenic pressures drive population genetic structuring across a Critically Endangered lemur species range.

Abstract:

:In recent decades Madagascar has experienced significant habitat loss and modification, with minimal understanding of how human land use practices have impacted the evolution of its flora and fauna. In light of ongoing and intensifying anthropogenic pressures, we seek new insight into mechanisms driving genetic variability on this island, using a Critically Endangered lemur species, the black-and-white ruffed lemur (Varecia variegata), as a test case. Here, we examine the relative influence of natural and anthropogenic landscape features that we predict will impose barriers to dispersal and promote genetic structuring across the species range. Using circuit theory, we model functional connectivity among 18 sampling localities using population-based genetic distance (FST). We optimized resistance surfaces using genetic algorithms and assessed their performance using maximum-likelihood population-effects mixed models. The best supported resistance model was a composite surface that included two anthropogenic features, habitat cover and distance to villages, suggesting that rapid land cover modification by humans has driven change in the genetic structure of wild lemurs. Primary conservation priority should be placed on mitigating further forest loss and connecting regions identified as having low dispersal potential to prevent further loss of genetic diversity and promote the survival of other moist forest specialists.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Baden AL,Mancini AN,Federman S,Holmes SM,Johnson SE,Kamilar J,Louis EE Jr,Bradley BJ

doi

10.1038/s41598-019-52689-2

subject

Has Abstract

pub_date

2019-11-07 00:00:00

pages

16276

issue

1

issn

2045-2322

pii

10.1038/s41598-019-52689-2

journal_volume

9

pub_type

杂志文章
  • Corrigendum: PTEN ameliorates autoimmune arthritis through down-regulating STAT3 activation with reciprocal balance of Th17 and Tregs.

    abstract::This corrects the article DOI: 10.1038/srep34617. ...

    journal_title:Scientific reports

    pub_type: 杂志文章,已发布勘误

    doi:10.1038/srep42267

    authors: Lee SH,Park JS,Byun JK,Jhun J,Jung K,Seo HB,Moon YM,Kim HY,Park SH,Cho ML

    更新日期:2017-09-27 00:00:00

  • Rapid colorimetric loop-mediated isothermal amplification for hypersensitive point-of-care Staphylococcus aureus enterotoxin A gene detection in milk and pork products.

    abstract::Staphylococcus aureus strains carrying enterotoxin A gene (sea) causes food poisoning and cannot be distinguished from non-pathogenic strains by the culture method. Here, we developed a rapid, specific and sensitive visual detection of sea using loop-mediated isothermal amplification (LAMP) combined with nanogold prob...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-64710-0

    authors: Srimongkol G,Ditmangklo B,Choopara I,Thaniyavarn J,Dean D,Kokpol S,Vilaivan T,Somboonna N

    更新日期:2020-05-08 00:00:00

  • Cold-inducible RNA-binding protein (CIRP) causes sepsis-associated acute lung injury via induction of endoplasmic reticulum stress.

    abstract::Cold-inducible RNA-binding protein (CIRP), released into the circulation during sepsis, causes lung injury via an as yet unknown mechanism. Since endoplasmic reticulum (ER) stress is associated with acute lung injury (ALI), we hypothesized that CIRP causes ALI via induction of ER stress. To test this hypothesis, we st...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep41363

    authors: Khan MM,Yang WL,Brenner M,Bolognese AC,Wang P

    更新日期:2017-01-27 00:00:00

  • Chemical and Microstructural Characterization of pH and [Ca2+] Dependent Sol-Gel Transitions in Mucin Biopolymer.

    abstract::Mucus is responsible for controlling transport and barrier function in biological systems, and its properties can be significantly affected by compositional and environmental changes. In this study, the impacts of pH and CaCl2 were examined on the solution-to-gel transition of mucin, the primary structural component o...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-65392-4

    authors: Curnutt A,Smith K,Darrow E,Walters KB

    更新日期:2020-05-29 00:00:00

  • Insight into the metabolic mechanism of Diterpene Ginkgolides on antidepressant effects for attenuating behavioural deficits compared with venlafaxine.

    abstract::Depression is a severe and chronic mental disorder, affecting about 322 million individuals worldwide. A recent study showed that diterpene ginkgolides (DG) have antidepressant-like effects on baseline behaviours in mice. Here, we examined the effects of DG and venlafaxine (VLX) in a chronic social defeat stress model...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-10391-1

    authors: Bai S,Zhang X,Chen Z,Wang W,Hu Q,Liang Z,Shen P,Gui S,Zeng L,Liu Z,Chen J,Xie X,Huang H,Han Y,Wang H,Xie P

    更新日期:2017-08-29 00:00:00

  • Charged giant unilamellar vesicles prepared by electroformation exhibit nanotubes and transbilayer lipid asymmetry.

    abstract::Giant unilamellar vesicles (GUVs) are increasingly used as a versatile research tool to investigate membrane structure, morphology and phase state. In these studies, GUV preparation is typically enhanced by an externally applied electric field, a process called electroformation. We find that upon osmotic deflation, GU...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-30286-z

    authors: Steinkühler J,De Tillieux P,Knorr RL,Lipowsky R,Dimova R

    更新日期:2018-08-07 00:00:00

  • Chronic kidney disease attenuates the impact of obesity on quality of life.

    abstract::The impact of obesity on health-related quality of life (HRQoL) in chronic kidney disease (CKD) population has not been elucidated, despite the impairment of HRQoL in the obese among general population. We hypothesized that the impact of obesity on HRQoL might be confounded by impaired renal function in CKD population...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-59382-9

    authors: Suh SH,Choi HS,Kim CS,Bae EH,Ma SK,Lee DH,Kim SW

    更新日期:2020-02-11 00:00:00

  • Intra and Inter-rater Reliability between Ultrasound Imaging and Caliper Measures to determine Spring Ligament Dimensions in Cadavers.

    abstract::The purpose was to evaluate intra and inter-rater reliability, repeatability and absolute accuracy between ultrasound imaging (US) and caliper measures to determine Spring ligament (SL) dimensions in cadavers. SLs were identified from 62 human feet from formaldehyde-embalmed cadavers. Intra and inter-observer reliabil...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-51384-6

    authors: Santiago-Nuño F,Palomo-López P,Becerro-de-Bengoa-Vallejo R,Calvo-Lobo C,Losa-Iglesias ME,Casado-Hernández I,López-López D

    更新日期:2019-10-15 00:00:00

  • Grain Boundary Specific Segregation in Nanocrystalline Fe(Cr).

    abstract::A cross-correlative precession electron diffraction - atom probe tomography investigation of Cr segregation in a Fe(Cr) nanocrystalline alloy was undertaken. Solute segregation was found to be dependent on grain boundary type. The results of which were compared to a hybrid Molecular Dynamics and Monte Carlo simulation...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34642

    authors: Zhou X,Yu XX,Kaub T,Martens RL,Thompson GB

    更新日期:2016-10-06 00:00:00

  • Author Correction: Antenatal IL-1-dependent inflammation persists postnatally and causes retinal and sub-retinal vasculopathy in progeny.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-020-63705-1

    authors: Beaudry-Richard A,Nadeau-Vallée M,Prairie É,Maurice N,Heckel É,Nezhady M,Pundir S,Madaan A,Boudreault A,Hou X,Quiniou C,Sierra EM,Beaulac A,Lodygensky G,Robertson SA,Keelan J,Adams Waldorf KM,Olson DM,Rivera JC,Lube

    更新日期:2020-04-15 00:00:00

  • Graphene Based Waveguide Polarizers: In-Depth Physical Analysis and Relevant Parameters.

    abstract::Optical polarizing devices exploiting graphene embedded in waveguides have been demonstrated in the literature recently and both the TE- and TM-pass behaviors were reported. The determination of the passing polarization is usually attributed to graphene's Fermi level (and, therefore, doping level), with, however, no d...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep16949

    authors: de Oliveira RE,de Matos CJ

    更新日期:2015-11-19 00:00:00

  • Stochastic growth pattern of untreated human glioblastomas predicts the survival time for patients.

    abstract::Glioblastomas are highly malignant brain tumors. Knowledge of growth rates and growth patterns is useful for understanding tumor biology and planning treatment logistics. Based on untreated human glioblastoma data collected in Trondheim, Norway, we first fit the average growth to a Gompertz curve, then find a best fit...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-63394-w

    authors: Ma Z,Niu B,Phan TA,Stensjøen AL,Ene C,Woodiwiss T,Wang T,Maini PK,Holland EC,Tian JP

    更新日期:2020-04-20 00:00:00

  • Interactive effect of sleep duration and sleep quality on risk of stroke: An 8-year follow-up study in China.

    abstract::Inappropriate sleep duration and poor sleep quality are associated with risk of stroke, but their interactive effect on stroke is unknown. We explored the interactive effect of sleep quality and duration on stroke risk. A prospective cohort study was conducted with 41,786 adults. Sleep quality was assessed using the P...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-65611-y

    authors: Ji A,Lou H,Lou P,Xu C,Zhang P,Qiao C,Yang Q

    更新日期:2020-05-26 00:00:00

  • The topology of higher-order complexes associated with brain hubs in human connectomes.

    abstract::Higher-order connectivity in complex systems described by simplexes of different orders provides a geometry for simplex-based dynamical variables and interactions. Simplicial complexes that constitute a functional geometry of the human connectome can be crucial for the brain complex dynamics. In this context, the best...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-74392-3

    authors: Andjelković M,Tadić B,Melnik R

    更新日期:2020-10-14 00:00:00

  • Birds and beans: Comparing avian richness and endemism in arabica and robusta agroforests in India's Western Ghats.

    abstract::Coffee is a major tropical commodity crop that can provide supplementary habitat for native wildlife. In Asia, coffee production is an increasingly important driver of landscape transformation and shifts between different coffee species is a major dimension of agroforestry trends. Yet few studies have compared the eco...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-21401-1

    authors: Chang CH,Karanth KK,Robbins P

    更新日期:2018-02-16 00:00:00

  • Structural insights into the ability of nucleoplasmin to assemble and chaperone histone octamers for DNA deposition.

    abstract::Nucleoplasmin (NP) is a pentameric histone chaperone that regulates the condensation state of chromatin in different cellular processes. We focus here on the interaction of NP with the histone octamer, showing that NP could bind sequentially the histone components to assemble an octamer-like particle, and crosslinked ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-45726-7

    authors: Franco A,Arranz R,Fernández-Rivero N,Velázquez-Campoy A,Martín-Benito J,Segura J,Prado A,Valpuesta JM,Muga A

    更新日期:2019-07-01 00:00:00

  • Genomic insights into the population structure and history of the Irish Travellers.

    abstract::The Irish Travellers are a population with a history of nomadism; consanguineous unions are common and they are socially isolated from the surrounding, 'settled' Irish people. Low-resolution genetic analysis suggests a common Irish origin between the settled and the Traveller populations. What is not known, however, i...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep42187

    authors: Gilbert E,Carmi S,Ennis S,Wilson JF,Cavalleri GL

    更新日期:2017-02-09 00:00:00

  • Facile construction of a highly sensitive DNA biosensor by in-situ assembly of electro-active tags on hairpin-structured probe fragment.

    abstract::An ultrasensitive DNA biosensor has been developed through in-situ labeling of electroactive melamine-Cu(2+) complex (Mel-Cu(2+)) on the end of hairpin-like probe using gold nanoparticles (AuNPs) as the signal amplification platform. The 3'-thiolated hairpin-like probe was first immobilized to the gold electrode surfa...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep22441

    authors: Wang Q,Gao F,Ni J,Liao X,Zhang X,Lin Z

    更新日期:2016-03-02 00:00:00

  • Field sampling marine plankton for biodiscovery.

    abstract::Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of no...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-15980-8

    authors: Ingebrigtsen RA,Hansen E,Andersen JH,Eilertsen HC

    更新日期:2017-11-20 00:00:00

  • Cortico-subcortical metabolic correlates of olfactory processing in healthy resting subjects.

    abstract::A wide network of interconnected areas was previously found in neuroimaging studies involving normal as well as pathological subjects; however literature seems to suffer from a lack of investigation in glucose metabolism behaviour under olfactory condition. Thus, the present work describe for the first time a pure olf...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep05146

    authors: Alessandrini M,Micarelli A,Chiaravalloti A,Candidi M,Bruno E,Di Pietro B,Schillaci O,Pagani M

    更新日期:2014-06-03 00:00:00

  • Author Correction: Activation of endothelial β-catenin signaling induces heart failure.

    abstract::A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has not been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-018-34062-x

    authors: Nakagawa A,Naito AT,Sumida T,Nomura S,Shibamoto M,Higo T,Okada K,Sakai T,Hashimoto A,Kuramoto Y,Oka T,Lee JK,Harada M,Ueda K,Shiojima I,Limbourg FP,Adams RH,Noda T,Sakata Y,Akazawa H,Komuro I

    更新日期:2018-10-29 00:00:00

  • Generation of a planar direct-current glow discharge in atmospheric pressure air using rod array electrode.

    abstract::Scaling up atmospheric pressure glow discharge to large volume is desirable for low-temperature plasma applications. In this paper, an approach to generate a glow discharge in a planar shape with a fairly large volume is proposed in atmospheric pressure air through utilizing a direct-current excited rod array electrod...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-03007-1

    authors: Li X,Zhang P,Jia P,Chu J,Chen J

    更新日期:2017-06-01 00:00:00

  • Electronic Health Record Driven Prediction for Gestational Diabetes Mellitus in Early Pregnancy.

    abstract::Gestational diabetes mellitus (GDM) is conventionally confirmed with oral glucose tolerance test (OGTT) in 24 to 28 weeks of gestation, but it is still uncertain whether it can be predicted with secondary use of electronic health records (EHRs) in early pregnancy. To this purpose, the cost-sensitive hybrid model (CSHM...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-16665-y

    authors: Qiu H,Yu HY,Wang LY,Yao Q,Wu SN,Yin C,Fu B,Zhu XJ,Zhang YL,Xing Y,Deng J,Yang H,Lei SD

    更新日期:2017-11-27 00:00:00

  • Transmission patterns of HIV-1 non-R5 strains in Poland.

    abstract::HIV-1 env sequencing enables predictions of viral coreceptor tropism and phylogenetic investigations of transmission events. The aim of the study was to estimate the contribution of non-R5 strains to the viral spread in Poland. Partial proviral env sequences were retrieved from baseline blood samples of patients with ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-41407-7

    authors: Smoleń-Dzirba J,Rosińska M,Kruszyński P,Janiec J,Cycoń M,Bratosiewicz-Wąsik J,Beniowski M,Bociąga-Jasik M,Jabłonowska E,Szetela B,Wąsik TJ

    更新日期:2019-03-21 00:00:00

  • Positioning of the SCRAMBLED receptor requires UDP-Glc:sterol glucosyltransferase 80B1 in Arabidopsis roots.

    abstract::The biological function of sterol glucosides (SGs), the most abundant sterol derivatives in higher plants, remains uncertain. In an effort to improve our understanding of these membrane lipids we examined phenotypes exhibited by the roots of Arabidopsis (Arabidopsis thaliana) lines carrying insertions in the UDP-Glc:s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-05925-6

    authors: Pook VG,Nair M,Ryu K,Arpin JC,Schiefelbein J,Schrick K,DeBolt S

    更新日期:2017-07-18 00:00:00

  • Two-photon interference of temporally separated photons.

    abstract::We present experimental demonstrations of two-photon interference involving temporally separated photons within two types of interferometers: a Mach-Zehnder interferometer and a polarization-based Michelson interferometer. The two-photon states are probabilistically prepared in a symmetrically superposed state within ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34805

    authors: Kim H,Lee SM,Moon HS

    更新日期:2016-10-06 00:00:00

  • The application of a biostimulant based on tannins affects root architecture and improves tolerance to salinity in tomato plants.

    abstract::Roots have important roles for plants to withstand adverse environmental conditions, including salt stress. Biostimulant application was shown to enhance plant resilience towards abiotic stresses. Here, we studied the effect of a tannin-based biostimulant on tomato (Solanum lycopersicum L.) grown under salt stress con...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-79770-5

    authors: Campobenedetto C,Mannino G,Beekwilder J,Contartese V,Karlova R,Bertea CM

    更新日期:2021-01-11 00:00:00

  • K-core robustness in ecological and financial networks.

    abstract::In many real-world networks, the ability to withstand targeted or global attacks; extinctions; or shocks is vital to the survival of the network itself, and of dependent structures such as economies (for financial networks) or even the planet (for ecosystems). Previous attempts to characterise robustness include neste...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-59959-4

    authors: Burleson-Lesser K,Morone F,Tomassone MS,Makse HA

    更新日期:2020-02-25 00:00:00

  • Giant and reversible room-temperature elastocaloric effect in a single-crystalline Ni-Fe-Ga magnetic shape memory alloy.

    abstract::Good mechanical properties and large adiabatic temperature change render Heusler-type Ni2FeGa-based magnetic shape memory alloys as a promising candidate material for solid-state mechanical cooling application at ambient conditions. Superelastic behavior and associated elastocaloric effect strongly reply on deformatio...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep25500

    authors: Li Y,Zhao D,Liu J

    更新日期:2016-05-03 00:00:00

  • Joint genome-wide association and transcriptome sequencing reveals a complex polygenic network underlying hypocotyl elongation in rapeseed (Brassica napus L.).

    abstract::Hypocotyl elongation is considered an important typical seedling trait contributing directly to an increase in and stabilization of the yield in Brassica napus, but its molecular genetic mechanism is poorly understood. In the present study, hypocotyl lengths of 210 lines were measured in an illuminated culture room. A...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep41561

    authors: Luo X,Xue Z,Ma C,Hu K,Zeng Z,Dou S,Tu J,Shen J,Yi B,Fu T

    更新日期:2017-01-31 00:00:00