Population genetic structure of Patagonian toothfish (Dissostichus eleginoides) in the Southeast Pacific and Southwest Atlantic Ocean.

Abstract:

:Previous studies of population genetic structure in Dissostichus eleginoides have shown that oceanographic and geographic discontinuities drive in this species population differentiation. Studies have focused on the genetics of D. eleginoides in the Southern Ocean; however, there is little knowledge of their genetic variation along the South American continental shelf. In this study, we used a panel of six microsatellites to test whether D. eleginoides shows population genetic structuring in this region. We hypothesized that this species would show zero or very limited genetic structuring due to the habitat continuity along the South American shelf from Peru in the Pacific Ocean to the Falkland Islands in the Atlantic Ocean. We used Bayesian and traditional analyses to evaluate population genetic structure, and we estimated the number of putative migrants and effective population size. Consistent with our predictions, our results showed no significant genetic structuring among populations of the South American continental shelf but supported two significant and well-defined genetic clusters of D. eleginoides between regions (South American continental shelf and South Georgia clusters). Genetic connectivity between these two clusters was 11.3% of putative migrants from the South American cluster to the South Georgia Island and 0.7% in the opposite direction. Effective population size was higher in locations from the South American continental shelf as compared with the South Georgia Island. Overall, our results support that the continuity of the deep-sea habitat along the continental shelf and the biological features of the study species are plausible drivers of intraspecific population genetic structuring across the distribution of D. eleginoides on the South American continental shelf.

journal_name

PeerJ

journal_title

PeerJ

authors

Canales-Aguirre CB,Ferrada-Fuentes S,Galleguillos R,Oyarzun FX,Hernández CE

doi

10.7717/peerj.4173

subject

Has Abstract

pub_date

2018-01-16 00:00:00

pages

e4173

issn

2167-8359

pii

4173

journal_volume

6

pub_type

杂志文章

相关文献

PeerJ文献大全
  • Beetles in bamboo forests: community structure in a heterogeneous landscape of southwestern Amazonia.

    abstract::Amazonian bamboo forests dominated by large woody bamboo plants in the genus Guadua cover approximately 180,000 km2 and represent a key resource for many organisms. In southwestern Amazonia, native bamboo forests differ in structure, biodiversity, and growth dynamics from other forest types in the region. However, wit...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5153

    authors: Jacobs JM,von May R,Kavanaugh DH,Connor EF

    更新日期:2018-07-03 00:00:00

  • Prey type and foraging ecology of Sanderlings Calidris alba in different climate zones: are tropical areas more favourable than temperate sites?

    abstract::Sanderlings (Calidris alba) are long-distance migratory shorebirds with a non-breeding range that spans temperate and tropical coastal habitats. Breeding in the High Arctic combined with non-breeding seasons in the tropics necessitate long migrations, which are energetically demanding. On an annual basis, the higher e...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1125

    authors: Grond K,Ntiamoa-Baidu Y,Piersma T,Reneerkens J

    更新日期:2015-08-11 00:00:00

  • Herbicide injury induces DNA methylome alterations in Arabidopsis.

    abstract::The emergence of herbicide-resistant weeds is a major threat facing modern agriculture. Over 470 weedy-plant populations have developed resistance to herbicides. Traditional evolutionary mechanisms are not always sufficient to explain the rapidity with which certain weed populations adapt in response to herbicide expo...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3560

    authors: Kim G,Clarke CR,Larose H,Tran HT,Haak DC,Zhang L,Askew S,Barney J,Westwood JH

    更新日期:2017-07-20 00:00:00

  • Impact of the antidepressant citalopram on the behaviour of two different life stages of brown trout.

    abstract:Background:Over the last two decades, there has been a constant increase in prescription rates of antidepressants. In parallel, neuroactive pharmaceuticals are making their way into aquatic environments at increasing concentrations. Among the antidepressants detected in the environment citalopram, a selective serotonin...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8765

    authors: Ziegler M,Knoll S,Köhler HR,Tisler S,Huhn C,Zwiener C,Triebskorn R

    更新日期:2020-03-12 00:00:00

  • Concordance and discordance of sequence survey methods for molecular epidemiology.

    abstract::The post-genomic era is characterized by the direct acquisition and analysis of genomic data with many applications, including the enhancement of the understanding of microbial epidemiology and pathology. However, there are a number of molecular approaches to survey pathogen diversity, and the impact of these differen...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.761

    authors: Castro-Nallar E,Hasan NA,Cebula TA,Colwell RR,Robison RA,Johnson WE,Crandall KA

    更新日期:2015-02-17 00:00:00

  • Sarc-F and muscle function in community dwelling adults with aged care service needs: baseline and post-training relationship.

    abstract:Background:This study sought to better understand the psychometric properties of the SARC-F, by examining the baseline and training-related relationships between the five SARC-F items and objective measures of muscle function. Each of the five items of the SARC-F are scored from 0 to 2, with total score of four or more...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8140

    authors: Keogh JWL,Henwood T,Gardiner PA,Tuckett AG,Hetherington S,Rouse K,Swinton P

    更新日期:2019-11-27 00:00:00

  • Ichthyoplankton assemblage structure of springs in the Yangtze Estuary revealed by biological and environmental visions.

    abstract::The ichthyoplankton assemblage structure in the Yangtze Estuary was analyzed based on four springs in 1999, 2001, 2004 and 2007 in order to provide detailed characterizations of the ichthyoplankton assemblage in springs, examine the long-term dynamics of spring ichthyoplankton assemblages, and evaluate the influence o...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1186

    authors: Zhang H,Xian W,Liu S

    更新日期:2015-08-18 00:00:00

  • Maternal inheritance of F1 hybrid morphology and colony shape in the coral genus Acropora.

    abstract:Background:The coral genus Acropora contains more than 150 species with very high morphological diversity. This high diversity may have been caused by repeated hybridization via mass spawning. However, we have little information whether hybrids are formed in these corals. Identifying morphological differences between h...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6429

    authors: Fukami H,Iwao K,Kumagai NH,Morita M,Isomura N

    更新日期:2019-02-19 00:00:00

  • Correction: A microbial survey of the International Space Station (ISS).

    abstract::[This corrects the article DOI: 10.7717/peerj.4029.]. ...

    journal_title:PeerJ

    pub_type: 杂志文章,已发布勘误

    doi:10.7717/peerj.4029/correction-1

    authors: Lang JM,Coil DA,Neches RY,Brown WE,Cavalier D,Severance M,Hampton-Marcell JT,Gilbert JA,Eisen JA

    更新日期:2018-02-27 00:00:00

  • The first reported ceratopsid dinosaur from eastern North America (Owl Creek Formation, Upper Cretaceous, Mississippi, USA).

    abstract::Ceratopsids ("horned dinosaurs") are known from western North America and Asia, a distribution reflecting an inferred subaerial link between the two landmasses during the Late Cretaceous. However, this clade was previously unknown from eastern North America, presumably due to limited outcrop of the appropriate age and...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3342

    authors: Farke AA,Phillips GE

    更新日期:2017-05-23 00:00:00

  • A new species of Atrimitra Dall, 1918 (Gastropoda: Mitridae) from seamounts of the recently created Nazca-Desventuradas Marine Park, Chile.

    abstract::We describe Atrimitra isolata sp. n. (Gastropoda: Mitridae), collected on the summit of seamounts (~200 m water depth) in the vicinity of Desventuradas Islands, Chile insular territory. Additionally, we provide some insight into the habitat of this new species based on underwater imagery taken with a remotely operated...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8279

    authors: Sellanes J,Salisbury RA,Tapia JM,Asorey CM

    更新日期:2019-12-20 00:00:00

  • Integrative taxonomy of the ornamental 'peppermint' shrimp public market and population genetics of Lysmata boggessi, the most heavily traded species worldwide.

    abstract::The ornamental trade is a worldwide industry worth >15 billion USD with a problem of rampant product misidentification. Minimizing misidentification is critical in the face of overexploitation of species in the trade. We surveyed the peppermint shrimp ornamental marketplace in the southeastern USA, the most intense ma...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3786

    authors: Baeza JA,Behringer DC

    更新日期:2017-09-18 00:00:00

  • A six-microRNA signature can better predict overall survival of patients with esophagus adenocarcinoma.

    abstract:Background:The microRNAs (miRNAs) have been validated as prognostic markers in many cancers. Here, we aimed at developing a miRNA-based signature for predicting the prognosis of esophagus adenocarcinoma (EAC). Methods:The RNA-sequencing data set of EAC was downloaded from The Cancer Genome Atlas (TCGA). Eighty-four pa...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.7353

    authors: Lan T,Lu Y,Xiao Z,Xu H,He J,Hu Z,Mao W

    更新日期:2019-07-25 00:00:00

  • In silico and in vitro identification of secoisolariciresinol as a re-sensitizer of P-glycoprotein-dependent doxorubicin-resistance NCI/ADR-RES cancer cells.

    abstract::P-glycoprotein (P-gp) is one of the highly expressed cancer cell efflux transporters that cause the failure of chemotherapy. To reverse P-gp induced multidrug resistance, we employed a flaxseed-derived lignan; secoisolariciresinol (SECO) that acts as an inhibitor of breast cancer resistance protein; another efflux tra...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9163

    authors: Morsy MA,El-Sheikh AAK,Ibrahim ARN,Venugopala KN,Kandeel M

    更新日期:2020-06-10 00:00:00

  • Short-term starvation at low temperature prior to harvest does not impact the health and acute stress response of adult Atlantic salmon.

    abstract::A period of starvation is regarded as a sound practice in aquaculture prior to handling, transportation and harvest, to minimise impacts on welfare and ensure proper hygiene after harvest. However, documentation of welfare issues such as stress following starvation and handling in adult Atlantic salmon are lacking. Th...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3273

    authors: Waagbø R,Jørgensen SM,Timmerhaus G,Breck O,Olsvik PA

    更新日期:2017-04-27 00:00:00

  • Effects of graded concentrations of supplemental lead on lead concentrations in tissues of pigs and prediction equations for estimating dietary lead intake.

    abstract::The objectives of this experiment were to determine the effects of graded dietary lead (Pb) concentrations on body weight and Pb concentrations in blood, hair, soft tissues, and urine from pigs and to generate equations for estimating daily Pb intake. Sixteen barrows with initial body weight 36.3 kg (standard deviatio...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3936

    authors: Reddy KE,Park KR,Lee SD,Yoo JH,Son AR,Lee HJ

    更新日期:2017-11-01 00:00:00

  • Robust and accurate quantification of biomarkers of immune cells in lung cancer micro-environment using deep convolutional neural networks.

    abstract::Recent years have seen a growing awareness of the role the immune system plays in successful cancer treatment, especially in novel therapies like immunotherapy. The characterization of the immunological composition of tumors and their micro-environment is thus becoming a necessity. In this paper we introduce a deep le...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6335

    authors: Aprupe L,Litjens G,Brinker TJ,van der Laak J,Grabe N

    更新日期:2019-04-10 00:00:00

  • Revision of the Late Jurassic crocodyliform Alligatorellus, and evidence for allopatric speciation driving high diversity in western European atoposaurids.

    abstract::Atoposaurid crocodyliforms represent an important faunal component of Late Jurassic to Early Cretaceous Laurasian semi-aquatic to terrestrial ecosystems, with numerous spatiotemporally contemporaneous atoposaurids known from western Europe. In particular, the Late Jurassic of France and Germany records evidence for hi...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.599

    authors: Tennant JP,Mannion PD

    更新日期:2014-09-25 00:00:00

  • Evaluation of the effective dose of amygdalin for the improvement of antioxidant gene expression and suppression of oxidative damage in mice.

    abstract:Background:Little is known regarding the toxic and therapeutic doses of amygdalin. Treatment regimens and schedules can vary between humans and animal models, and there have been reports of cyanide toxicity due to amygdalin use. Objective:The aim of this study was to evaluate the effect of different doses of amygdalin...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9232

    authors: Albogami S,Hassan A,Ahmed N,Alnefaie A,Alattas A,Alquthami L,Alharbi A

    更新日期:2020-05-21 00:00:00

  • Analysis of pedestrian activity before and during COVID-19 lockdown, using webcam time-lapse from Cracow and machine learning.

    abstract::At the turn of February and March 2020, COVID-19 pandemic reached Europe. Many countries, including Poland imposed lockdown as a method of securing social distance between potentially infected. Stay-at-home orders and movement control within public space not only affected the touristm industry, but also the everyday l...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.10132

    authors: Szczepanek R

    更新日期:2020-10-05 00:00:00

  • Wing morphological responses to latitude and colonisation in a range expanding butterfly.

    abstract::Populations undergoing rapid climate-driven range expansion experience distinct selection regimes dominated both by increased dispersal at the leading edges and steep environmental gradients. Characterisation of traits associated with such expansions provides insight into the selection pressures and evolutionary const...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.10352

    authors: Taylor-Cox ED,Macgregor CJ,Corthine A,Hill JK,Hodgson JA,Saccheri IJ

    更新日期:2020-11-19 00:00:00

  • Mitochondrial complex I deficiency leads to the retardation of early embryonic development in Ndufs4 knockout mice.

    abstract:BACKGROUND:The NDUFS4 gene encodes an 18-kD subunit of mitochondria complex I, and mutations in this gene lead to the development of a severe neurodegenerative disease called Leigh syndrome (LS) in humans. To investigate the disease phenotypes and molecular mechanisms of Leigh syndrome, the Ndufs4 knockout (KO) mouse h...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3339

    authors: Wang M,Huang YP,Wu H,Song K,Wan C,Chi AN,Xiao YM,Zhao XY

    更新日期:2017-05-18 00:00:00

  • Dynamic changes in intestinal microbiota in young forest musk deer during weaning.

    abstract::Weaning is an important event for all mammals, including young forest musk deer. However, weaning stress may cause intestinal microbiota-related disorders. Therefore, high-throughput 16S rRNA gene sequencing was applied to study the dynamic changes in intestinal microbiota during pre-weaning (10 days before weaning) a...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8923

    authors: Li Y,Shi M,Zhang T,Hu X,Zhang B,Xu S,Ding J,Hu D,Liu S

    更新日期:2020-04-13 00:00:00

  • Dynamics of ammonia oxidizers and denitrifiers in response to compost addition in black soil, Northeast China.

    abstract::Organic fertilizer application could have an impact on the nitrogen cycle mediated by microorganisms in arable soils. However, the dynamics of soil ammonia oxidizers and denitrifiers in response to compost addition are less understood. In this study, we examined the effect of four compost application rates (0, 11.25, ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8844

    authors: Yang Z,Guan Y,Bello A,Wu Y,Ding J,Wang L,Ren Y,Chen G,Yang W

    更新日期:2020-04-21 00:00:00

  • Differentially expressed genes and key molecules of BRCA1/2-mutant breast cancer: evidence from bioinformatics analyses.

    abstract:Background:BRCA1 and BRCA2 genes are currently proven to be closely related to high lifetime risks of breast cancer. To date, the closely related genes to BRCA1/2 mutations in breast cancer remains to be fully elucidated. This study aims to identify the gene expression profiles and interaction networks influenced by BR...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8403

    authors: Li Y,Zhou X,Liu J,Yin Y,Yuan X,Yang R,Wang Q,Ji J,He Q

    更新日期:2020-01-21 00:00:00

  • Maternal alcohol consumption during pregnancy and child's cognitive performance at 6-8 years of age in rural Burkina Faso: an observational study.

    abstract:BACKGROUND:In Burkina Faso, it is not uncommon for mothers to drink alcohol, even during pregnancy. We aimed to study the association between maternal alcohol consumption during pregnancy and the child's cognitive performance using the Kaufman Assessment Battery for Children, 2nd edition (KABC-II) and the Children's Ca...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3507

    authors: Sanou AS,Diallo AH,Holding P,Nankabirwa V,Engebretsen IMS,Ndeezi G,Tumwine JK,Meda N,Tylleskar T,Kashala-Abotnes E

    更新日期:2017-06-30 00:00:00

  • Single mutations in the ε subunit from thermophilic Bacillus PS3 generate a high binding affinity site for ATP.

    abstract::The ε subunit from ATP synthases acts as an ATP sensor in the bacterial cell to prevent ATP hydrolysis and thus the waste of ATP under conditions of low ATP concentration. However, the ATP binding affinities from various bacterial organisms differ markedly, over several orders of magnitude. For example, the ATP syntha...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5505

    authors: Krah A,Bond PJ

    更新日期:2018-09-05 00:00:00

  • Monitoring coastal pollution associated with the largest oil refinery complex of Venezuela.

    abstract::This study evaluated pollution levels in water and sediments of Península de Paraguaná and related these levels with benthic macrofauna along a coastal area where the largest Venezuelan oil refineries have operated over the past 60 years. For this, the concentration of heavy metals, of hydrocarbon compounds and the co...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.2171

    authors: Croquer A,Bone D,Bastidas C,Ramos R,García E

    更新日期:2016-06-23 00:00:00

  • Towards a taxonomic revision of the genus Cyrtochilum (Orchidaceae) in Northwestern South America (Northern Peru, Ecuador, Colombia, Venezuela).

    abstract::This article is a presentation of taxonomic diversity of the orchid genus Cyrtochilum in Northwestern South America. The morphological characteristics of over 90 species occurring in northern Peru, Ecuador, Colombia and Venezuela are presented together with illustrations of their floral segments. Information about the...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8566

    authors: Szlachetko DL,Kolanowska M

    更新日期:2020-02-14 00:00:00

  • Artificial neural network cascade identifies multi-P450 inhibitors in natural compounds.

    abstract::Substantial evidence has shown that most exogenous substances are metabolized by multiple cytochrome P450 (P450) enzymes instead of by merely one P450 isoform. Thus, multi-P450 inhibition leads to greater drug-drug interaction risk than specific P450 inhibition. Herein, we innovatively established an artificial neural...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1524

    authors: Li Z,Li Y,Sun L,Tang Y,Liu L,Zhu W

    更新日期:2015-12-21 00:00:00