Structure of carboxymyoglobin in crystals and in solution.

Abstract:

:The configuration of the heme-carbonyl group upon binding of carbon monoxide to sperm whale myoglobin (Mb) in crystals is evaluated on the basis of infrared spectroscopic methods. Multiplets of the totally symmetric C-O stretching mode are observed for the heme-bound ligand near 1933, 1944, and 1967 cm-1, corresponding to three different heme-carbonyl conformers. Variations in the relative proportions of these conformers can be induced by incorporation of small fractions of metMb or deoxyMb into MbCO crystals. The configuration of the iron-carbonyl with respect to the immediate coordination environment of the heme iron is assigned for each v(CO) stretching frequency on the basis of a detailed comparison of the three-dimensional structures of the heme environments of MbCO, metMb, and deoxyMb defined by crystallographic methods. The structures of the three heme-carbonyl conformers account for the v(CO) infrared absorption bands that can be observed for MbCO in solution.

authors

Makinen MW,Houtchens RA,Caughey WS

doi

10.1073/pnas.76.12.6042

subject

Has Abstract

pub_date

1979-12-01 00:00:00

pages

6042-6

issue

12

eissn

0027-8424

issn

1091-6490

journal_volume

76

pub_type

杂志文章
  • Wake-sleep cycles are severely disrupted by diseases affecting cytoplasmic homeostasis.

    abstract::The circadian clock is based on a transcriptional feedback loop with an essential time delay before feedback inhibition. Previous work has shown that PERIOD (PER) proteins generate circadian time cues through rhythmic nuclear accumulation of the inhibitor complex and subsequent interaction with the activator complex i...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2003524117

    authors: Beesley S,Kim DW,D'Alessandro M,Jin Y,Lee K,Joo H,Young Y,Tomko RJ Jr,Faulkner J,Gamsby J,Kim JK,Lee C

    更新日期:2020-11-10 00:00:00

  • Exhaled methyl nitrate as a noninvasive marker of hyperglycemia in type 1 diabetes.

    abstract::Recent technical advances allow detection of several hundred volatile organic compounds (VOCs) in human exhaled air, many of which reflect unidentified endogenous pathways. Our group has previously estimated plasma glucose levels in healthy adults during a standard oral glucose tolerance test via exhaled VOC analysis....

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0706533104

    authors: Novak BJ,Blake DR,Meinardi S,Rowland FS,Pontello A,Cooper DM,Galassetti PR

    更新日期:2007-10-02 00:00:00

  • DNA sequence of the lactose operon: the lacA gene and the transcriptional termination region.

    abstract::The lac operon of Escherichia coli spans approximately 5300 base pairs and includes the lacZ, lacY, and lacA genes in addition to the operator, promoter, and transcription termination regions. We report here the sequence of the lacA gene and the region distal to it, confirming the sequence of thiogalactoside transacet...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.82.19.6414

    authors: Hediger MA,Johnson DF,Nierlich DP,Zabin I

    更新日期:1985-10-01 00:00:00

  • Hollow core of Alzheimer's Abeta42 amyloid observed by cryoEM is relevant at physiological pH.

    abstract::Recent cryoEM density maps of Abeta(42) fibrils obtained at low pH revealed two protofilaments winding around a hollow core raising the question if such tubular structures also exist at physiological pH. Based on the cryoEM measurements and on NMR data, we probe amyloid fibril organizations corresponding to the observ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1004704107

    authors: Miller Y,Ma B,Tsai CJ,Nussinov R

    更新日期:2010-08-10 00:00:00

  • Left-handed Z-DNA and in vivo supercoil density in the Escherichia coli chromosome.

    abstract::A system for studying Z-DNA formation in the Escherichia coli chromosome was developed. Prior investigations in recombinant plasmids showed that alternating (Pur-Pyr) sequences can adopt a left-handed Z-DNA conformation both in vitro and in vivo. We constructed mobile, transposon-based cassettes carrying cloned (Pur-P...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.91.21.9980

    authors: Lukomski S,Wells RD

    更新日期:1994-10-11 00:00:00

  • At least six forms of extremely homologous cytochromes P-450 in rat liver are encoded at two closely linked genetic loci.

    abstract::A subpopulation of phenobarbital-induced cytochrome P-450 in rat liver has been shown to consist of four closely related forms of the enzyme that appeared to be strain-related. In the present study, polypeptides composing this family were analyzed by two-dimensional electrophoresis of hepatic microsomes from 64 indivi...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.80.21.6542

    authors: Rampersaud A,Walz FG Jr

    更新日期:1983-11-01 00:00:00

  • Inhibition of the K+ channel KCa3.1 ameliorates T cell-mediated colitis.

    abstract::The calcium-activated K(+) channel KCa3.1 plays an important role in T lymphocyte Ca(2+) signaling by helping to maintain a negative membrane potential, which provides an electrochemical gradient to drive Ca(2+) influx. To assess the role of KCa3.1 channels in lymphocyte activation in vivo, we studied T cell function ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0910133107

    authors: Di L,Srivastava S,Zhdanova O,Ding Y,Li Z,Wulff H,Lafaille M,Skolnik EY

    更新日期:2010-01-26 00:00:00

  • Real-time control of the energy landscape by force directs the folding of RNA molecules.

    abstract::The rugged folding-energy landscapes of RNAs often display many competing minima. How do RNAs discriminate among competing conformations in their search for the native state? By using optical tweezers, we show that the folding-energy landscape can be manipulated to control the fate of an RNA: individual RNA molecules ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0702137104

    authors: Li PT,Bustamante C,Tinoco I Jr

    更新日期:2007-04-24 00:00:00

  • Transforming growth factor-beta 1 hyperexpression in African-American hypertensives: A novel mediator of hypertension and/or target organ damage.

    abstract::Hypertension, a remediable risk factor for stroke, cardiovascular disease, and renal failure, affects 50 million individuals in the United States alone. African Americans (blacks) have a higher incidence and prevalence of hypertension and hypertension-associated target organ damage compared with Caucasian Americans (w...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.050420897

    authors: Suthanthiran M,Li B,Song JO,Ding R,Sharma VK,Schwartz JE,August P

    更新日期:2000-03-28 00:00:00

  • Duplex DNA catalyzes the chemical rearrangement of a malondialdehyde deoxyguanosine adduct.

    abstract::The primary DNA lesion induced by malondialdehyde, a byproduct of lipid peroxidation and prostaglandin synthesis, is 3-(2'-deoxy-beta-D-erythro-pentofuranosyl)-pyrimido[1, 2-a]purin-10(3H)-one (M1G). When placed opposite cytosine (underlined) at neutral pH in either the d(GGTMTCCG).d(CGGACACC) or d(ATCGCMCGGCATG). d(C...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.96.12.6615

    authors: Mao H,Schnetz-Boutaud NC,Weisenseel JP,Marnett LJ,Stone MP

    更新日期:1999-06-08 00:00:00

  • Near-unity nuclear polarization with an open-source 129Xe hyperpolarizer for NMR and MRI.

    abstract::The exquisite NMR spectral sensitivity and negligible reactivity of hyperpolarized xenon-129 (HP(129)Xe) make it attractive for a number of magnetic resonance applications; moreover, HP(129)Xe embodies an alternative to rare and nonrenewable (3)He. However, the ability to reliably and inexpensively produce large quant...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1306586110

    authors: Nikolaou P,Coffey AM,Walkup LL,Gust BM,Whiting N,Newton H,Barcus S,Muradyan I,Dabaghyan M,Moroz GD,Rosen MS,Patz S,Barlow MJ,Chekmenev EY,Goodson BM

    更新日期:2013-08-27 00:00:00

  • Indirect reciprocity with private, noisy, and incomplete information.

    abstract::Indirect reciprocity is a mechanism for cooperation based on shared moral systems and individual reputations. It assumes that members of a community routinely observe and assess each other and that they use this information to decide who is good or bad, and who deserves cooperation. When information is transmitted pub...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1810565115

    authors: Hilbe C,Schmid L,Tkadlec J,Chatterjee K,Nowak MA

    更新日期:2018-11-27 00:00:00

  • Human-modified landscapes alter mammal resource and habitat use and trophic structure.

    abstract::The broad negative consequences of habitat degradation on biodiversity have been studied, but the complex effects of natural-agricultural landscape matrices remain poorly understood. Here we used stable carbon and nitrogen isotopes to detect changes in mammal resource and habitat use and trophic structure between pres...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1904384116

    authors: Magioli M,Moreira MZ,Fonseca RCB,Ribeiro MC,Rodrigues MG,Ferraz KMPMB

    更新日期:2019-09-10 00:00:00

  • Ascorbate attenuates pulmonary emphysema by inhibiting tobacco smoke and Rtp801-triggered lung protein modification and proteolysis.

    abstract::Cigarette smoking causes emphysema, a fatal disease involving extensive structural and functional damage of the lung. Using a guinea pig model and human lung cells, we show that oxidant(s) present in tobacco smoke not only cause direct oxidative damage of lung proteins, contributing to the major share of lung injury, ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1600056113

    authors: Gupta I,Ganguly S,Rozanas CR,Stuehr DJ,Panda K

    更新日期:2016-07-19 00:00:00

  • Land-use history impacts functional diversity across multiple trophic groups.

    abstract::Land-use change is a major driver of biodiversity loss worldwide. Although biodiversity often shows a delayed response to land-use change, previous studies have typically focused on a narrow range of current landscape factors and have largely ignored the role of land-use history in shaping plant and animal communities...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1910023117

    authors: Le Provost G,Badenhausser I,Le Bagousse-Pinguet Y,Clough Y,Henckel L,Violle C,Bretagnolle V,Roncoroni M,Manning P,Gross N

    更新日期:2020-01-21 00:00:00

  • High-frequency spontaneous mutation in the bacterio-opsin gene in Halobacterium halobium is mediated by transposable elements.

    abstract::We have recently characterized a transposable element, ISH1, which inactivates the bacterio-opsin (BO) gene in two purple membrane-deficient (Pum-) mutants of Halobacterium halobium. Examination of nine additional Pum- mutants now shows that in all of these the BO gene has been inactivated by insertion of one of two t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.80.8.2201

    authors: DasSarma S,RajBhandary UL,Khorana HG

    更新日期:1983-04-01 00:00:00

  • Predicting consumer behavior with Web search.

    abstract::Recent work has demonstrated that Web search volume can "predict the present," meaning that it can be used to accurately track outcomes such as unemployment levels, auto and home sales, and disease prevalence in near real time. Here we show that what consumers are searching for online can also predict their collective...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1005962107

    authors: Goel S,Hofman JM,Lahaie S,Pennock DM,Watts DJ

    更新日期:2010-10-12 00:00:00

  • Isolation of a glycogen synthase I kinase that is independent of adenosine 3':5'-monophosphate.

    abstract::Three protein kinases (ATP:protein phosphotransferase, EC 2.7.1.37) were detected when the soluble fraction of rabbit kidney medulla was chromatographed on DEAE-cellulose with a linear NaC1 gradient. The first two kinases eluted (Peak 1 and Peak II) were cyclic-AMP-dependent, wheras Peak III was cyclic-AMP-independent...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.72.6.2197

    authors: Schlender KK,Reimann EM

    更新日期:1975-06-01 00:00:00

  • Midgestational abnormalities associated with in vitro preimplantation N-methyl-N-nitrosourea exposure with subsequent transfer to surrogate mothers.

    abstract::Mouse blastocyst functions have been shown to be disrupted by in vitro exposure to N-methyl-N-nitrosourea (MeNU). After exposure, the chemically treated blastocysts were transferred to the uteri of pseudopregnant surrogate mothers. Implantation rate and birth rate have been shown previously to decrease in a concentrat...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.82.24.8757

    authors: Bossert NL,Iannaccone PM

    更新日期:1985-12-01 00:00:00

  • Involvement of estrogen receptor beta in terminal differentiation of mammary gland epithelium.

    abstract::The mammary glands of prepubertal estrogen receptor (ER)beta-- mice are morphologically indistinguishable from those of WT littermates. It appears that, although ERbeta is expressed in the mouse mammary gland, it is not involved in ductal growth of the gland. In this study, we examined the possibility that ERbeta has ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.192561299

    authors: Förster C,Mäkela S,Wärri A,Kietz S,Becker D,Hultenby K,Warner M,Gustafsson JA

    更新日期:2002-11-26 00:00:00

  • Growth and viability of macrophages continuously stimulated to produce nitric oxide.

    abstract::Deregulated production of nitric oxide (NO) has been implicated in the development of certain human diseases, including cancer. We sought to assess the damaging potential of NO produced under long-term conditions through the development of a suitable model cell culture system. In this study, we report that when murine...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.94.22.11875

    authors: Zhuang JC,Wogan GN

    更新日期:1997-10-28 00:00:00

  • Evidence for the prepattern/cooption model of vertebrate jaw evolution.

    abstract::The appearance of jaws was a turning point in vertebrate evolution because it allowed primitive vertebrates to capture and process large, motile prey. The vertebrate jaw consists of separate dorsal and ventral skeletal elements connected by a joint. How this structure evolved from the unjointed gill bar of a jawless a...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1009304107

    authors: Cerny R,Cattell M,Sauka-Spengler T,Bronner-Fraser M,Yu F,Medeiros DM

    更新日期:2010-10-05 00:00:00

  • Frequent fusion and fission of plant mitochondria with unequal nucleoid distribution.

    abstract::The balance between mitochondrial fusion and fission influences the reticular shape of mitochondria in yeasts. Little is known about whether mitochondria fusion occurs in plants. Plant mitochondria are usually more numerous and more grain-shaped than animal mitochondria. BLAST searches of the nuclear and mitochondrial...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0401077101

    authors: Arimura S,Yamamoto J,Aida GP,Nakazono M,Tsutsumi N

    更新日期:2004-05-18 00:00:00

  • Randomly inserted and targeted Hox/reporter fusions transcriptionally silenced in Polycomb mutants.

    abstract::Polycomb-group (Pc-G) proteins ensure late maintenance of transcriptional repression outside the expression domain of target genes in flies and vertebrates. They act in complexes, presumably by modulating chromatin structure. In Drosophila, they have been found to be associated with transcriptionally inactive loci but...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2237046100

    authors: d Graaff W,Tomotsune D,Oosterveen T,Takihara Y,Koseki H,Deschamps J

    更新日期:2003-11-11 00:00:00

  • Evolutionary dynamics of olfactory receptor genes in Drosophila species.

    abstract::Olfactory receptor (OR) genes are of vital importance for animals to find food, identify mates, and avoid dangers. In mammals, the number of OR genes is large and varies extensively among different orders, whereas, in insects, the extent of interspecific variation appears to be small, although only a few species have ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0702133104

    authors: Nozawa M,Nei M

    更新日期:2007-04-24 00:00:00

  • Import of cytochrome c into mitochondria: reduction of heme, mediated by NADH and flavin nucleotides, is obligatory for its covalent linkage to apocytochrome c.

    abstract::The covalent attachment of heme to apocytochrome c, and therefore the import of cytochrome c into mitochondria, is dependent on both NADH plus a cytosolic cofactor that has been identified to be FMN or FAD. NADH in concert with flavin nucleotides mediates the reduction of heme. Heme in the reduced state is a prerequis...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.86.12.4340

    authors: Nicholson DW,Neupert W

    更新日期:1989-06-01 00:00:00

  • DNA double-strand break repair proteins are required to cap the ends of mammalian chromosomes.

    abstract::Recent findings intriguingly place DNA double-strand break repair proteins at chromosome ends in yeast, where they help maintain normal telomere length and structure. In the present study, an essential telomere function, the ability to cap and thereby protect chromosomes from end-to-end fusions, was assessed in repair...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.96.26.14899

    authors: Bailey SM,Meyne J,Chen DJ,Kurimasa A,Li GC,Lehnert BE,Goodwin EH

    更新日期:1999-12-21 00:00:00

  • Nanostructure of cellulose microfibrils in spruce wood.

    abstract::The structure of cellulose microfibrils in wood is not known in detail, despite the abundance of cellulose in woody biomass and its importance for biology, energy, and engineering. The structure of the microfibrils of spruce wood cellulose was investigated using a range of spectroscopic methods coupled to small-angle ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1108942108

    authors: Fernandes AN,Thomas LH,Altaner CM,Callow P,Forsyth VT,Apperley DC,Kennedy CJ,Jarvis MC

    更新日期:2011-11-22 00:00:00

  • Insulin stimulates a membrane-bound serine kinase that may be phosphorylated on tyrosine.

    abstract::Triton X-100-solubilized high-density microsomes from insulin-treated rat adipocytes exhibit a marked increase in serine/threonine and tyrosine kinase activities toward exogenous histone when compared to controls. The insulin-dependent activation of microsomal histone kinase activities occurs within the physiological ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.12.3972

    authors: Yu KT,Khalaf N,Czech MP

    更新日期:1987-06-01 00:00:00

  • E3 ubiquitin ligase Mule ubiquitinates Miz1 and is required for TNFalpha-induced JNK activation.

    abstract::The zinc finger transcription factor Miz1 is a negative regulator of TNFalpha-induced JNK activation and cell death through inhibition of TRAF2 K63-polyubiquitination in a transcription-independent manner. Upon TNFalpha stimulation, Miz1 undergoes K48-linked polyubiquitination and proteasomal degradation, thereby reli...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0913690107

    authors: Yang Y,Do H,Tian X,Zhang C,Liu X,Dada LA,Sznajder JI,Liu J

    更新日期:2010-07-27 00:00:00