Stress Marks on the Genome: Use or Lose?

Abstract:

:Oxidative stress and the resulting damage to DNA are inevitable consequence of endogenous physiological processes further amplified by cellular responses to environmental exposures. If left unrepaired, oxidative DNA lesions can block essential processes such as transcription and replication or can induce mutations. Emerging data also indicate that oxidative base modifications such as 8-oxoG in gene promoters may serve as epigenetic marks, and/or provide a platform for coordination of the initial steps of DNA repair and the assembly of the transcriptional machinery to launch adequate gene expression alterations. Here, we briefly review the current understanding of oxidative lesions in genome stability maintenance and regulation of basal and inducible transcription.

journal_name

Int J Mol Sci

authors

Bokhari B,Sharma S

doi

10.3390/ijms20020364

subject

Has Abstract

pub_date

2019-01-16 00:00:00

issue

2

issn

1422-0067

pii

ijms20020364

journal_volume

20

pub_type

杂志文章,评审
  • Bone Regeneration Using Adipose-Derived Stem Cells in Injectable Thermo-Gelling Hydrogel Scaffold Containing Platelet-Rich Plasma and Biphasic Calcium Phosphate.

    abstract::For bone regeneration, a biocompatible thermo-gelling hydrogel, hyaluronic acid-g-chitosan-g-poly(N-isopropylacrylamide) (HA-CPN) was used as a three-dimensional organic gel matrix for entrapping rabbit adipose-derived stem cells (rASCs). Biphasic calcium phosphate (BCP) ceramic microparticles were embedded within the...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms19092537

    authors: Liao HT,Tsai MJ,Brahmayya M,Chen JP

    更新日期:2018-08-27 00:00:00

  • The Aryl Hydrocarbon Receptor in Asthma: Friend or Foe?

    abstract::The aryl hydrocarbon receptor (AhR) is a ligand-activated transcription factor that has emerged as an important player in asthma control. AhR is responsive to environmental molecules and endogenous or dietary metabolites and regulates innate and adaptive immune responses. Binding of this receptor by different ligands ...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms21228797

    authors: Poulain-Godefroy O,Bouté M,Carrard J,Alvarez-Simon D,Tsicopoulos A,de Nadai P

    更新日期:2020-11-20 00:00:00

  • In Silico Insights towards the Identification of NLRP3 Druggable Hot Spots.

    abstract::NLRP3 (NOD-like receptor family, pyrin domain-containing protein 3) activation has been linked to several chronic pathologies, including atherosclerosis, type-II diabetes, fibrosis, rheumatoid arthritis, and Alzheimer's disease. Therefore, NLRP3 represents an appealing target for the development of innovative therapeu...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms20204974

    authors: Mekni N,De Rosa M,Cipollina C,Gulotta MR,De Simone G,Lombino J,Padova A,Perricone U

    更新日期:2019-10-09 00:00:00

  • The Role of Vitamin D in Thyroid Diseases.

    abstract::The main role of vitamin D is regulating bone metabolism and calcium and phosphorus homeostasis. Over the past few decades, the importance of vitamin D in non-skeletal actions has been studied, including the role of vitamin D in autoimmune diseases, metabolic syndromes, cardiovascular disease, cancers, and all-cause m...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms18091949

    authors: Kim D

    更新日期:2017-09-12 00:00:00

  • Biological activities of Toninia candida and Usnea barbata together with their norstictic acid and usnic acid constituents.

    abstract::The aim of this study was to investigate the chemical composition of acetone extracts of the lichens Toninia candida and Usnea barbata and in vitro antioxidant, antimicrobial, and anticancer activities of these extracts together with some of their major metabolites. The chemical composition of T. candida and U. barbat...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms131114707

    authors: Ranković B,Kosanić M,Stanojković T,Vasiljević P,Manojlović N

    更新日期:2012-11-12 00:00:00

  • The Multiplicity of Infection-Dependent Effects of Recombinant Adenovirus Carrying HGF Gene on the Proliferation and Osteogenic Differentiation of Human Bone Marrow Mesenchymal Stem Cells.

    abstract::Absence of effective therapeutic methods for avascular necrosis of femoral head (ANFH) is still perplexing the world's medical community. Bone marrow mesenchymal stem cells (BMSCs) adoptive cell therapy combined with core decompression is a promising modality, which is highly dependent on the cellular activities of BM...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms19030734

    authors: Wen Q,Zhang S,Du X,Wang R,Li Y,Liu H,Hu S,Zhou C,Zhou X,Ma L

    更新日期:2018-03-05 00:00:00

  • Resolving the Ionotropic P2X4 Receptor Mystery Points Towards a New Therapeutic Target for Cardiovascular Diseases.

    abstract::Adenosine triphosphate (ATP) is a primordial versatile autacoid that changes its role from an intracellular energy saver to a signaling molecule once released to the extracellular milieu. Extracellular ATP and its adenosine metabolite are the main activators of the P2 and P1 purinoceptor families, respectively. Mounti...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms21145005

    authors: Bragança B,Correia-de-Sá P

    更新日期:2020-07-15 00:00:00

  • Functional cross-talk between the α1- and β1-adrenergic receptors modulates the rapidly activating delayed rectifier potassium current in guinea pig ventricular myocytes.

    abstract::The rapidly activating delayed rectifier potassium current (IKr) plays a critical role in cardiac repolarization. Although IKr is known to be regulated by both α1- and β1-adrenergic receptors (ARs), the cross-talk and feedback mechanisms that dictate its response to α1- and β1-AR activation are not known. In the prese...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms150814220

    authors: Xu D,Wang S,Wu TT,Wang XY,Qian J,Guo Y

    更新日期:2014-08-15 00:00:00

  • Role of Nitric Oxide in the Cardiovascular and Renal Systems.

    abstract::The gasotransmitters are a family of gaseous signaling molecules which are produced endogenously and act at specific receptors to play imperative roles in physiologic and pathophysiologic processes. As a well-known gasotransmitter along with hydrogen sulfide and carbon monoxide, nitric oxide (NO) has earned repute as ...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms19092605

    authors: Ahmad A,Dempsey SK,Daneva Z,Azam M,Li N,Li PL,Ritter JK

    更新日期:2018-09-03 00:00:00

  • Nanosecond-Pulsed DBD Plasma-Generated Reactive Oxygen Species Trigger Immunogenic Cell Death in A549 Lung Carcinoma Cells through Intracellular Oxidative Stress.

    abstract::A novel application for non-thermal plasma is the induction of immunogenic cancer cell death for cancer immunotherapy. Cells undergoing immunogenic death emit danger signals which facilitate anti-tumor immune responses. Although pathways leading to immunogenic cell death are not fully understood; oxidative stress is c...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms18050966

    authors: Lin A,Truong B,Patel S,Kaushik N,Choi EH,Fridman G,Fridman A,Miller V

    更新日期:2017-05-03 00:00:00

  • Combined Proteomic and Metabolomic Profiling of the Arabidopsis thaliana vps29 Mutant Reveals Pleiotropic Functions of the Retromer in Seed Development.

    abstract::The retromer is a multiprotein complex conserved from yeast to humans, which is involved in intracellular protein trafficking and protein recycling. Selection of cargo proteins transported by the retromer depends on the core retromer subunit composed of the three vacuolar protein sorting (VPS) proteins, namely VPS26, ...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms20020362

    authors: Durand TC,Cueff G,Godin B,Valot B,Clément G,Gaude T,Rajjou L

    更新日期:2019-01-16 00:00:00

  • Deciphering the Role of Multiple Thioredoxin Fold Proteins of Leptospirillum sp. in Oxidative Stress Tolerance.

    abstract::Thioredoxin fold proteins (TFPs) form a family of diverse proteins involved in thiol/disulfide exchange in cells from all domains of life. Leptospirillum spp. are bioleaching bacteria naturally exposed to extreme conditions like acidic pH and high concentrations of metals that can contribute to the generation of react...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms21051880

    authors: González D,Álamos P,Rivero M,Orellana O,Norambuena J,Chávez R,Levicán G

    更新日期:2020-03-10 00:00:00

  • The Emerging Relevance of AIM2 in Liver Disease.

    abstract::Absent in melanoma 2 (AIM2) is a cytosolic receptor that recognizes double-stranded DNA (dsDNA) and triggers the activation of the inflammasome cascade. Activation of the inflammasome results in the maturation of inflammatory cytokines, such as interleukin (IL)-1 β and IL-18, and a form of cell death known as pyroptos...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms21186535

    authors: Lozano-Ruiz B,González-Navajas JM

    更新日期:2020-09-07 00:00:00

  • Cloning and Functional Characterization of Dihydroflavonol 4-Reductase Gene Involved in Anthocyanidin Biosynthesis of Grape Hyacinth.

    abstract::Grape hyacinth (Muscari spp.) is a popular ornamental plant with bulbous flowers noted for their rich blue color. Muscari species have been thought to accumulate delphinidin and cyanidin rather than pelargonidin-type anthocyanins because their dihydroflavonol 4-reductase (DFR) does not efficiently reduce dihydrokaempf...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms20194743

    authors: Liu H,Lou Q,Ma J,Su B,Gao Z,Liu Y

    更新日期:2019-09-24 00:00:00

  • Principal component analysis of HPLC retention data and molecular modeling structural parameters of cardiovascular system drugs in view of their pharmacological activity.

    abstract::Evaluation of relationships between molecular modeling structural parameters and high-performance liquid chromatography (HPLC) retention data of 11 cardiovascular system drugs by principal component analysis (PCA) in relation to their pharmacological activity was performed. The six retention data parameters were deter...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms11072681

    authors: Stasiak J,Koba M,Bober L,Baczek T

    更新日期:2010-07-09 00:00:00

  • Do Atypical Antipsychotics Have Antisuicidal Effects? A Hypothesis-Generating Overview.

    abstract::Modern antipsychotic drugs are employed increasingly in the treatment of mood disorders as well as psychoses, stimulating interest in their possible contributions to altering suicidal risk. Clozapine remains the only treatment with an FDA-recognized indication for reducing suicidal risk (in schizophrenia). We carried ...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms17101700

    authors: Pompili M,Baldessarini RJ,Forte A,Erbuto D,Serafini G,Fiorillo A,Amore M,Girardi P

    更新日期:2016-10-11 00:00:00

  • The controversial role of retinoic acid in fibrotic diseases: analysis of involved signaling pathways.

    abstract::Fibrotic diseases, such as liver, pulmonary and renal fibrosis, are common end-stage conditions and represent a major global health problem. Furthermore, effective therapeutic measures are presently unavailable. Extracellular matrix accumulation is the most prominent characteristic in the pathogenesis of fibrotic dise...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms14010226

    authors: Zhou TB,Drummen GP,Qin YH

    更新日期:2012-12-21 00:00:00

  • Joint Effects of PON1 Polymorphisms and Vegetable Intake on Ischemic Stroke: A Family-Based Case Control Study.

    abstract::Paraoxonase 1 gene (PON1) polymorphisms and dietary vegetable and fruit intake are both established determinants of ischemic stroke (IS). However, little is known about whether these factors jointly influence the risk of IS. We analyzed the main effects of PON1, as well as the interactions between PON1 and dietary veg...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms18122652

    authors: Juan J,Jiang X,Tang X,Wu Y,Sun K,Xiang X,Tian Y,Wu T,Sun Q,Kraft P,Hu Y

    更新日期:2017-12-07 00:00:00

  • Osteoporosis in Skin Diseases.

    abstract::Osteoporosis (OP) is defined as a generalized skeletal disease characterized by low bone mass and an alteration of the microarchitecture that lead to an increase in bone fragility and, therefore, an increased risk of fractures. It must be considered today as a true public health problem and the most widespread metabol...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms21134749

    authors: Sirufo MM,De Pietro F,Bassino EM,Ginaldi L,De Martinis M

    更新日期:2020-07-03 00:00:00

  • Prevalence of Quinolone Resistance of Extended-Spectrum β-Lactamase-Producing Escherichia coli with ST131-fimH30 in a City Hospital in Hyogo, Japan.

    abstract::Extended-spectrum β-lactamase (ESBL)-producing Escherichia coli isolates are known to tolerate superior quinolone antimicrobials compared with other antibacterial agents. Among the clones belonging to sequence type (ST) 131 by multilocus sequence typing, the involvement of the H30-Rx subclone has been reported worldwi...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms20205162

    authors: Teramae M,Osawa K,Shigemura K,Kitagawa K,Shirakawa T,Fujisawa M,Miyara T

    更新日期:2019-10-18 00:00:00

  • Regeneration of Pulmonary Tissue in a Calf Model of Fibrinonecrotic Bronchopneumonia Induced by Experimental Infection with Chlamydia Psittaci.

    abstract::Pneumonia is a cause of high morbidity and mortality in humans. Animal models are indispensable to investigate the complex cellular interactions during lung injury and repair in vivo. The time sequence of lesion development and regeneration is described after endobronchial inoculation of calves with Chlamydia psittaci...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms21082817

    authors: Liebler-Tenorio EM,Lambertz J,Ostermann C,Sachse K,Reinhold P

    更新日期:2020-04-17 00:00:00

  • Exploring the Potential of Spherical Harmonics and PCVM for Compounds Activity Prediction.

    abstract::Biologically active chemical compounds may provide remedies for several diseases. Meanwhile, Machine Learning techniques applied to Drug Discovery, which are cheaper and faster than wet-lab experiments, have the capability to more effectively identify molecules with the expected pharmacological activity. Therefore, it...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms20092175

    authors: Wiercioch M

    更新日期:2019-05-02 00:00:00

  • Current models of mammalian target of rapamycin complex 1 (mTORC1) activation by growth factors and amino acids.

    abstract::Mammalian target of rapamycin (mTOR), which is now referred to as mechanistic target of rapamycin, integrates many signals, including those from growth factors, energy status, stress, and amino acids, to regulate cell growth and proliferation, protein synthesis, protein degradation, and other physiological and biochem...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms151120753

    authors: Zheng X,Liang Y,He Q,Yao R,Bao W,Bao L,Wang Y,Wang Z

    更新日期:2014-11-13 00:00:00

  • Diverging Concepts and Novel Perspectives in Regenerative Medicine.

    abstract::Regenerative medicine has rapidly evolved, due to progress in cell and molecular biology allowing the isolation, characterization, expansion, and engineering of cells as therapeutic tools. Despite past limited success in the clinical translation of several promising preclinical results, this novel field is now enterin...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms18051021

    authors: Muraca M,Piccoli M,Franzin C,Tolomeo AM,Jurga M,Pozzobon M,Perilongo G

    更新日期:2017-05-09 00:00:00

  • Calcium ions regulate K⁺ uptake into brain mitochondria: the evidence for a novel potassium channel.

    abstract::The mitochondrial response to changes of cytosolic calcium concentration has a strong impact on neuronal cell metabolism and viability. We observed that Ca(2+) additions to isolated rat brain mitochondria induced in potassium ion containing media a mitochondrial membrane potential depolarization and an accompanying in...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms10031104

    authors: Skalska J,Bednarczyk P,Piwońska M,Kulawiak B,Wilczynski G,Dołowy K,Kudin AP,Kunz WS,Szewczyk A

    更新日期:2009-03-01 00:00:00

  • The Prediction of Gestational Hypertension, Preeclampsia and Fetal Growth Restriction via the First Trimester Screening of Plasma Exosomal C19MC microRNAs.

    abstract::The aim of the study was to verify if quantification of placental specific C19MC microRNAs in plasma exosomes would be able to differentiate during the early stages of gestation between patients subsequently developing pregnancy-related complications and women with the normal course of gestation and if this differenti...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms20122972

    authors: Hromadnikova I,Dvorakova L,Kotlabova K,Krofta L

    更新日期:2019-06-18 00:00:00

  • Functional and Biochemical Characterization of Three Recombinant Human Glucose-6-Phosphate Dehydrogenase Mutants: Zacatecas, Vanua-Lava and Viangchan.

    abstract::Glucose-6-phosphate dehydrogenase (G6PD) deficiency in humans causes severe disease, varying from mostly asymptomatic individuals to patients showing neonatal jaundice, acute hemolysis episodes or chronic nonspherocytic hemolytic anemia. In order to understand the effect of the mutations in G6PD gene function and its ...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章

    doi:10.3390/ijms17050787

    authors: Gómez-Manzo S,Marcial-Quino J,Vanoye-Carlo A,Serrano-Posada H,González-Valdez A,Martínez-Rosas V,Hernández-Ochoa B,Sierra-Palacios E,Castillo-Rodríguez RA,Cuevas-Cruz M,Rodríguez-Bustamante E,Arreguin-Espinosa R

    更新日期:2016-05-21 00:00:00

  • Translational Control in p53 Expression: The Role of 5'-Terminal Region of p53 mRNA.

    abstract::In this review, the latest research concerning the structure and function of the 5'-terminal region of p53 mRNA was discussed. Special attention was focused on defined structural motifs which are present in this region, as well as their conservation and plausible functional role in translation. It is known that the le...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms20215382

    authors: Swiatkowska A,Dutkiewicz M,Zydowicz-Machtel P,Szpotkowska J,Janecki DM,Ciesiołka J

    更新日期:2019-10-29 00:00:00

  • Heat Shock Proteins: Dynamic Biomolecules to Counter Plant Biotic and Abiotic Stresses.

    abstract::Due to the present scenario of climate change, plants have to evolve strategies to survive and perform under a plethora of biotic and abiotic stresses, which restrict plant productivity. Maintenance of plant protein functional conformation and preventing non-native proteins from aggregation, which leads to metabolic d...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms20215321

    authors: Ul Haq S,Khan A,Ali M,Khattak AM,Gai WX,Zhang HX,Wei AM,Gong ZH

    更新日期:2019-10-25 00:00:00

  • Immunogenomic Classification of Colorectal Cancer and Therapeutic Implications.

    abstract::The immune system has a substantial effect on colorectal cancer (CRC) progression. Additionally, the response to immunotherapeutics and conventional treatment options (e.g., chemotherapy, radiotherapy and targeted therapies) is influenced by the immune system. The molecular characterization of colorectal cancer (CRC) ...

    journal_title:International journal of molecular sciences

    pub_type: 杂志文章,评审

    doi:10.3390/ijms18102229

    authors: Roelands J,Kuppen PJK,Vermeulen L,Maccalli C,Decock J,Wang E,Marincola FM,Bedognetti D,Hendrickx W

    更新日期:2017-10-24 00:00:00