The Saccharomyces cerevisiae poly(A) binding protein Pab1 as a target for eliciting stress tolerant phenotypes.

Abstract:

:When exploited as cell factories, Saccharomyces cerevisiae cells are exposed to harsh environmental stresses impairing titer, yield and productivity of the fermentative processes. The development of robust strains therefore represents a pivotal challenge for the implementation of cost-effective bioprocesses. Altering master regulators of general cellular rewiring represents a possible strategy to evoke shaded potential that may accomplish the desirable features. The poly(A) binding protein Pab1, as stress granules component, was here selected as the target for obtaining widespread alterations in mRNA metabolism, resulting in stress tolerant phenotypes. Firstly, we demonstrated that the modulation of Pab1 levels improves robustness against different stressors. Secondly, the mutagenesis of PAB1 and the application of a specific screening protocol on acetic acid enriched medium allowed the isolation of the further ameliorated mutant pab1 A60-9. These findings pave the way for a novel approach to unlock industrially promising phenotypes through the modulation of a post-transcriptional regulatory element.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Martani F,Marano F,Bertacchi S,Porro D,Branduardi P

doi

10.1038/srep18318

subject

Has Abstract

pub_date

2015-12-14 00:00:00

pages

18318

issn

2045-2322

pii

srep18318

journal_volume

5

pub_type

杂志文章
  • Immune responses against Helicobacter pylori-specific antigens differentiate relapsing remitting from secondary progressive multiple sclerosis.

    abstract::To assess whether Helicobacter pylori (Hp) antibody (ab) reactivity against individual Hp antigens is pathogenetically relevant to multiple sclerosis (MS), we systematically investigated prevalence and clinical significance of abs against 14 immunodominant and subdominant Hp antigens by ELISA and immunoblotting in 139...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-07801-9

    authors: Efthymiou G,Dardiotis E,Liaskos C,Marou E,Tsimourtou V,Rigopoulou EI,Scheper T,Daponte A,Meyer W,Sakkas LI,Hadjigeorgiou G,Bogdanos DP

    更新日期:2017-08-11 00:00:00

  • Dynamic properties of excitons in ZnO/AlGaN/GaN hybrid nanostructures.

    abstract::Hybrid samples based on ZnO colloidal nanocrystals (NCs) deposited on AlGaN/GaN quantum well (QW) structures with different top barrier thickness d = 3, 6 and 9 nm are studied by time-resolved photoluminescence. Thermal behavior of the QW exciton lifetime in the hybrids and in the bare QW structures has been compared ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep07889

    authors: Forsberg M,Hemmingsson C,Amano H,Pozina G

    更新日期:2015-01-20 00:00:00

  • Neck-specific exercise for radiating pain and neurological deficits in chronic whiplash, a 1-year follow-up of a randomised clinical trial.

    abstract::Up to 90% of people with neurological deficits following whiplash injury report chronic symptoms. A recent unique study of neck-specific exercise showed positive results (post-intervention at 12 weeks), regarding arm pain and neurological deficits in people with chronic whiplash associated disorders (WAD). This 1-year...

    journal_title:Scientific reports

    pub_type: 杂志文章,随机对照试验

    doi:10.1038/s41598-020-62722-4

    authors: Ludvigsson ML,Peterson G,Peolsson A

    更新日期:2020-04-21 00:00:00

  • Sea ice breakup and marine melt of a retreating tidewater outlet glacier in northeast Greenland (81°N).

    abstract::Rising temperatures in the Arctic cause accelerated mass loss from the Greenland Ice Sheet and reduced sea ice cover. Tidewater outlet glaciers represent direct connections between glaciers and the ocean where melt rates at the ice-ocean interface are influenced by ocean temperature and circulation. However, few measu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-05089-3

    authors: Bendtsen J,Mortensen J,Lennert K,K Ehn J,Boone W,Galindo V,Hu YB,Dmitrenko IA,Kirillov SA,Kjeldsen KK,Kristoffersen Y,G Barber D,Rysgaard S

    更新日期:2017-07-10 00:00:00

  • Small molecule inhibition of RAS/MAPK signaling ameliorates developmental pathologies of Kabuki Syndrome.

    abstract::Kabuki Syndrome (KS) is a rare disorder characterized by distinctive facial features, short stature, skeletal abnormalities, and neurodevelopmental deficits. Previously, we showed that loss of function of RAP1A, a RAF1 regulator, can activate the RAS/MAPK pathway and cause KS, an observation recapitulated in other gen...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-28709-y

    authors: Tsai IC,McKnight K,McKinstry SU,Maynard AT,Tan PL,Golzio C,White CT,Price DJ,Davis EE,Amrine-Madsen H,Katsanis N

    更新日期:2018-07-17 00:00:00

  • Superior Electrochemical Performance of Thin-Film Thermoplastic Elastomer-Coated SnSb as an Anode for Li-ion Batteries.

    abstract::The high failure strain of thermoplastic elastomers (TPEs) is a very desirable feature for rechargeable Li-ion batteries by improving the lifetime of high specific capacity anode materials that undergo mechanical fractures induced by large volume variations. In this work, poly(styrene-b-2-hydroxyethyl acrylate) called...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-40835-9

    authors: Tesfaye AT,Dumur F,Gigmes D,Maria S,Monconduit L,Djenizian T

    更新日期:2019-03-13 00:00:00

  • Genome-wide identification and co-expression network analysis provide insights into the roles of auxin response factor gene family in chickpea.

    abstract::Auxin response factors (ARFs) are the transcription factors that regulate auxin responses in various aspects of plant growth and development. Although genome-wide analysis of ARF gene family has been done in some species, no information is available regarding ARF genes in chickpea. In this study, we identified 28 ARF ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-11327-5

    authors: Singh VK,Rajkumar MS,Garg R,Jain M

    更新日期:2017-09-07 00:00:00

  • Mutant cohesin affects RNA polymerase II regulation in Cornelia de Lange syndrome.

    abstract::In addition to its role in sister chromatid cohesion, genome stability and integrity, the cohesin complex is involved in gene transcription. Mutations in core cohesin subunits SMC1A, SMC3 and RAD21, or their regulators NIPBL and HDAC8, cause Cornelia de Lange syndrome (CdLS). Recent evidence reveals that gene expressi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep16803

    authors: Mannini L,C Lamaze F,Cucco F,Amato C,Quarantotti V,Rizzo IM,Krantz ID,Bilodeau S,Musio A

    更新日期:2015-11-19 00:00:00

  • Transparent anti-fogging and self-cleaning TiO2/SiO2 thin films on polymer substrates using atmospheric plasma.

    abstract::Transparent anti-fogging and self-cleaning coatings are of great interest for many applications, including solar panels, windshields and displays or lenses to be used in humid environments. In this paper, we report on the simultaneous synthesis, at atmospheric pressure, of anatase TiO2 nanoparticles and low-temperatur...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-27526-7

    authors: Chemin JB,Bulou S,Baba K,Fontaine C,Sindzingre T,Boscher ND,Choquet P

    更新日期:2018-06-25 00:00:00

  • CdS quantum dots modified CuO inverse opal electrodes for ultrasensitive electrochemical and photoelectrochemical biosensor.

    abstract::The CuO inverse opal photonic crystals (IOPCs) were synthesized by the sol-gel method and modified with CdS quantum dots by successive ionic layer adsorption and reaction (SILAR). CdS QDs modified CuO IOPCs FTO electrodes of different SILAR cycles were fabricated and their electrochemical properties were studied by cy...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep10838

    authors: Xia L,Xu L,Song J,Xu R,Liu D,Dong B,Song H

    更新日期:2015-06-04 00:00:00

  • Genome scans for divergent selection in natural populations of the widespread hardwood species Eucalyptus grandis (Myrtaceae) using microsatellites.

    abstract::Identification of loci or genes under natural selection is important for both understanding the genetic basis of local adaptation and practical applications, and genome scans provide a powerful means for such identification purposes. In this study, genome-wide simple sequence repeats markers (SSRs) were used to scan f...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34941

    authors: Song Z,Zhang M,Li F,Weng Q,Zhou C,Li M,Li J,Huang H,Mo X,Gan S

    更新日期:2016-10-17 00:00:00

  • The association of blood lead levels and renal effects may be modified by genetic combinations of Metallothionein 1A 2A polymorphisms.

    abstract::Metallothionein (MT) is a protein with function of heavy metal detoxification. However, studies about how single nucleotide polymorphisms (SNPs) of MT genes influence lead nephropathy are relatively scarce. Therefore, our aim is to investigate the association between blood lead levels and renal biomarkers and to study...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66645-y

    authors: Yang CC,Lin CI,Lee SS,Wang CL,Dai CY,Chuang HY

    更新日期:2020-06-15 00:00:00

  • Why one-size-fits-all vaso-modulatory interventions fail to control glioma invasion: in silico insights.

    abstract::Gliomas are highly invasive brain tumours characterised by poor prognosis and limited response to therapy. There is an ongoing debate on the therapeutic potential of vaso-modulatory interventions against glioma invasion. Prominent vasculature-targeting therapies involve tumour blood vessel deterioration and normalisat...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep37283

    authors: Alfonso JC,Köhn-Luque A,Stylianopoulos T,Feuerhake F,Deutsch A,Hatzikirou H

    更新日期:2016-11-23 00:00:00

  • Effects of the technique and drill design used during the osteotomy on the thermal and histological stimulation.

    abstract::The objective of our in vivo study was to compare the effects of the osteotomy on the thermal alterations, the bone healing and count of polymorphonuclear cells, comparing the drill design (cylindrical or conical) using continuous or intermittent movement. Twelve rabbits were used, which were made four osteotomies (n ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-77762-z

    authors: Gehrke SA,Treichel TLE,Aramburú Júnior J,de Aza PN,Prados-Frutos JC

    更新日期:2020-11-26 00:00:00

  • Landau-Zener-Stückelberg interference in coherent charge oscillations of a one-electron double quantum dot.

    abstract::Landau-Zener (LZ) transition has received renewed interest as an alternative approach to control single-qubit states. An LZ transition occurs when a system passes through an avoided crossing that arises from quantum mechanical coupling of two levels, taking the system to a coherent superposition of the two states. The...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-23468-2

    authors: Ota T,Hitachi K,Muraki K

    更新日期:2018-04-03 00:00:00

  • Surface chemistry for cytosolic gene delivery and photothermal transgene expression by gold nanorods.

    abstract::Light-inducible gene regulation has great potential for remote and noninvasive control of the fate and function of target cells. One method to achieve such control is delivery of heat shock protein (HSP) promoter-driven protein expression vectors and photothermal heaters into the cells, followed by activation by illum...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-04912-1

    authors: Nakatsuji H,Kawabata Galbraith K,Kurisu J,Imahori H,Murakami T,Kengaku M

    更新日期:2017-07-05 00:00:00

  • Evaluation of Reanalysis Surface Incident Solar Radiation Data in China.

    abstract::Surface incident solar radiation (Rs) of reanalysis products is widely used in ecological conservation, agricultural production, civil engineering and various solar energy applications. It is of great importance to have a good knowledge of the uncertainty of reanalysis Rs products. In this study, we evaluated the Rs e...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-60460-1

    authors: Zhang X,Lu N,Jiang H,Yao L

    更新日期:2020-02-26 00:00:00

  • Berberine decreases plasma triglyceride levels and upregulates hepatic TRIB1 in LDLR wild type mice and in LDLR deficient mice.

    abstract::TRIB1 is a GWAS locus associated with plasma cholesterol and triglycerides (TG) levels. In mice, liver-specific overexpression of TRIB1 lowers plasma lipid levels. Berberine (BBR) is a natural lipid lowering drug that reduces plasma LDL-cholesterol (LDL-C), total cholesterol (TC) and TG in hyperlipidemic patients and ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-52253-y

    authors: Singh AB,Liu J

    更新日期:2019-10-30 00:00:00

  • Real-time Kinematic Positioning of INS Tightly Aided Multi-GNSS Ionospheric Constrained PPP.

    abstract::Real-time Precise Point Positioning (PPP) technique is being widely applied for providing precise positioning services with the significant improvement on satellite precise products accuracy. With the rapid development of the multi-constellation Global Navigation Satellite Systems (multi-GNSS), currently, about 80 nav...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep30488

    authors: Gao Z,Shen W,Zhang H,Niu X,Ge M

    更新日期:2016-07-29 00:00:00

  • Recombinant antibodies for specific detection of clostridial [Fe-Fe] hydrogenases.

    abstract::Biological hydrogen production is based on activity of specific enzymes called hydrogenases. Hydrogenases are oxygen sensitive metalloenzymes containing Ni and/or Fe atoms at the active site, catalyzing reversible reduction of protons. Generally, [Fe-Fe] hydrogenases prefer proton reduction to molecular hydrogen, a po...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep36034

    authors: Mangayil R,Karp M,Lamminmäki U,Santala V

    更新日期:2016-10-27 00:00:00

  • Porphyromonas gingivalis triggers the shedding of inflammatory endothelial microvesicles that act as autocrine effectors of endothelial dysfunction.

    abstract::A link between periodontitis and atherothrombosis has been highlighted. The aim of this study was to determine the influence of Porphyromonas gingivalis on endothelial microvesicles (EMVPg) shedding and their contribution to endothelial inflammation. Endothelial cells (EC) were infected with P. gingivalis (MOI = 100) ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-58374-z

    authors: Bugueno IM,Zobairi El-Ghazouani F,Batool F,El Itawi H,Anglès-Cano E,Benkirane-Jessel N,Toti F,Huck O

    更新日期:2020-02-04 00:00:00

  • Genome dynamics and evolution of Salmonella Typhi strains from the typhoid-endemic zones.

    abstract::Typhoid fever poses significant burden on healthcare systems in Southeast Asia and other endemic countries. Several epidemiological and genomic studies have attributed pseudogenisation to be the major driving force for the evolution of Salmonella Typhi although its real potential remains elusive. In the present study,...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep07457

    authors: Baddam R,Kumar N,Shaik S,Lankapalli AK,Ahmed N

    更新日期:2014-12-12 00:00:00

  • Comparative assessment of transmission-blocking vaccine candidates against Plasmodium falciparum.

    abstract::Malaria transmission-blocking vaccines (TBVs) target the development of Plasmodium parasites within the mosquito, with the aim of preventing malaria transmission from one infected individual to another. Different vaccine platforms, mainly protein-in-adjuvant formulations delivering the leading candidate antigens, have...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep11193

    authors: Kapulu MC,Da DF,Miura K,Li Y,Blagborough AM,Churcher TS,Nikolaeva D,Williams AR,Goodman AL,Sangare I,Turner AV,Cottingham MG,Nicosia A,Straschil U,Tsuboi T,Gilbert SC,Long CA,Sinden RE,Draper SJ,Hill AV,Cohuet A,

    更新日期:2015-06-11 00:00:00

  • Long-term N fertilization reduces uptake of N from fertilizer and increases the uptake of N from soil.

    abstract::Long-term supply of synthetic nitrogen (N) has the potential to affect the soil N processes. This study aimed to (i) establish N response curves to find the best balance between inputs and outputs of N over four ratoons; (ii) use 15N-labeled fertilizer to estimate the N recovery efficiency of fertilizer applied in the...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-75971-0

    authors: Joris HAW,Vitti AC,Ferraz-Almeida R,Otto R,Cantarella H

    更新日期:2020-11-02 00:00:00

  • 16S rRNA gene sequencing reveals an altered composition of the gut microbiota in chickens infected with a nephropathogenic infectious bronchitis virus.

    abstract::Infectious bronchitis virus (IBV), a member of the Coronaviridae family, causes serious losses to the poultry industry. Intestinal microbiota play an important role in chicken health and contribute to the defence against colonization by invading pathogens. The aim of this study was to investigate the link between the ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-60564-8

    authors: Xu P,Shi Y,Liu P,Yang Y,Zhou C,Li G,Luo J,Zhang C,Cao H,Hu G,Guo X

    更新日期:2020-02-26 00:00:00

  • Costunolide and dehydrocostuslactone combination treatment inhibit breast cancer by inducing cell cycle arrest and apoptosis through c-Myc/p53 and AKT/14-3-3 pathway.

    abstract::Our previous studies demonstrated that volatile oil from saussurea lappa root (VOSL), rich in two natural sesquiterpene lactones, costunolide (Cos) and dehydrocostuslactone (Dehy), exerts better anti-breast cancer efficacy and lower side effects than Cos or Dehy alone in vivo, however, their anti-cancer molecular mech...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep41254

    authors: Peng Z,Wang Y,Fan J,Lin X,Liu C,Xu Y,Ji W,Yan C,Su C

    更新日期:2017-01-24 00:00:00

  • Simultaneous laser excitation of backward volume and perpendicular standing spin waves in full-Heusler Co2FeAl0.5Si0.5 films.

    abstract::Spin-wave dynamics in full-Heusler Co2FeAl0.5Si0.5 films are studied using all-optical pump-probe magneto-optical polar Kerr spectroscopy. Backward volume magnetostatic spin-wave (BVMSW) mode is observed in films with thickness ranging from 20 to 100 nm besides perpendicular standing spin-wave (PSSW) mode, and found t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep42513

    authors: Chen Z,Yan Y,Li S,Xu X,Jiang Y,Lai T

    更新日期:2017-02-14 00:00:00

  • Roll-to-roll slot-die coating of 400 mm wide, flexible, transparent Ag nanowire films for flexible touch screen panels.

    abstract::We report fabrication of large area Ag nanowire (NW) film coated using a continuous roll-to-roll (RTR) slot die coater as a viable alternative to conventional ITO electrodes for cost-effective and large-area flexible touch screen panels (TSPs). By controlling the flow rate of shear-thinning Ag NW ink in the slot die, ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34322

    authors: Kim DJ,Shin HI,Ko EH,Kim KH,Kim TW,Kim HK

    更新日期:2016-09-28 00:00:00

  • Long-tip high-speed atomic force microscopy for nanometer-scale imaging in live cells.

    abstract::Visualization of morphological dynamics of live cells with nanometer resolution under physiological conditions is highly desired, but challenging. It has been demonstrated that high-speed atomic force microscopy is a powerful technique for visualizing dynamics of biomolecules under physiological conditions. However, a...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep08724

    authors: Shibata M,Uchihashi T,Ando T,Yasuda R

    更新日期:2015-03-04 00:00:00

  • Catalytic performance of the Ce-doped LaCoO3 perovskite nanoparticles.

    abstract::A series of La1-xCexCoO3 perovskite nanoparticles with rhombohedral phases was synthesized via sol-gel chemical process. X-ray diffraction (XRD), Transmission Electron Microscopy (TEM), Electron Diffraction Spectroscopy (EDS), Thermogravimetric Analysis (TGA), UV-Vis spectroscopy, Fourier Transform Infrared spectra (F...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-71869-z

    authors: Ansari AA,Adil SF,Alam M,Ahmad N,Assal ME,Labis JP,Alwarthan A

    更新日期:2020-09-14 00:00:00