Genetic analysis of signal peptides in amphibian antimicrobial secretions.

Abstract:

:Amphibian secretion is an important source of bioactive molecules that naturally protect the skin against noxious microorganisms. Collectively called antimicrobial peptides (AMPs), these molecules have a wide spectrum of action, targeting viruses, bacteria and fungi. Like many membrane and secreted proteins, AMPs have cleavable signal sequences that mediate and translocate the nascent polypeptide chains into the endoplasmic reticulum. Although it is accepted that the signal peptides (SPs) are simple and interchangeable, there is neither sequence nor structure that is conserved among all gene families. They derived from a common ancestor but developed different traits as they adapt to distinct environmental pressures. The aim of this study was to provide anoverview of the diversity of SPs of the frog, taking into account reported cDNA sequences and the evolutionary relationship among them. We analysed more than 2000 records that reported the relative abundance, diversity and evolutionary divergence based on the peptide signals of frog AMPs. We conclude that the physical properties of the sequence are more important than the specific peptidesin AMP SPs. Since there is significant overlapping among related genera, differences in secretion from different peptide types should be regulated by additional levels, such as posttranscriptional modifications or 5-UTR sequences.

journal_name

J Genet

journal_title

Journal of genetics

authors

Pérez LO,Cancelarich NL,Aguilar S,Basso NG,Marani MM

subject

Has Abstract

pub_date

2018-12-01 00:00:00

pages

1205-1212

issue

5

eissn

0022-1333

issn

0973-7731

journal_volume

97

pub_type

杂志文章
  • Case report of newborn with de novo partial trisomy 2q31.2-37.3 and monosomy 9p24.3.

    abstract::We describe a newborn female with a de novo duplication of chromosomes 2q31.2 and 2q37.3, and a de novo monosomy 9p24.3. The clinical findings of this patient include congenital heart defects, dysmorphic facial features, hypotonia, feeding difficulties and microcephaly. Ultrasonographic prenatal findings were negative...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Colangelo M,Alfonsi M,Palka C,Zio EZ,Renzo SD,Guanciali-Franchi P,Palka G

    更新日期:2018-03-01 00:00:00

  • Analysis of embryo, cytoplasmic and maternal genetic correlations for seven essential amino acids in rapeseed meal (Brassica napus L.).

    abstract::Genetic correlations of nutrient quality traits including lysine, methionine, leucine, isoleucine, phenylalanine, valine and threonine contents in rapeseed meal were analysed by the genetic model for quantitative traits of diploid plants using a diallel design with nine parents of Brassica napus L. These results indic...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-011-0040-7

    authors: Chen GL,Wu JG,Variath MT,Yang ZW,Shi CH

    更新日期:2011-04-01 00:00:00

  • Neuro-fuzzy model of homocysteine metabolism.

    abstract::In view of well-documented association of hyperhomocysteinaemia with a wide spectrum of diseases and higher incidence of vitamin deficiencies in Indians, we proposed a mathematical model to forecast the role of demographic and genetic variables in influencing homocysteinemetabolism and investigated the influence of li...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-017-0856-x

    authors: Naushad SM,Rama Devi AR,Nivetha S,Lakshmitha G,Stanley AB,Hussain T,Kutala VK

    更新日期:2017-12-01 00:00:00

  • The placental gateway of maternal transgenerational epigenetic inheritance.

    abstract::While much of our understanding of genetic inheritance is based on the genome of the organism, it is becoming clear that there is an ample amount of epigenetic inheritance, which though reversible, escapes erasing process during gametogenesis and goes on to the next generation. Several examples of transgenerational in...

    journal_title:Journal of genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s12041-017-0788-5

    authors: Sailasree SP,Srivastava S,Mishra RK

    更新日期:2017-07-01 00:00:00

  • Characterization of bZIP transcription factors from Dimocarpus longan Lour. and analysis of their tissue-specific expression patterns and response to heat stress.

    abstract::Members of the bZIP transcription factor family play crucial roles in the regulation of plant development, biosynthesis of secondary metabolites, and response to abiotic and biotic stresses. To date, multiple bZIPs have been identified and investigated in numerous plant species. However, few studies have characterized...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Zheng W,Xie T,Yu X,Chen N,Zhang Z

    更新日期:2020-01-01 00:00:00

  • Novel mutation of type-1 insulin-like growth factor receptor (IGF-1R) gene in a severe short stature pedigree identified by targeted next-generation sequencing.

    abstract::Insulin-like growth factor receptor (IGF-1R) deficiency is a rare form of short stature, and is difficult to clinically diagnose. Targeted next-generation sequencing (NGS) allows for the rapid and inexpensive assessment of short stature. We identified mutations in the pedigree of a Chinese boy with severe short statur...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Yang Y,Huang H,Chen K,Yang L,Xie LL,Xiong T,Wu X

    更新日期:2019-03-01 00:00:00

  • Association between genetic polymorphisms of long noncoding RNA H19 and cancer risk: a meta-analysis.

    abstract::Long noncoding RNA (lncRNA) H19, a well-known oncogenic lncRNA, is overexpressed in various cancers. Several studies have investigated the association between polymorphisms in lncRNA H19 and the risk of various cancer types; however, the findings were inconsistent. In this study, we performed a meta-analysis to identi...

    journal_title:Journal of genetics

    pub_type: 杂志文章,meta分析,评审

    doi:

    authors: Hashemi M,Moazeni-Roodi A,Sarabandi S,Karami S,Ghavami S

    更新日期:2019-09-01 00:00:00

  • Meiotic behaviour of tetraploid wheats (Triticum turgidum L.) and their synthetic hexaploid wheat derivates influenced by meiotic restitution and heat stress.

    abstract::Meiotic restitution is considered to be a common mechanism of polyploidization in plants and hence is one of the most important processes in plant speciation. Meiotic behaviour of plant chromosomes is influenced by both genetic and environmental factors. In this study, the meiotic behaviour of cereal crops was investi...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-010-0058-2

    authors: Rezaei M,Arzani A,Sayed-Tabatabaei BE

    更新日期:2010-12-01 00:00:00

  • J. B. S. Haldane and the origin of life.

    abstract::In 1929 the British biologist John Burdon Sanderson Haldane published a hypothesis on the origin of life on earth, which was one of the most emblematic of the interwar period. It was a scenario describing the progressive evolution of matter on the primitive earth and the emergence of life. Firstly, this paper presents...

    journal_title:Journal of genetics

    pub_type: 传,历史文章,杂志文章

    doi:10.1007/s12041-017-0831-6

    authors: Tirard S

    更新日期:2017-11-01 00:00:00

  • Cloning, characterization and promoter analysis of common carp hairy/Enhancer-of-split-related gene, her6.

    abstract::Some members of hairy/Enhancer-of-split-related gene (HES) family have important effects on axial mesoderm segmentation and the establishment and maintenance of the somite fringe. In fishes, the her6 gene, a member of the HES family, is the homologue of hes1 in mammals and chicken. In this study, the her6 gene and its...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/BF02935327

    authors: Liu J,Sun YH,Wang N,Wang YP,Zhu ZY

    更新日期:2006-12-01 00:00:00

  • Three novel and two known androgen receptor gene mutations associated with androgen insensitivity syndrome in sex-reversed XY female patients.

    abstract::Molecular characterization of 23 cytogenetically confirmed XY females was attempted by screening coding regions of SRY and androgen receptor (AR) genes. Five of the index cases showed sequence variations in various exons of the AR gene: a deletion (n.1911delG) and substitutions n.1761G>A and n.1317C>T in exon 1; n.351...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-016-0716-0

    authors: Saranya B,Bhavani G,Arumugam B,Jayashankar M,Santhiya ST

    更新日期:2016-12-01 00:00:00

  • Fitness differences due to allelic variation at Esterase-4 locus in Drosophila ananassae.

    abstract::Esterases are known to play essential role inmetabolism, reproductive physiology and behaviour of Drosophila. Esterases are highly polymorphic enzymes in Drosophila, but the polymorphism of these enzymes is not well studied in Drosophila ananassae. Recent studies on esterase polymorphism in D. ananassae revealed that ...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-017-0814-7

    authors: Krishnamoorti K,Singh AK

    更新日期:2017-09-01 00:00:00

  • Phenotypic effects of genetic variability in human clock genes on circadian and sleep parameters.

    abstract::Circadian rhythms and sleep are two separate but intimately related processes. Circadian rhythms are generated through the precisely controlled, cyclic expression of a number of genes designated clock genes. Genetic variability in these genes has been associated with a number of phenotypic differences in circadian as ...

    journal_title:Journal of genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s12041-008-0074-7

    authors: von Schantz M

    更新日期:2008-12-01 00:00:00

  • Mitochondrial DNA sequence variation in Drosophilid species (Diptera: Drosophilidae) along altitudinal gradient from Central Himalayan region of India.

    abstract::Central Himalayan region of India encompasses varied ecological habitats ranging from near tropics to the mid-elevation forests dominated by cool-temperate taxa. In past, we have reported several new records and novel species from Uttarakhand state of India. Here, we assessed genetic variations in three mitochondrial ...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-016-0646-x

    authors: Sarswat M,Dewan S,Fartyal RS

    更新日期:2016-06-01 00:00:00

  • Identification and introgression of QTLs implicated in resistance to sorghum downy mildew (Peronosclerospora sorghi (Weston and Uppal) C. G. Shaw) in maize through marker-assisted selection.

    abstract::Sorghum downy mildew caused by Peronosclerospora sorghi is a major disease of maize and resistance is under the control of polygenes which necessitated identification of quantitative-trait loci (QTLs) for initiating marker-assisted introgression of resistant QTLs in elite susceptible inbred lines. In the present study...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-015-0590-1

    authors: Lohithaswa HC,Jyothi K,Sunil Kumar KR,Puttaramanaik,Hittalmani S

    更新日期:2015-12-01 00:00:00

  • Detection of QTL for panicle architecture in F2 population of rice.

    abstract::Panicle traits are the most important agronomic characters which directly relate to yield in rice. Panicle length (PL) being one of the major components of rice panicle structure is controlled by quantitative trait loci (QTLs). In our research, conducted at Research Farm of SKUAST-J, crosses of parental lines K343 and...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Bhat R,Singh AK,Salgotra RK,Sharma M,Mushtaq M,Bagati S,Hangloo S,Singh A

    更新日期:2019-06-01 00:00:00

  • Association of IL-10 gene (-1082A>G, -819C>T and -592C>A) polymorphism and its serum level with metabolic syndrome of north Indian subjects.

    abstract::Metabolic syndrome (MetS) is an inflammatory disorder, in which various cytokines play important role in tilting balance towards disease state. Interleukin-10 (IL-10) is an important antiinflammatory cytokine, but its genetic polymorphisms and serum levels in Indian MetS subjects are unknown. Three IL-10 gene polymorp...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-016-0738-7

    authors: Madeshiya AK,Singh S,Dwivedi S,Konwar R,Natu SM,Ghatak A

    更新日期:2017-03-01 00:00:00

  • Genetic dissection of yield associated traits in a cross between cowpea and yard-long bean (Vigna unguiculata (L.) Walp.) based on DArT markers.

    abstract::Both cowpea and yard-long bean belong to Vigna unguiculata ssp. unguiculata but have diverged through human induced evolution in sub-Saharan Africa and Asia, respectively. To map the quantitative trait loci (QTLs) for yield associated traits and derive new lines that may combine the attributes of both types, we develo...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Garcia-Oliveira AL,Zana Zate Z,Olasanmi B,Boukar O,Gedil M,Fatokun C

    更新日期:2020-01-01 00:00:00

  • Physicochemical evolution and positive selection of the gymnosperm matK proteins.

    abstract::It is not clear whether matK evolves under Darwinian selection. In this study, the gymnosperm Taxaceae, Cephalotaxaceae and Pinaceae were used to illustrate the physicochemical evolution, molecular adaptation and evolutionary dynamics of gene divergence in matKs. matK sequences were amplified from 27 Taxaceae and 12 C...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-010-0014-1

    authors: Hao da C,Mu J,Chen SL,Xiao PG

    更新日期:2010-04-01 00:00:00

  • Genetic diversity studies of Kherigarh cattle based on microsatellite markers.

    abstract::We report a genetic diversity study of Kherigarh cattle, a utility draught-purpose breed of India, currently declining at a startling rate, by use of microsatellite markers recommended by the Food and Agriculture Organization. Microsatellite genotypes were derived, and allelic and genotypic frequencies, heterozygositi...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/BF02729017

    authors: Pandey AK,Sharma R,Singh Y,Prakash BB,Ahlawat SP

    更新日期:2006-08-01 00:00:00

  • Characterization and tissue distribution of Lhx9 and Lhx9α in Chinese giant salamander Andrias davidianus.

    abstract::Lhx9 is an LIM (named for the first three proteins in which the domain was found, Lin-11, Isl1 and Mec-3) homeodomain protein involved in development and differentiation of the gonad. In this study, we isolated the full-length Lhx9 and Lhx9α from Andrias davidianus, detected the tissue distribution and analysed the me...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-016-0685-3

    authors: Hu Q,Tian H,Meng Y,Xiao H

    更新日期:2016-09-01 00:00:00

  • Identification of QTLs in oil palm (Elaeis guineensis Jacq.) using SSR markers through association mapping.

    abstract::Oil palm (Elaeis guineensis Jacq.) is a perennial vegetable and a high oil-yielding crop (4-6 t/ha). There is a large scope for increasing the oil yield by selecting elite planting material for breeding programme in germplasm evaluation, characterization and utilization. In the present study, a diverse range of 150 oi...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Bhagya HP,Kalyana Babu B,Gangadharappa PM,Naika MBN,Satish D,Mathur RK

    更新日期:2020-01-01 00:00:00

  • Matrix metalloproteinase gene polymorphisms in chronic periodontitis: a case-control study in the Indian population.

    abstract::Chronic periodontitis (CP) is the common form of inflammatory oral disease. Matrix metalloproteinases (MMPs) play a pivotal role in the progression of CP by degrading gingival tissue and its remodelling. Here, we conducted a case-control study to investigate a possible association of single-nucleotide polymorphism of ...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Majumder P,Ghosh S,Dey SK

    更新日期:2019-03-01 00:00:00

  • Study of the association of forkhead box P3 (FOXP3) gene polymorphisms with unexplained recurrent spontaneous abortions in Indian population.

    abstract::Recurrent spontaneous abortions (RSA) is defined as three or more consecutive pregnancy losses before 20 weeks of gestation. Various causes of RSA have been identified, still 50% cases remain unexplained after evaluation. One of the causes of unexplained recurrent spontaneous abortions (URSA) is supposed to be the dis...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Mishra S,Srivastava A,Mandal K,Phadke SR

    更新日期:2018-06-01 00:00:00

  • Novel alternatively spliced isoforms of MEF2A and their mRNA expression patterns in pigs.

    abstract::The present study aimed to identify the alternatively spliced isoforms of pig MEF2A gene and to determine theirmRNA expression patterns. Four alternatively spliced isoforms of pig MEF2A gene (i.e. MEF2A1, MEF2A2, MEF2A3 and MEF2A4) were cloned according to the results of transcriptome sequencing. The fifth to eighth e...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Guo XH,Zhang Q,Li M,Gao PF,Cao GQ,Cheng ZM,Zhang NF,Yu Le B,Liu JF,Liu XJ,Li BG

    更新日期:2018-09-01 00:00:00

  • Drosophila simulans Lethal hybrid rescue mutation (Lhr) rescues inviable hybrids by restoring X chromosomal dosage compensation and causes fluctuating asymmetry of development.

    abstract::The Drosophila simulans Lhr rescues lethal hybrids from the cross of D. melanogaster and D. simulans. We describe here, the phenotypes of Lhr dependent rescue hybrids and demonstrate the effects of Lhr on functional morphology of the salivary chromosomes in the hybrids. Our results reveal that the phenotypes of the 'L...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-007-0028-5

    authors: Chatterjee RN,Chatterjee P,Pal A,Pal-Bhadra M

    更新日期:2007-12-01 00:00:00

  • Eight paths of ERK1/2 signalling pathway regulating hepatocyte proliferation in rat liver regeneration.

    abstract::Although it is known that hormones, growth factors and integrin promote hepatocyte proliferation in liver regeneration (LR) through ERK1/2 signalling pathway, reports about regulating processes of its intracellular paths in hepatocytes of LR are limited. This study aims at exploring which paths of ERK1/2 signalling pa...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:

    authors: Li JW,Wang GP,Fan JY,Chang CF,Xu CS

    更新日期:2011-12-01 00:00:00

  • Accelerated molecular evolution of insect orthologues of ERG28/C14orf1: a link with ecdysteroid metabolism?

    abstract::We have analysed the evolution of ERG28/C14orf1, a gene coding for a protein involved in sterol biosynthesis. While primary sequence of the protein is well conserved in all organisms able to synthesize sterols de novo, strong divergence is noticed in insects, which are cholesterol auxotrophs. In spite of this virtual ...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/BF02811414

    authors: Veitia RA,Hurst LD

    更新日期:2001-04-01 00:00:00

  • Multidimensional analysis of Drosophila wing variation in Evolution Canyon.

    abstract::Environmental stress has been suggested to be a major evolutionary force, both through inducing strong selection and because of its direct impact on developmental buffering processes that alter the evolvability of organisms. In particular, temperature has attracted much attention because of its importance as an ecolog...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-008-0063-x

    authors: Debat V,Cornette R,Korol AB,Nevo E,Soulet D,David JR

    更新日期:2008-12-01 00:00:00

  • Variants in the interleukin-1 alpha and beta genes, and the risk for periodontal disease in dogs.

    abstract::Elevated levels of interleukin-1 (IL-1) have been shown to amplify the inflammatory response against periodontopathogenic bacteria.In humans,polymorphisms in the IL1A and IL1B genes are the most well-studied genetic polymorphisms associated with periodontal disease (PD). In contrast to human, there is a lack of knowle...

    journal_title:Journal of genetics

    pub_type: 杂志文章

    doi:10.1007/s12041-015-0576-z

    authors: Albuquerque C,Morinha F,Magalhães J,Requicha J,Dias I,Guedes-Pinto H,Bastos E,Viegas C

    更新日期:2015-12-01 00:00:00